Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing potF gene

Properties
Regulog: ArgR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: ArgR
Regulation mode: repressor (activator)
Biological process: Arginine degradation; Arginine biosynthesis
Effector: Arginine
Phylum: Proteobacteria/gamma
Built upon 502 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -239
Score: 4.13791
Sequence: ACTGATTTTTAAAGCAAG
Position: -177
Score: 3.60866
Sequence: ACTGAGTGCATATTAAAA
Locus tag: Sama_2642
Name: potF
Funciton: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2)
Locus tag: Sama_2641
Name: potG
Funciton: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2)
Locus tag: Sama_2640
Name: potH
Funciton: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2)
Locus tag: Sama_2639
Name: potI
Funciton: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2)
potF-potG-potH-potI -239 4.1 ACTGATTTTTAAAGCAAG Sama_2642
-177 3.6 ACTGAGTGCATATTAAAA
Shewanella baltica OS155
Position: -225
Score: 4.68134
Sequence: TTTGAGTGTTAATGCAAT
Locus tag: Sbal_1108
Name: potF
Funciton: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2)
Locus tag: Sbal_1109
Name: potG
Funciton: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2)
Locus tag: Sbal_1110
Name: potH
Funciton: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2)
Locus tag: Sbal_1111
Name: potI
Funciton: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2)
potF-potG-potH-potI -225 4.7 TTTGAGTGTTAATGCAAT Sbal_1108
Shewanella denitrificans OS217
Position: -266
Score: 4.86174
Sequence: AATGAGTTTTTATGCAAA
Position: -163
Score: 4.31209
Sequence: GCTGATTAATCATGCAAA
Locus tag: Sden_3031
Name: potF
Funciton: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2)
Locus tag: Sden_3030
Name: potG
Funciton: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2)
Locus tag: Sden_3029
Name: potH
Funciton: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2)
Locus tag: Sden_3028
Name: potI
Funciton: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2)
potF-potG-potH-potI -266 4.9 AATGAGTTTTTATGCAAA Sden_3031
-163 4.3 GCTGATTAATCATGCAAA
Shewanella frigidimarina NCIMB 400
Position: -249
Score: 3.86863
Sequence: ACTGAATGATTATTGCAA
Position: -228
Score: 4.01395
Sequence: AGTGATTTTTTAACCAAT
Locus tag: Sfri_3009
Name: potF
Funciton: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2)
Locus tag: Sfri_3008
Name: potG
Funciton: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2)
Locus tag: Sfri_3007
Name: potH
Funciton: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2)
Locus tag: Sfri_3006
Name: potI
Funciton: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2)
potF-potG-potH-potI -249 3.9 ACTGAATGATTATTGCAA Sfri_3009
-228 4 AGTGATTTTTTAACCAAT
Shewanella loihica PV-4
Position: -179
Score: 4.23673
Sequence: ATTAGATATAAATTCATA
Locus tag: Shew_0973
Name: potF
Funciton: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2)
Locus tag: Shew_0974
Name: potG
Funciton: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2)
Locus tag: Shew_0975
Name: potH
Funciton: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2)
Locus tag: Shew_0976
Name: potI
Funciton: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2)
potF-potG-potH-potI -179 4.2 ATTAGATATAAATTCATA Shew_0973
Shewanella oneidensis MR-1
Position: -226
Score: 4.16868
Sequence: TTTGCTTGTTAATGCAAG
Locus tag: SO_1270
Name: potF
Funciton: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2)
Locus tag: SO_1271
Name: potG
Funciton: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2)
Locus tag: SO_1272
Name: potH
Funciton: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2)
Locus tag: SO_1273
Name: potI
Funciton: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2)
potF-potG-potH-potI -226 4.2 TTTGCTTGTTAATGCAAG SO_1270
Shewanella putrefaciens CN-32
Position: -230
Score: 4.56209
Sequence: TATGATTGATAATGCAAT
Locus tag: Sputcn32_1094
Name: potF
Funciton: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2)
Locus tag: Sputcn32_1095
Name: potG
Funciton: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2)
Locus tag: Sputcn32_1096
Name: potH
Funciton: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2)
Locus tag: Sputcn32_1097
Name: potI
Funciton: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2)
potF-potG-potH-potI -230 4.6 TATGATTGATAATGCAAT Sputcn32_1094
Shewanella sediminis HAW-EB3
Position: -257
Score: 3.90094
Sequence: TGTGACTGACGATTCAAT
Locus tag: Ssed_1061
Name: potF
Funciton: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2)
Locus tag: Ssed_1062
Name: potG
Funciton: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2)
Locus tag: Ssed_1063
Name: potH
Funciton: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2)
Locus tag: Ssed_1064
Name: potI
Funciton: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2)
potF-potG-potH-potI -257 3.9 TGTGACTGACGATTCAAT Ssed_1061
Shewanella sp ANA-3
Position: -376
Score: 3.92915
Sequence: TTTGAAATCCCATTCAAT
Position: -164
Score: 4.24206
Sequence: ACTGCTTGTTAATGCAAG
Locus tag: Shewana3_3097
Name: potF
Funciton: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2)
Locus tag: Shewana3_3096
Name: potG
Funciton: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2)
Locus tag: Shewana3_3095
Name: potH
Funciton: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2)
Locus tag: Shewana3_3094
Name: potI
Funciton: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2)
potF-potG-potH-potI -376 3.9 TTTGAAATCCCATTCAAT Shewana3_3097
-164 4.2 ACTGCTTGTTAATGCAAG
Shewanella sp MR-4
Position: -427
Score: 4.42391
Sequence: AGTGCTTTTAAATTGAAA
Position: -375
Score: 4.23641
Sequence: TGTGAAATCTCATTCAAT
Position: -164
Score: 4.16868
Sequence: TGTGCTTGTTAATGCAAG
Locus tag: Shewmr4_2918
Name: potF
Funciton: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2)
Locus tag: Shewmr4_2917
Name: potG
Funciton: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2)
Locus tag: Shewmr4_2916
Name: potH
Funciton: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2)
Locus tag: Shewmr4_2915
Name: potI
Funciton: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2)
potF-potG-potH-potI -427 4.4 AGTGCTTTTAAATTGAAA Shewmr4_2918
-375 4.2 TGTGAAATCTCATTCAAT
-164 4.2 TGTGCTTGTTAATGCAAG
Shewanella sp MR-7
Position: -427
Score: 4.42391
Sequence: AGTGCTTTTAAATTGAAA
Position: -375
Score: 4.23641
Sequence: TGTGAAATCTCATTCAAT
Position: -164
Score: 4.16868
Sequence: TGTGCTTGTTAATGCAAG
Locus tag: Shewmr7_3000
Name: potF
Funciton: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2)
Locus tag: Shewmr7_2999
Name: potG
Funciton: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2)
Locus tag: Shewmr7_2998
Name: potH
Funciton: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2)
Locus tag: Shewmr7_2997
Name: potI
Funciton: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2)
potF-potG-potH-potI -427 4.4 AGTGCTTTTAAATTGAAA Shewmr7_3000
-375 4.2 TGTGAAATCTCATTCAAT
-164 4.2 TGTGCTTGTTAATGCAAG
Shewanella sp W3-18-1
Position: -230
Score: 4.56209
Sequence: TATGATTGATAATGCAAT
Locus tag: Sputw3181_3070
Name: potF
Funciton: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2)
Locus tag: Sputw3181_3069
Name: potG
Funciton: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2)
Locus tag: Sputw3181_3068
Name: potH
Funciton: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2)
Locus tag: Sputw3181_3067
Name: potI
Funciton: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2)
potF-potG-potH-potI -230 4.6 TATGATTGATAATGCAAT Sputw3181_3070
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