Regulon of ArgR in Shewanella baltica OS155

Properties
Regulator type:	Transcription factor
TF locus tag:	Sbal_0608
Regulator family:	ArgR
Regulation mode:	repressor (activator)
Biological process:	Arginine degradation; Arginine biosynthesis
Effector:	Arginine
Regulog:	ArgR - Shewanellaceae
Statistics of regulated genes:
- Genes	37
- Operons	21
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 502 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - ArgR
By TF family - ArgR
By effector - Arginine
By pathway - Arginine degradation
By pathway - Arginine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -99 Score: 5 Sequence: AATGAATTTTTAATCAAA Position: -78 Score: 4 Sequence: ACAGCATAATTATTGACA Locus tag: Sbal_3392 Name: artI Funciton: Arginine ABC transporter, substrate-binding protein Locus tag: Sbal_3393 Name: artQ Funciton: Arginine ABC transporter, permease protein Locus tag: Sbal_3394 Name: artM Funciton: Arginine ABC transporter, ATP-binding protein
	Sbal_3392	artI	Arginine ABC transporter, substrate-binding protein
	Sbal_3393	artQ	Arginine ABC transporter, permease protein
	Sbal_3394	artM	Arginine ABC transporter, ATP-binding protein
Position: -84 Score: 4.9 Sequence: TTTGAATGAACATTCAAA Position: -33 Score: 4.2 Sequence: CTTGAATGCATATTCAAG Locus tag: Sbal_1249 Name: SO3392 Funciton: NADH-dependent flavin oxidoreductase, Oye family
	Sbal_1249	SO3392	NADH-dependent flavin oxidoreductase, Oye family
Position: -471 Score: 4.2 Sequence: ATTCAATATAAATGCGAA Position: -252 Score: 4 Sequence: TAAAAATATATATTCACA Position: -130 Score: 3.8 Sequence: AGTGAATAAAATAACAAC Locus tag: Sbal_4124 Name: argC Funciton: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
	Sbal_4124	argC	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
Position: -118 Score: 3.8 Sequence: AATGAGAATAAATTCTTT Position: -97 Score: 5.5 Sequence: TGTGAATTAAAATGCAAT Locus tag: Sbal_0380 Name: argA Funciton: N-acetylglutamate synthase (EC 2.3.1.1)
	Sbal_0380	argA	N-acetylglutamate synthase (EC 2.3.1.1)
Position: -121 Score: 4.9 Sequence: ATTGAATGGTTATTCATA Locus tag: Sbal_2816 Name: SO1915 Funciton: Serine protease, subtilase family
	Sbal_2816	SO1915	Serine protease, subtilase family
Position: -189 Score: 5.4 Sequence: GTTGAATTTATATTCACA Locus tag: Sbal_2779 Name: aprE Funciton: Alkaline serine protease
	Sbal_2779	aprE	Alkaline serine protease
Position: -112 Score: 4.8 Sequence: AACGCATTTAAATTCACA Locus tag: Sbal_0045 Name: SO4732 Funciton: Conserved hypothetical protein
	Sbal_0045	SO4732	Conserved hypothetical protein
Position: -332 Score: 5.2 Sequence: GATGAATTTATATGCATA Position: -311 Score: 4.5 Sequence: AATAAATTTCAATGCATT Locus tag: Sbal_0274 Name: mcp(Arg) Funciton: Methyl-accepting chemotaxis protein
	Sbal_0274	mcp(Arg)	Methyl-accepting chemotaxis protein
Position: -749 Score: 4.2 Sequence: TATGCATAACCATGCAGG Locus tag: Sbal_4084 Name: speF Funciton: Ornithine decarboxylase (EC 4.1.1.17) Locus tag: Sbal_4085 Name: potE Funciton: Putrescine/proton symporter, putrescine/ornithine antiporter PotE Locus tag: Sbal_4086 Name: SO0312 Funciton: Predicted outer membrane porin
	Sbal_4084	speF	Ornithine decarboxylase (EC 4.1.1.17)
	Sbal_4085	potE	Putrescine/proton symporter, putrescine/ornithine antiporter PotE
	Sbal_4086	SO0312	Predicted outer membrane porin
Position: -225 Score: 4.7 Sequence: TTTGAGTGTTAATGCAAT Locus tag: Sbal_1108 Name: potF Funciton: Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2) Locus tag: Sbal_1109 Name: potG Funciton: Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2) Locus tag: Sbal_1110 Name: potH Funciton: Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2) Locus tag: Sbal_1111 Name: potI Funciton: Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2)
	Sbal_1108	potF	Putrescine ABC transporter, substrate-binding protein (TC 3.A.1.11.2)
	Sbal_1109	potG	Putrescine ABC transporter, ATP-binding protein (TC 3.A.1.11.2)
	Sbal_1110	potH	Putrescine ABC transporter, permease protein 1 (TC 3.A.1.11.2)
	Sbal_1111	potI	Putrescine ABC transporter, permease protein 2 (TC 3.A.1.11.2)
Position: -137 Score: 3.6 Sequence: CATGCATAATCAGTTAAT Position: -71 Score: 4.6 Sequence: ACTGTATATAAAATCAGT Position: -49 Score: 3.7 Sequence: ACTGTTTATCAATACAGT Locus tag: Sbal_3153 Name: recN Funciton: DNA repair protein RecN
	Sbal_3153	recN	DNA repair protein RecN
Position: -25 Score: 4.7 Sequence: AATGAAAATAAATTCAGG Locus tag: Sbal_2620 Name: ggt2 Funciton: Gamma-glutamyltranspeptidase (EC 2.3.2.2)
	Sbal_2620	ggt2	Gamma-glutamyltranspeptidase (EC 2.3.2.2)
Position: -247 Score: 3.9 Sequence: TATGACTAATTATGCTGA Locus tag: Sbal_0571 Name: astC Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81) Locus tag: Sbal_0572 Name: astA Funciton: Arginine N-succinyltransferase (EC 2.3.1.109) Locus tag: Sbal_0573 Name: astD Funciton: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) Locus tag: Sbal_0574 Name: SO0620 Funciton: Conserved hypothetical protein
	Sbal_0571	astC	Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
	Sbal_0572	astA	Arginine N-succinyltransferase (EC 2.3.1.109)
	Sbal_0573	astD	Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
	Sbal_0574	SO0620	Conserved hypothetical protein
Position: -226 Score: 4 Sequence: AGTCACTTTTTAATCAAA Position: -132 Score: 3.6 Sequence: TATGCATTTATCGTGAAA Position: -40 Score: 3.6 Sequence: TATGAACAAATAATAACT Locus tag: Sbal_2497 Name: astB Funciton: Succinylarginine dihydrolase (EC 3.5.3.23)
	Sbal_2497	astB	Succinylarginine dihydrolase (EC 3.5.3.23)
Position: -60 Score: 4.9 Sequence: AATGCATAAAGATTCATT Locus tag: Sbal_4123 Name: argB Funciton: Acetylglutamate kinase (EC 2.7.2.8) Locus tag: Sbal_4122 Name: argF Funciton: Ornithine carbamoyltransferase (EC 2.1.3.3) Locus tag: Sbal_4121 Name: argG Funciton: Argininosuccinate synthase (EC 6.3.4.5) Locus tag: Sbal_4120 Name: argH Funciton: Argininosuccinate lyase (EC 4.3.2.1)
	Sbal_4123	argB	Acetylglutamate kinase (EC 2.7.2.8)
	Sbal_4122	argF	Ornithine carbamoyltransferase (EC 2.1.3.3)
	Sbal_4121	argG	Argininosuccinate synthase (EC 6.3.4.5)
	Sbal_4120	argH	Argininosuccinate lyase (EC 4.3.2.1)
Position: -99 Score: 5.2 Sequence: GTTGAATTTAAATGCACC Locus tag: Sbal_3205 Name: argW Funciton: Predicted arginine uptake transporter, COG3314 family
	Sbal_3205	argW	Predicted arginine uptake transporter, COG3314 family
Position: -361 Score: 5.3 Sequence: AATGAATAATAATTCAAC Position: -315 Score: 4.3 Sequence: TTTGCAATAAAAATCACT Locus tag: Sbal_1178 Name: gltB Funciton: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Locus tag: Sbal_1177 Name: gltD Funciton: Glutamate synthase [NADPH] small chain (EC 1.4.1.13)
	Sbal_1178	gltB	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
	Sbal_1177	gltD	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)
Position: -444 Score: 4.1 Sequence: AATGCATTTGCAATCAAC Position: -192 Score: 3.9 Sequence: AATAACTTATAAATCACT Position: -171 Score: 4.9 Sequence: AGTGCATAATAATACACT Locus tag: Sbal_1741 Name: SO2753 Funciton: Prolyl endopeptidase (EC 3.4.21.26)
	Sbal_1741	SO2753	Prolyl endopeptidase (EC 3.4.21.26)
Position: -487 Score: 3.8 Sequence: TTTGCATAAATATTACAA Position: -390 Score: 3.5 Sequence: TGTCTATAGCTATGCATT Locus tag: Sbal_2044 Name: omp(Arg) Funciton: TonB-dependent receptor
	Sbal_2044	omp(Arg)	TonB-dependent receptor
Position: -96 Score: 5.5 Sequence: AGTGAATTTTTATTCAAC Locus tag: Sbal_0608 Name: argR Funciton: Arginine metabolism transcriptional regulator ArgR
	Sbal_0608	argR	Arginine metabolism transcriptional regulator ArgR
Position: -139 Score: 4.9 Sequence: TGTGATTTTTTATTCAAA Locus tag: Sbal_1024 Name: oadG Funciton: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) Locus tag: Sbal_1025 Name: oadA Funciton: Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3) Locus tag: Sbal_1026 Name: oadB Funciton: Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3)
	Sbal_1024	oadG	Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
	Sbal_1025	oadA	Oxaloacetate decarboxylase, alpha chain (EC 4.1.1.3)
	Sbal_1026	oadB	Oxaloacetate decarboxylase, beta chain (EC 4.1.1.3)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of ArgR in Shewanella baltica OS155

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --