Regulog CtsR - Streptococcaceae

Member of regulog collections
- By taxonomy - Streptococcaceae
- By TF family - CtsR
- By effector - Heat shock
- By pathway - Heat shock response
Genes | Function | |||||||||||||||
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CRON 1. | ||||||||||||||||
clpB |
*
Lactococcus lactis subsp. cremoris SK11 Site: position = -98 score = 6.25715 sequence = AAAAGCTTGACCATTACTGACTAA Gene: LACR_1612: ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones |
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Lactococcus lactis subsp. lactis Il1403 Site: position = -98 score = 6.52833 sequence = AAAAGTTTGACCATTACTGACCAA Gene: L166407: ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones |
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ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones |
CRON 2. | ||||||||||||||||
groS |
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Lactococcus lactis subsp. cremoris SK11 Site: position = -95 score = 5.92574 sequence = TTTCTCTTGACTAAATCTGACCAT Gene: LACR_0439: Heat shock protein 60 family co-chaperone GroES |
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Lactococcus lactis subsp. lactis Il1403 Site: position = -96 score = 5.92574 sequence = TTTCTCTTGACTAAATCTGACCAT Gene: L198515: Heat shock protein 60 family co-chaperone GroES |
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Streptococcus agalactiae 2603V/R Site: position = -109 score = 6.34428 sequence = TTTCTCTTGACTAATTCTGACCAA Gene: SAG2075: Heat shock protein 60 family co-chaperone GroES |
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Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -106 score = 6.86088 sequence = TTTTTCTTGACTATTTTTGACCAA Gene: SDEG_2041: Heat shock protein 60 family co-chaperone GroES |
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Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -110 score = 6.86088 sequence = TTTTTCTTGACTATTTTTGACCAA Gene: Sez_0145: Heat shock protein 60 family co-chaperone GroES |
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Streptococcus gallolyticus UCN34 Site: position = -134 score = 6.76219 sequence = TTTTTCTTGACTATTTCTGACCAA Gene: GALLO_0124: Heat shock protein 60 family co-chaperone GroES |
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Streptococcus gordonii str. Challis substr. CH1 Site: position = -96 score = 6.86088 sequence = TTTTTCTTGACTATTTTTGACCAA Gene: SGO_1886: Heat shock protein 60 family co-chaperone GroES |
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Streptococcus mitis B6 Site: position = -102 score = 6.76219 sequence = TTTTTCTTGACTATTTCTGACCAA Gene: smi_0481: Heat shock protein 60 family co-chaperone GroES |
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Streptococcus mutans UA159 Site: position = -91 score = 6.86088 sequence = TTTTTCTTGACTATTTTTGACCAA Gene: SMU.1955: Heat shock protein 60 family co-chaperone GroES |
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Streptococcus pneumoniae TIGR4 Site: position = -102 score = 6.23751 sequence = TTTTTCTTGATTATTTCTGACCAA Gene: SP_1907: Heat shock protein 60 family co-chaperone GroES |
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Streptococcus pyogenes M1 GAS Site: position = -107 score = 6.86088 sequence = TTTTTCTTGACTATTTTTGACCAA Gene: SPy2072: Heat shock protein 60 family co-chaperone GroES |
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Streptococcus sanguinis SK36 Site: position = -97 score = 6.76219 sequence = TTTTTCTTGACTATTTCTGACCAA Gene: SSA_0225: Heat shock protein 60 family co-chaperone GroES |
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Streptococcus suis 05ZYH33 Site: position = -66 score = 6.48664 sequence = ATGTTCTTGACTATTTTTGACCAA Gene: SSU05_0147: Heat shock protein 60 family co-chaperone GroES |
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Streptococcus thermophilus CNRZ1066 Site: position = -124 score = 6.6754 sequence = TTTTTCTTGACTATTTTTGACTAA Gene: str0203: Heat shock protein 60 family co-chaperone GroES |
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Streptococcus uberis 0140J Site: position = -108 score = 6.59261 sequence = TTTTTCTTGACTAATTTTGACCAA Gene: SUB1742: Heat shock protein 60 family co-chaperone GroES |
Heat shock protein 60 family co-chaperone GroES |
groL |
Gene: LACR_0440: Heat shock protein 60 family chaperone GroEL |
Gene: L198893: Heat shock protein 60 family chaperone GroEL |
Gene: SAG2074: Heat shock protein 60 family chaperone GroEL |
Gene: SDEG_2040: Heat shock protein 60 family chaperone GroEL |
Gene: Sez_0146: Heat shock protein 60 family chaperone GroEL |
Gene: GALLO_0125: Heat shock protein 60 family chaperone GroEL |
Gene: SGO_1885: Heat shock protein 60 family chaperone GroEL |
Gene: smi_0482: Heat shock protein 60 family chaperone GroEL |
Gene: SMU.1954: Heat shock protein 60 family chaperone GroEL |
Gene: SP_1906: Heat shock protein 60 family chaperone GroEL |
Gene: SPy2070: Heat shock protein 60 family chaperone GroEL |
Gene: SSA_0226: Heat shock protein 60 family chaperone GroEL |
2
Streptococcus suis 05ZYH33 Gene: SSU05_0148: Heat shock protein 60 family chaperone GroEL Gene: SSU05_0149: Heat shock protein 60 family chaperone GroEL |
Gene: str0204: Heat shock protein 60 family chaperone GroEL |
Gene: SUB1741: Heat shock protein 60 family chaperone GroEL |
Heat shock protein 60 family chaperone GroEL |
CRON 3. | ||||||||||||||||
ctsR |
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Lactococcus lactis subsp. cremoris SK11 Site: position = -56 score = 0.423713 sequence = ATAGTCAGTAATAGTCAAAGATTA Gene: LACR_0665: Stress and heat shock response transcriptional regulator CtsR, CtsR family |
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Lactococcus lactis subsp. lactis Il1403 Site: position = -56 score = 0.423713 sequence = ATAGTCAGTAATAGTCAAAGATTA Gene: L0223: Stress and heat shock response transcriptional regulator CtsR, CtsR family |
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Streptococcus agalactiae 2603V/R Site: position = -36 score = -0.674182 sequence = ATAGTCAGTTATAGTCAAAGAGGA Gene: SAG1829: Stress and heat shock response transcriptional regulator CtsR, CtsR family |
Gene: SDEG_2043: Stress and heat shock response transcriptional regulator CtsR, CtsR family |
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Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -69 score = 0.792732 sequence = TTAGTCAGTTTTAGTCAAAAATAA Gene: Sez_0139: Stress and heat shock response transcriptional regulator CtsR, CtsR family |
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Streptococcus gallolyticus UCN34 Site: position = -66 score = -0.346024 sequence = ATAGTCAGTTATAGTCAAAGATAG Gene: GALLO_2164: Stress and heat shock response transcriptional regulator CtsR, CtsR family |
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Streptococcus gordonii str. Challis substr. CH1 Site: position = -110 score = 0.453539 sequence = TTAGTCAAAGATAGTCAATGTCAA Gene: SGO_1999: Stress and heat shock response transcriptional regulator CtsR, CtsR family |
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Streptococcus mitis B6 Site: position = -44 score = 0.423713 sequence = ATAGTCAAAGATAGTCAAGGTTTA Gene: smi_2046: Stress and heat shock response transcriptional regulator CtsR, CtsR family |
Gene: SMU.2030: Stress and heat shock response transcriptional regulator CtsR, CtsR family |
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Streptococcus pneumoniae TIGR4 Site: position = -44 score = -0.429284 sequence = ATAGTCAAACAAGGTCAAGGTTTA Gene: SP_2195: Stress and heat shock response transcriptional regulator CtsR, CtsR family |
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Streptococcus pyogenes M1 GAS Site: position = -78 score = 0.112844 sequence = ATAGTCAGTTTTAGTCAAAATGTA Gene: SPy2074: Stress and heat shock response transcriptional regulator CtsR, CtsR family |
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Streptococcus sanguinis SK36 Site: position = -77 score = -0.221117 sequence = TTAGTCAAAGATAGTCAATGTTAG Gene: SSA_2200: Stress and heat shock response transcriptional regulator CtsR, CtsR family |
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Streptococcus suis 05ZYH33 Site: position = -34 score = -0.875808 sequence = ATGGTCAAAGATAGTCAAAGAAAG Gene: SSU05_1976: Stress and heat shock response transcriptional regulator CtsR, CtsR family |
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Streptococcus thermophilus CNRZ1066 Site: position = -38 score = -0.674182 sequence = ATAGTCAGTTATAGTCAAATTAGA Gene: str0076: Stress and heat shock response transcriptional regulator CtsR, CtsR family |
Gene: SUB1744: Stress and heat shock response transcriptional regulator CtsR, CtsR family |
Stress and heat shock response transcriptional regulator CtsR, CtsR family |
clpC |
Gene: LACR_0666: ATP-dependent Clp protease ATP-binding subunit ClpC |
Gene: L0222: ATP-dependent Clp protease ATP-binding subunit ClpC |
Gene: SAG1828: ATP-dependent Clp protease ATP-binding subunit ClpC |
Gene: SDEG_2042: ATP-dependent Clp protease ATP-binding subunit ClpC |
Gene: Sez_0140: ATP-dependent Clp protease ATP-binding subunit ClpC |
Gene: GALLO_2163: ATP-dependent Clp protease ATP-binding subunit ClpC |
Gene: SGO_1998: ATP-dependent Clp protease ATP-binding subunit ClpC |
Gene: smi_2045: ATP-dependent Clp protease ATP-binding subunit ClpC |
Gene: SMU.2029: ATP-dependent Clp protease ATP-binding subunit ClpC |
Gene: SP_2194: ATP-dependent Clp protease ATP-binding subunit ClpC |
Gene: SPy2073: ATP-dependent Clp protease ATP-binding subunit ClpC |
Gene: SSA_2199: ATP-dependent Clp protease ATP-binding subunit ClpC |
Gene: SSU05_1975: ATP-dependent Clp protease ATP-binding subunit ClpC |
Gene: str0077: ATP-dependent Clp protease ATP-binding subunit ClpC |
Gene: SUB1743: ATP-dependent Clp protease ATP-binding subunit ClpC |
ATP-dependent Clp protease ATP-binding subunit ClpC |
CRON 4. | ||||||||||||||||
clpL |
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Streptococcus agalactiae 2603V/R Site: position = -144 score = 6.29907 sequence = TATTTATTGACCTTTACTGACTAA Gene: SAG1303: ATP-dependent Clp protease, ATP-binding subunit |
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Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -180 score = 6.42288 sequence = TTTTGTTTGACCTTAACTGACCAA Gene: SDEG_0851: ATP-dependent Clp protease, ATP-binding subunit |
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Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -181 score = 6.29035 sequence = TTTTGTTTGACCTTTACTGACCTT Gene: Sez_1072: ATP-dependent Clp protease, ATP-binding subunit |
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Streptococcus gallolyticus UCN34 Site: position = -190 score = 6.55594 sequence = AAATATTTGACTTTTACTGACCAA Gene: GALLO_1249: ATP-dependent Clp protease, ATP-binding subunit |
Gene: SGO_1856: ATP-dependent Clp protease, ATP-binding subunit |
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Streptococcus mitis B6 Site: position = -276 score = 6.31165 sequence = AAATCCTTGACCTTTTCTGACTAA Gene: smi_1765: ATP-dependent Clp protease, ATP-binding subunit |
Gene: SMU.956: ATP-dependent Clp protease, ATP-binding subunit |
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Streptococcus pneumoniae TIGR4 Site: position = -275 score = 6.514 sequence = AAACTCTTGACCTTTTCTGACCAA Gene: SP_0338: ATP-dependent Clp protease, ATP-binding subunit |
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Streptococcus pyogenes M1 GAS Site: position = -172 score = 6.29035 sequence = TTTTGTTTGACCTTTACTGACCTT Gene: SPy0888: ATP-dependent Clp protease, ATP-binding subunit |
Gene: SSA_2096: ATP-dependent Clp protease, ATP-binding subunit |
*3
Streptococcus suis 05ZYH33 Site: position = -254 score = 6.14037 sequence = AAACTATTGACTTTTACTGACCAA Gene: SSU05_0389: ATP-dependent Clp protease, ATP-binding subunit Gene: SSU05_0390: ATP-dependent Clp protease, ATP-binding subunit Gene: SSU05_0391: ATP-dependent Clp protease, ATP-binding subunit |
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Streptococcus thermophilus CNRZ1066 Site: position = -84 score = -0.0822352 sequence = TTGGTCAGTAAAAGTCAATTTTTA Gene: str1614: ATP-dependent Clp protease, ATP-binding subunit |
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Streptococcus uberis 0140J Site: position = -152 score = 6.88339 sequence = TTTTTCTTGACCTTTTTTGACCAA Gene: SUB0776: ATP-dependent Clp protease, ATP-binding subunit |
ATP-dependent Clp protease, ATP-binding subunit |
CRON 5. | ||||||||||||||||
yffA |
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Lactococcus lactis subsp. cremoris SK11 Site: position = -119 score = -0.38974 sequence = ATGGTCAAATATGGTCAAGCTTTT Gene: LACR_0577: Hypothetical protein |
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Lactococcus lactis subsp. lactis Il1403 Site: position = -117 score = -0.914416 sequence = ATGGTCAAATATGGTCAAACTTTT Gene: L150017: Hypothetical protein |
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Hypothetical protein |
clpE |
Gene: LACR_0578: ATP-dependent Clp protease, ATP-binding subunit ClpE |
Gene: L0221: ATP-dependent Clp protease, ATP-binding subunit ClpE |
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Streptococcus agalactiae 2603V/R Site: position = -65 score = 6.25458 sequence = TAAAGTTTGACTATATTTGACTAT Gene: SAG0488: ATP-dependent Clp protease, ATP-binding subunit ClpE |
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Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -62 score = 6.71234 sequence = TAAAGTTTGACCATTTTTGACTAA Gene: SDEG_1496: ATP-dependent Clp protease, ATP-binding subunit ClpE |
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Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -63 score = 6.71234 sequence = TAAAGTTTGACCATTTTTGACTAA Gene: Sez_0605: ATP-dependent Clp protease, ATP-binding subunit ClpE |
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Streptococcus gallolyticus UCN34 Site: position = -65 score = 5.69378 sequence = TGAAGTTTGACTATCTTTGACCTT Gene: GALLO_0612: ATP-dependent Clp protease, ATP-binding subunit ClpE |
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Streptococcus gordonii str. Challis substr. CH1 Site: position = -65 score = 6.8586 sequence = TAAAGTTTGACTATTTTTGACCAA Gene: SGO_0688: ATP-dependent Clp protease, ATP-binding subunit ClpE |
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Streptococcus mitis B6 Site: position = -62 score = 6.27038 sequence = TAGAATTTGACTATTTTTGACCTT Gene: smi_0865: ATP-dependent Clp protease, ATP-binding subunit ClpE |
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Streptococcus mutans UA159 Site: position = -74 score = 6.59844 sequence = TAAAGTTTGACCATTATTGACCAT Gene: SMU.562: ATP-dependent Clp protease, ATP-binding subunit ClpE |
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Streptococcus pneumoniae TIGR4 Site: position = -62 score = 6.27038 sequence = TAGAATTTGACTATTTTTGACCTT Gene: SP_0820: ATP-dependent Clp protease, ATP-binding subunit ClpE |
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Streptococcus pyogenes M1 GAS Site: position = -62 score = 6.71234 sequence = TAAAGTTTGACCATTTTTGACTAA Gene: SPy1509: ATP-dependent Clp protease, ATP-binding subunit ClpE |
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Streptococcus sanguinis SK36 Site: position = -73 score = 6.20615 sequence = AAAACTTTGACTATTTTTGACCTT Gene: SSA_0669: ATP-dependent Clp protease, ATP-binding subunit ClpE |
Gene: SSU05_0492: ATP-dependent Clp protease, ATP-binding subunit ClpE |
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Streptococcus thermophilus CNRZ1066 Site: position = -75 score = 6.52277 sequence = ATAGATTTGACCTTTTTTGACCAA Gene: str0602: ATP-dependent Clp protease, ATP-binding subunit ClpE |
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Streptococcus uberis 0140J Site: position = -61 score = 6.71234 sequence = TAAAGTTTGACCATTTTTGACTAA Gene: SUB1281: ATP-dependent Clp protease, ATP-binding subunit ClpE |
ATP-dependent Clp protease, ATP-binding subunit ClpE |
CRON 6. | ||||||||||||||||
clpP |
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Lactococcus lactis subsp. cremoris SK11 Site: position = -110 score = 6.80258 sequence = TTTTCTTTGACCTTTTTTGACCAA Gene: LACR_0700: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Lactococcus lactis subsp. lactis Il1403 Site: position = -110 score = 6.83684 sequence = TATTCTTTGACCTTTTTTGACCAA Gene: L72391: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Streptococcus agalactiae 2603V/R Site: position = -67 score = 6.6062 sequence = TATTATTTGACCTTTGTTGACCAA Gene: SAG1585: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Streptococcus dysgalactiae subsp. equisimilis GGS_124 Site: position = -125 score = 6.45657 sequence = TATCATTTGACCTTTCTTGACCAA Gene: SDEG_0439: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Streptococcus equi subsp. zooepidemicus MGCS10565 Site: position = -93 score = 6.84544 sequence = TATCATTTGACCTTTTTTGACCAA Gene: Sez_1614: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Streptococcus gallolyticus UCN34 Site: position = -127 score = 6.96082 sequence = TTTTATTTGACCTTTTTTGACCAA Gene: GALLO_1763: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Streptococcus gordonii str. Challis substr. CH1 Site: position = -103 score = 6.63859 sequence = AAAAATTTGACCTTTATTGACCAA Gene: SGO_1632: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Streptococcus mitis B6 Site: position = -89 score = 6.78449 sequence = AAAAATTTGACCTTTTTTGACCAA Gene: smi_1417: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Streptococcus mutans UA159 Site: position = -68 score = 6.83975 sequence = AAATATTTGACCTTTTTTGACCAA Gene: SMU.1672: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Streptococcus pneumoniae TIGR4 Site: position = -89 score = 6.78449 sequence = AAAAATTTGACCTTTTTTGACCAA Gene: SP_0746: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Streptococcus pyogenes M1 GAS Site: position = -125 score = 6.56646 sequence = TATGATTTGACCTTTATTGACCAA Gene: SPy0395: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Streptococcus sanguinis SK36 Site: position = -103 score = 6.61783 sequence = TTCTATTTGACCTTTTTTGACCAA Gene: SSA_1731: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
*2
Streptococcus suis 05ZYH33 Site: position = -67 score = 6.10436 sequence = TTTTTATTGACCAATTTTGACTAT Gene: SSU05_1551: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) Gene: SSU05_1550: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Streptococcus thermophilus CNRZ1066 Site: position = -67 score = 6.242 sequence = TTTTATTTGACCTAATTTGACTAA Gene: str0356: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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Streptococcus uberis 0140J Site: position = -98 score = 6.73002 sequence = TATTATTTGACCTTATTTGACCAA Gene: SUB0429: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |