Regulog CodY - Bacillales

Properties
Regulator type:	Transcription factor
Regulator family:	CodY
Regulation mode:
Biological process:	Amino acid metabolism
Effector:	Guanosine triphosphate; Branched-chain amino acids
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 445 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By TF family - CodY
By effector - Guanosine triphosphate
By effector - Branched-chain amino acids
By pathway - Amino acid metabolism

Statistics of regulated genes
Genome	Genes	Operons
Bacillus subtilis subsp. subtilis str. 168	151	73
Bacillus amyloliquefaciens FZB42	146	70
Bacillus pumilus SAFR-032	88	47
Bacillus licheniformis DSM 13	98	59
Anoxybacillus flavithermus WK1	65	38
Geobacillus kaustophilus HTA426	34	16
Bacillus cereus ATCC 14579	53	35
Bacillus halodurans C-125	40	21
Bacillus clausii KSM-K16	12	8
Oceanobacillus iheyensis HTE831	50	25
Paenibacillus sp. JDR-2	21	6

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
ilvD	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -64 score = 4.53834 sequence = AATAAACTGAAAATT Gene: BSU21870: Dihydroxy-acid dehydratase (EC 4.2.1.9)	* Bacillus amyloliquefaciens FZB42 Site: position = -56 score = 4.53834 sequence = AATAAACTGAAAATT Gene: RBAM_020010: Dihydroxy-acid dehydratase (EC 4.2.1.9)	* Bacillus pumilus SAFR-032 Site: position = -83 score = 4.53834 sequence = AATAAACAGAAAATT Gene: BPUM_1922: Dihydroxy-acid dehydratase (EC 4.2.1.9)	* Bacillus licheniformis DSM 13 Site: position = -51 score = 4.83892 sequence = AATATTCAGAATATA Gene: BLi02324: Dihydroxy-acid dehydratase (EC 4.2.1.9)	Anoxybacillus flavithermus WK1 Gene: Aflv_1238: Dihydroxy-acid dehydratase (EC 4.2.1.9)	Geobacillus kaustophilus HTA426 Gene: GK2046: Dihydroxy-acid dehydratase (EC 4.2.1.9)	Bacillus cereus ATCC 14579 Gene: BC1780: Dihydroxy-acid dehydratase (EC 4.2.1.9)	* Bacillus halodurans C-125 Site: position = -111 score = 4.53832 sequence = TATTTTTTGACTATT Site: position = -217 score = 4.30344 sequence = AATAGTCAAATTATT Gene: BH3062: Dihydroxy-acid dehydratase (EC 4.2.1.9)	Bacillus clausii KSM-K16 Gene: ABC2646: Dihydroxy-acid dehydratase (EC 4.2.1.9)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_4335: Dihydroxy-acid dehydratase (EC 4.2.1.9)	Dihydroxy-acid dehydratase (EC 4.2.1.9)

CRON 2.
yhaA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -57 score = 4.37777 sequence = AATATTCAGACTTTT Gene: BSU10070: N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)	* Bacillus amyloliquefaciens FZB42 Site: position = -57 score = 4.23451 sequence = AATCTTCTGACATTT Gene: RBAM_010310: N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)	* Bacillus pumilus SAFR-032 Site: position = -58 score = 4.15086 sequence = AAGATTCTAACAATT Gene: BPUM_0954: N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)	* Bacillus licheniformis DSM 13 Site: position = -50 score = 4.88894 sequence = AATTGTCATAAAATT Gene: BLi01088: N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)	Anoxybacillus flavithermus WK1 Gene: Aflv_2283: N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	* Oceanobacillus iheyensis HTE831 Site: position = -58 score = 4.33339 sequence = AATTATATGAATAAT Gene: OB1157: N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)	Paenibacillus sp. JDR-2	N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)

CRON 3.
metI	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -214 score = 4.25119 sequence = AACAATCAGAAAATT Site: position = -297 score = 4.55521 sequence = AATTATTAGAAATTT Gene: BSU11870: Cystathionine gamma-synthase (EC 2.5.1.48)	* Bacillus amyloliquefaciens FZB42 Site: position = -314 score = 4.55521 sequence = AATTATTAGAAATTT Gene: RBAM_011930: Cystathionine gamma-synthase (EC 2.5.1.48)	* Bacillus pumilus SAFR-032 Site: position = -297 score = 4.3945 sequence = AAAATACAGAAAATT Site: position = -287 score = 4.07923 sequence = AAATTTCAATTAATT Gene: BPUM_1119: Cystathionine gamma-synthase (EC 2.5.1.48)	* Bacillus licheniformis DSM 13 Site: position = -164 score = 4.04606 sequence = AACAATCAGAATATT Gene: BLi01289: Cystathionine gamma-synthase (EC 2.5.1.48)	* Anoxybacillus flavithermus WK1 Site: position = -200 score = 4.56824 sequence = AAAAATCAGAAAATT Site: position = -228 score = 4.36955 sequence = ATTTTTCGGAAAATA Gene: Aflv_2067: Cystathionine gamma-synthase (EC 2.5.1.48)	* Geobacillus kaustophilus HTA426 Site: position = -341 score = 4.51226 sequence = AAATTTAAAAAAATT Gene: GK0866: Cystathionine gamma-synthase (EC 2.5.1.48)	* Bacillus cereus ATCC 14579 Site: position = -344 score = 4.44737 sequence = AATTTTTTAATAAAT Gene: BC4253: Cystathionine gamma-synthase (EC 2.5.1.48)	Bacillus halodurans C-125 Gene: BH1627: Cystathionine gamma-synthase (EC 2.5.1.48)	Bacillus clausii KSM-K16 Gene: ABC1867: Cystathionine gamma-synthase (EC 2.5.1.48)	Oceanobacillus iheyensis HTE831	* Paenibacillus sp. JDR-2 Site: position = -6 score = 4.41339 sequence = AACTTTATGAAAATT Gene: Pjdr2_4798: Cystathionine gamma-synthase (EC 2.5.1.48)	Cystathionine gamma-synthase (EC 2.5.1.48)
metC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU11880: Cystathionine beta-lyase (EC 4.4.1.8)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_011940: Cystathionine beta-lyase (EC 4.4.1.8)	Bacillus pumilus SAFR-032 Gene: BPUM_1120: Cystathionine beta-lyase (EC 4.4.1.8)	Bacillus licheniformis DSM 13 Gene: BLi01290: Cystathionine beta-lyase (EC 4.4.1.8)	Anoxybacillus flavithermus WK1 Gene: Aflv_2066: Cystathionine beta-lyase (EC 4.4.1.8)	Geobacillus kaustophilus HTA426 Gene: GK0867: Cystathionine beta-lyase (EC 4.4.1.8)	Bacillus cereus ATCC 14579 Gene: BC4254: Cystathionine beta-lyase (EC 4.4.1.8)	Bacillus halodurans C-125 Gene: BH1628: Cystathionine beta-lyase (EC 4.4.1.8)	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_4797: Cystathionine beta-lyase (EC 4.4.1.8)	Cystathionine beta-lyase (EC 4.4.1.8)

CRON 4.
citA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -55 score = 4.60772 sequence = TATTTTTTAAATATT Gene: BSU09440: Citrate synthase (si) (EC 2.3.3.1)	* Bacillus amyloliquefaciens FZB42 Site: position = -51 score = 4.60772 sequence = TATTTTTTAAATATT Gene: RBAM_009700: Citrate synthase (si) (EC 2.3.3.1)	Bacillus pumilus SAFR-032	* Bacillus licheniformis DSM 13 Site: position = -60 score = 4.60772 sequence = TATTTTTTAAATATT Gene: BLi01010: Citrate synthase (si) (EC 2.3.3.1)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC4043: Citrate synthase (si) (EC 2.3.3.1)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Citrate synthase (si) (EC 2.3.3.1)

CRON 5.
citZ	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -224 score = 4.28067 sequence = AAATGTCTGATTATT Gene: BSU29140: Citrate synthase (si) (EC 2.3.3.1)	* Bacillus amyloliquefaciens FZB42 Site: position = -224 score = 4.17119 sequence = ATTAATCAGATTATT Gene: RBAM_026180: Citrate synthase (si) (EC 2.3.3.1)	* Bacillus pumilus SAFR-032 Site: position = -210 score = 4.28067 sequence = AAATGTCTGATTATT Gene: BPUM_2556: Citrate synthase (si) (EC 2.3.3.1)	* Bacillus licheniformis DSM 13 Site: position = -225 score = 4.4858 sequence = AAATGTCTGATAATT Gene: BLi03062: Citrate synthase (si) (EC 2.3.3.1)	* Anoxybacillus flavithermus WK1 Site: position = -209 score = 4.28067 sequence = AAAAGTCTGATAATT Gene: Aflv_0504: Citrate synthase (si) (EC 2.3.3.1)	* Geobacillus kaustophilus HTA426 Site: position = -201 score = 4.28067 sequence = AAAAGTCTGATAATT Gene: GK2736: Citrate synthase (si) (EC 2.3.3.1)	Bacillus cereus ATCC 14579 Gene: BC4594: Citrate synthase (si) (EC 2.3.3.1)	Bacillus halodurans C-125 Gene: BH3160: Citrate synthase (si) (EC 2.3.3.1)	Bacillus clausii KSM-K16 Gene: ABC2715: Citrate synthase (si) (EC 2.3.3.1)	* Oceanobacillus iheyensis HTE831 Site: position = -222 score = 4.33704 sequence = AAATATTAAAAAATT Gene: OB2168: Citrate synthase (si) (EC 2.3.3.1)	Paenibacillus sp. JDR-2 Gene: Pjdr2_4473: Citrate synthase (si) (EC 2.3.3.1)	Citrate synthase (si) (EC 2.3.3.1)
icd	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU29130: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_026170: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Bacillus pumilus SAFR-032 Gene: BPUM_2555: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Bacillus licheniformis DSM 13 Gene: BLi03061: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Anoxybacillus flavithermus WK1 Gene: Aflv_0505: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Geobacillus kaustophilus HTA426 Gene: GK2735: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Bacillus cereus ATCC 14579 Gene: BC4593: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Bacillus halodurans C-125 Gene: BH3159: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Bacillus clausii KSM-K16 Gene: ABC2714: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Oceanobacillus iheyensis HTE831 Gene: OB2167: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Paenibacillus sp. JDR-2 Gene: Pjdr2_4472: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
mdh	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU29120: Malate dehydrogenase (EC 1.1.1.37)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_026160: Malate dehydrogenase (EC 1.1.1.37)	Bacillus pumilus SAFR-032 Gene: BPUM_2554: Malate dehydrogenase (EC 1.1.1.37)	Bacillus licheniformis DSM 13 Gene: BLi03060: Malate dehydrogenase (EC 1.1.1.37)	Anoxybacillus flavithermus WK1 Gene: Aflv_0506: Malate dehydrogenase (EC 1.1.1.37)	Geobacillus kaustophilus HTA426 Gene: GK2734: Malate dehydrogenase (EC 1.1.1.37)	Bacillus cereus ATCC 14579 Gene: BC4592: Malate dehydrogenase (EC 1.1.1.37)	Bacillus halodurans C-125 Gene: BH3158: Malate dehydrogenase (EC 1.1.1.37)	Bacillus clausii KSM-K16 Gene: ABC2713: Malate dehydrogenase (EC 1.1.1.37)	Oceanobacillus iheyensis HTE831 Gene: OB2166: Malate dehydrogenase (EC 1.1.1.37)	Paenibacillus sp. JDR-2 Gene: Pjdr2_4471: Malate dehydrogenase (EC 1.1.1.37)	Malate dehydrogenase (EC 1.1.1.37)

CRON 6.
phoB	2 Bacillus subtilis subsp. subtilis str. 168* Gene: BSU05740: Alkaline phosphatase (EC 3.1.3.1) Site: position = -156 score = 4.8502 sequence = ATTTTTCTGAAAAAT Gene: BSU09410: Alkaline phosphatase (EC 3.1.3.1)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_009670: Alkaline phosphatase (EC 3.1.3.1)	2 Bacillus pumilus SAFR-032 Gene: BPUM_0641: Alkaline phosphatase (EC 3.1.3.1) Gene: BPUM_0896: Alkaline phosphatase (EC 3.1.3.1)	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	* Bacillus cereus ATCC 14579 Site: position = -238 score = 4.56826 sequence = TATTTTCATAAAAAT Gene: BC4343: Alkaline phosphatase (EC 3.1.3.1)	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Alkaline phosphatase (EC 3.1.3.1)

CRON 7.
spoVS	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -186 score = 4.41334 sequence = TATTTTATAAAAATA Gene: BSU16980: Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)	* Bacillus amyloliquefaciens FZB42 Site: position = -186 score = 4.41334 sequence = TATTTTATAAAAATA Gene: RBAM_016820: Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)	Bacillus pumilus SAFR-032 Gene: BPUM_1601: Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)	Bacillus licheniformis DSM 13 Gene: BLi01921: Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)	* Anoxybacillus flavithermus WK1 Site: position = -116 score = 4.5777 sequence = ATTTTTCTGAAAAAA Gene: Aflv_1527: Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)	Geobacillus kaustophilus HTA426 Gene: GK1299: Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)	* Bacillus cereus ATCC 14579 Site: position = -113 score = 4.63203 sequence = ATTTTTTAGAAAAAT Gene: BC3776: Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)	Bacillus halodurans C-125 Gene: BH2375: Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)	Bacillus clausii KSM-K16 Gene: ABC2192: Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)	Oceanobacillus iheyensis HTE831 Gene: OB1627: Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)	Paenibacillus sp. JDR-2 Gene: Pjdr2_3375: Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)	Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)

CRON 8.
citB	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -72 score = 4.6961 sequence = AATTGTGAGAAAATT Gene: BSU18000: Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)	* Bacillus amyloliquefaciens FZB42 Site: position = -77 score = 4.6961 sequence = AATTGTGAGAAAATT Gene: RBAM_017800: Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)	* Bacillus pumilus SAFR-032 Site: position = -52 score = 4.57214 sequence = ATTTTTCTGAGAATT Site: position = -83 score = 4.6961 sequence = AATTGTGAGAAAATT Gene: BPUM_1699: Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)	* Bacillus licheniformis DSM 13 Site: position = -78 score = 4.6961 sequence = AATTGTGAGAAAATT Gene: BLi02047: Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)	Anoxybacillus flavithermus WK1 Gene: Aflv_1492: Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)	Geobacillus kaustophilus HTA426 Gene: GK1347: Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)	Bacillus cereus ATCC 14579 Gene: BC3616: Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)	Bacillus halodurans C-125 Gene: BH2299: Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)	Bacillus clausii KSM-K16 Gene: ABC2157: Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)	Oceanobacillus iheyensis HTE831 Gene: OB1681: Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)	2 Paenibacillus sp. JDR-2 Gene: Pjdr2_2034: Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) Gene: Pjdr2_0811: Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)	Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)

CRON 9.
ackA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -182 score = 3.96591 sequence = atgTgTCtGAaAata Gene: BSU29470: Acetate kinase (EC 2.7.2.1)	* Bacillus amyloliquefaciens FZB42 Site: position = -172 score = 4.6112 sequence = ATTTATCAGAAAATA Gene: RBAM_026400: Acetate kinase (EC 2.7.2.1)	* Bacillus pumilus SAFR-032 Site: position = -206 score = 4.70831 sequence = ATTATTCAGAAAATA Gene: BPUM_2579: Acetate kinase (EC 2.7.2.1)	* Bacillus licheniformis DSM 13 Site: position = -194 score = 4.77156 sequence = TATATTCAGAAAATA Gene: BLi03086: Acetate kinase (EC 2.7.2.1)	Anoxybacillus flavithermus WK1 Gene: Aflv_0480: Acetate kinase (EC 2.7.2.1)	Geobacillus kaustophilus HTA426 Gene: GK2785: Acetate kinase (EC 2.7.2.1)	Bacillus cereus ATCC 14579 Gene: BC4637: Acetate kinase (EC 2.7.2.1)	Bacillus halodurans C-125 Gene: BH3192: Acetate kinase (EC 2.7.2.1)	Bacillus clausii KSM-K16 Gene: ABC2740: Acetate kinase (EC 2.7.2.1)	Oceanobacillus iheyensis HTE831 Gene: OB2191: Acetate kinase (EC 2.7.2.1)	Paenibacillus sp. JDR-2	Acetate kinase (EC 2.7.2.1)

CRON 10.
argG	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU29450: Argininosuccinate synthase (EC 6.3.4.5)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_026380: Argininosuccinate synthase (EC 6.3.4.5)	Bacillus pumilus SAFR-032 Gene: BPUM_2577: Argininosuccinate synthase (EC 6.3.4.5)	Bacillus licheniformis DSM 13 Gene: BLi03084: Argininosuccinate synthase (EC 6.3.4.5)	Anoxybacillus flavithermus WK1 Gene: Aflv_0482: Argininosuccinate synthase (EC 6.3.4.5)	Geobacillus kaustophilus HTA426 Gene: GK2757: Argininosuccinate synthase (EC 6.3.4.5)	* Bacillus cereus ATCC 14579 Site: position = -108 score = 4.4077 sequence = AATTGTTTGAAAAAA Gene: BC4630: Argininosuccinate synthase (EC 6.3.4.5)	Bacillus halodurans C-125 Gene: BH3187: Argininosuccinate synthase (EC 6.3.4.5)	Bacillus clausii KSM-K16 Gene: ABC2737: Argininosuccinate synthase (EC 6.3.4.5)	* Oceanobacillus iheyensis HTE831 Site: position = -101 score = 4.40607 sequence = AATAATCAGAAAAAA Gene: OB3129: Argininosuccinate synthase (EC 6.3.4.5)	Paenibacillus sp. JDR-2 Gene: Pjdr2_5738: Argininosuccinate synthase (EC 6.3.4.5)	Argininosuccinate synthase (EC 6.3.4.5)
argH	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU29440: Argininosuccinate lyase (EC 4.3.2.1)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_026370: Argininosuccinate lyase (EC 4.3.2.1)	Bacillus pumilus SAFR-032 Gene: BPUM_2576: Argininosuccinate lyase (EC 4.3.2.1)	Bacillus licheniformis DSM 13 Gene: BLi03083: Argininosuccinate lyase (EC 4.3.2.1)	Anoxybacillus flavithermus WK1 Gene: Aflv_0483: Argininosuccinate lyase (EC 4.3.2.1)	Geobacillus kaustophilus HTA426 Gene: GK2756: Argininosuccinate lyase (EC 4.3.2.1)	Bacillus cereus ATCC 14579 Gene: BC4629: Argininosuccinate lyase (EC 4.3.2.1)	Bacillus halodurans C-125 Gene: BH3186: Argininosuccinate lyase (EC 4.3.2.1)	Bacillus clausii KSM-K16 Gene: ABC2736: Argininosuccinate lyase (EC 4.3.2.1)	Oceanobacillus iheyensis HTE831 Gene: OB3128: Argininosuccinate lyase (EC 4.3.2.1)	Paenibacillus sp. JDR-2 Gene: Pjdr2_5737: Argininosuccinate lyase (EC 4.3.2.1)	Argininosuccinate lyase (EC 4.3.2.1)

CRON 11.
yoyD	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -80 score = 4.39304 sequence = TTTTTTCTAATAATT Gene: BSU19579: Hypothetical protein	Bacillus amyloliquefaciens FZB42	* Bacillus pumilus SAFR-032 Site: position = -27 score = 4.38147 sequence = AAATTACAAAAAATT Gene: BPUM_1877: Hypothetical protein	* Bacillus licheniformis DSM 13 Site: position = -81 score = 4.39304 sequence = TTTTTTCTAATAATT Gene: BLi02277: Hypothetical protein	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Hypothetical protein
yodF	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU19580: SSS family solute:sodium (Na+) symporter	* Bacillus amyloliquefaciens FZB42 Site: position = -280 score = 4.5777 sequence = TTTTTTCTGAAAAAT Gene: RBAM_019340: SSS family solute:sodium (Na+) symporter	Bacillus pumilus SAFR-032 Gene: BPUM_1878: SSS family solute:sodium (Na+) symporter	Bacillus licheniformis DSM 13 Gene: BLi02278: SSS family solute:sodium (Na+) symporter	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	SSS family solute:sodium (Na+) symporter

CRON 12.
glnH	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	* Anoxybacillus flavithermus WK1 Site: position = -122 score = 4.68584 sequence = TATTTTTATAAAATT Gene: Aflv_2792: Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)	* Geobacillus kaustophilus HTA426 Site: position = -264 score = 4.84058 sequence = AATATTCTGTAAATT Gene: GK3453: Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC0026: Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)	* Oceanobacillus iheyensis HTE831 Site: position = -108 score = 4.40412 sequence = ATTTTTCTGAAATAT Gene: OB1004: Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)	Paenibacillus sp. JDR-2	Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)
glnP	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1 Gene: Aflv_2791: Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)	Geobacillus kaustophilus HTA426 Gene: GK3454: Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC0027: Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)	Oceanobacillus iheyensis HTE831 Gene: OB1005: Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)	Paenibacillus sp. JDR-2	Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)
glnQ	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032 Gene: BPUM_3490: Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1 Gene: Aflv_2790: Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)	Geobacillus kaustophilus HTA426 Gene: GK3455: Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC0028: Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)	Oceanobacillus iheyensis HTE831 Gene: OB1006: Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)	Paenibacillus sp. JDR-2	Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)

CRON 13.
yocS	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -92 score = 4.98081 sequence = ATTATTCAGAAAATT Gene: BSU19350: Sodium-dependent transporter	* Bacillus amyloliquefaciens FZB42 Site: position = -169 score = 4.4113 sequence = AATTGTAAGAATATA Gene: RBAM_019100: Sodium-dependent transporter	* Bacillus pumilus SAFR-032 Site: position = -62 score = 4.91345 sequence = TTTTTTCAGAAAATT Gene: BPUM_1860: Sodium-dependent transporter	* Bacillus licheniformis DSM 13 Site: position = -66 score = 4.77568 sequence = ATTATTCAGAATATT Gene: BLi02258: Sodium-dependent transporter	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	* Bacillus halodurans C-125 Site: position = 26 score = 4.43747 sequence = ATTTTTCAGTAAATA Gene: BH0858: Sodium-dependent transporter	Bacillus clausii KSM-K16 Gene: ABC1222: Sodium-dependent transporter	* Oceanobacillus iheyensis HTE831 Site: position = -56 score = 4.43958 sequence = TATTATCAGATTATT Gene: OB0994: Sodium-dependent transporter	Paenibacillus sp. JDR-2	Sodium-dependent transporter

CRON 14.
bacA	2 Bacillus subtilis subsp. subtilis str. 168* Site: position = -36 score = 4.70054 sequence = AATTTACTTAAAATT Gene: BSU37740: Prephenate dehydratase (EC 4.2.1.51) Gene: BSU27900: Prephenate dehydratase (EC 4.2.1.51)	2 Bacillus amyloliquefaciens FZB42* Gene: RBAM_024950: Prephenate dehydratase (EC 4.2.1.51) Site: position = -26 score = 4.42803 sequence = TATTTACTTAAAATT Site: position = -67 score = 4.45628 sequence = TATTTTCAAATAATA Gene: RBAM_034930: Prephenate dehydratase (EC 4.2.1.51)	2 Bacillus pumilus SAFR-032 Gene: BPUM_2430: Prephenate dehydratase (EC 4.2.1.51) Gene: BPUM_3420: Prephenate dehydratase (EC 4.2.1.51)	2 Bacillus licheniformis DSM 13 Gene: BLi04239: Prephenate dehydratase (EC 4.2.1.51) Gene: BLi02917: Prephenate dehydratase (EC 4.2.1.51)	Anoxybacillus flavithermus WK1 Gene: Aflv_0700: Prephenate dehydratase (EC 4.2.1.51)	Geobacillus kaustophilus HTA426 Gene: GK2604: Prephenate dehydratase (EC 4.2.1.51)	Bacillus cereus ATCC 14579 Gene: BC4427: Prephenate dehydratase (EC 4.2.1.51)	Bacillus halodurans C-125 Gene: BH1215: Prephenate dehydratase (EC 4.2.1.51)	Bacillus clausii KSM-K16 Gene: ABC1544: Prephenate dehydratase (EC 4.2.1.51)	Oceanobacillus iheyensis HTE831 Gene: OB2041: Prephenate dehydratase (EC 4.2.1.51)	2 Paenibacillus sp. JDR-2 Gene: Pjdr2_0581: Prephenate dehydratase (EC 4.2.1.51) Gene: Pjdr2_4405: Prephenate dehydratase (EC 4.2.1.51)	Prephenate dehydratase (EC 4.2.1.51)
bacB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU37730: Bacilysin biosynthesis protein BacB	Bacillus amyloliquefaciens FZB42 Gene: RBAM_034920: Bacilysin biosynthesis protein BacB	Bacillus pumilus SAFR-032 Gene: BPUM_3421: Bacilysin biosynthesis protein BacB	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Bacilysin biosynthesis protein BacB
bacC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU37720: Bacilysin biosynthesis oxidoreductase BacC	Bacillus amyloliquefaciens FZB42 Gene: RBAM_034910: Bacilysin biosynthesis oxidoreductase BacC	Bacillus pumilus SAFR-032 Gene: BPUM_3422: Bacilysin biosynthesis oxidoreductase BacC	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC3707: Bacilysin biosynthesis oxidoreductase BacC	Oceanobacillus iheyensis HTE831 Gene: OB3309: Bacilysin biosynthesis oxidoreductase BacC	Paenibacillus sp. JDR-2	Bacilysin biosynthesis oxidoreductase BacC
bacD	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU37710: Alanine-anticapsin ligase BacD	Bacillus amyloliquefaciens FZB42 Gene: RBAM_034900: Alanine-anticapsin ligase BacD	Bacillus pumilus SAFR-032 Gene: BPUM_3423: Alanine-anticapsin ligase BacD	Bacillus licheniformis DSM 13	* Anoxybacillus flavithermus WK1 Site: position = -238 score = 4.66914 sequence = AATTTTCATATTATT Gene: Aflv_0217: Alanine-anticapsin ligase BacD	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Alanine-anticapsin ligase BacD
bacE	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU37700: Bacilysin exporter protein BacE	Bacillus amyloliquefaciens FZB42 Gene: RBAM_034890: Bacilysin exporter protein BacE	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Bacilysin exporter protein BacE
mtnE	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU37690: Aspartate aminotransferase (EC 2.6.1.1)	2 Bacillus amyloliquefaciens FZB42 Gene: RBAM_013360: Aspartate aminotransferase (EC 2.6.1.1) Gene: RBAM_034880: Aspartate aminotransferase (EC 2.6.1.1)	2 Bacillus pumilus SAFR-032 Gene: BPUM_1251: Aspartate aminotransferase (EC 2.6.1.1) Gene: BPUM_3424: Aspartate aminotransferase (EC 2.6.1.1)	Bacillus licheniformis DSM 13 Gene: BLi01514: Aspartate aminotransferase (EC 2.6.1.1)	Anoxybacillus flavithermus WK1 Gene: Aflv_1998: Aspartate aminotransferase (EC 2.6.1.1)	Geobacillus kaustophilus HTA426 Gene: GK0952: Aspartate aminotransferase (EC 2.6.1.1)	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC1492: Aspartate aminotransferase (EC 2.6.1.1)	Oceanobacillus iheyensis HTE831 Gene: OB0420: Aspartate aminotransferase (EC 2.6.1.1)	Paenibacillus sp. JDR-2 Gene: Pjdr2_2469: Aspartate aminotransferase (EC 2.6.1.1)	Aspartate aminotransferase (EC 2.6.1.1)

CRON 15.
iscS	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -165 score = 4.55301 sequence = AATATTCTGTCAATT Site: position = -150 score = 4.65938 sequence = AATTGTCAGATAATA Gene: BSU29590: Cysteine desulfurase (EC 2.8.1.7)	* Bacillus amyloliquefaciens FZB42 Site: position = -152 score = 4.65938 sequence = AATTGTCAGATAATA Site: position = -167 score = 4.55301 sequence = AATATTCTGTCAATT Gene: RBAM_026520: Cysteine desulfurase (EC 2.8.1.7)	Bacillus pumilus SAFR-032	* Bacillus licheniformis DSM 13 Site: position = -165 score = 4.75815 sequence = AATTTTCTGTCAATT Gene: BLi03101: Cysteine desulfurase (EC 2.8.1.7)	Anoxybacillus flavithermus WK1 Gene: Aflv_0471: Cysteine desulfurase (EC 2.8.1.7)	Geobacillus kaustophilus HTA426 Gene: GK2796: Cysteine desulfurase (EC 2.8.1.7)	Bacillus cereus ATCC 14579 Gene: BC4648: Cysteine desulfurase (EC 2.8.1.7)	Bacillus halodurans C-125 Gene: BH3204: Cysteine desulfurase (EC 2.8.1.7)	Bacillus clausii KSM-K16 Gene: ABC2750: Cysteine desulfurase (EC 2.8.1.7)	Oceanobacillus iheyensis HTE831 Gene: OB2199: Cysteine desulfurase (EC 2.8.1.7)	Paenibacillus sp. JDR-2 Gene: Pjdr2_3923: Cysteine desulfurase (EC 2.8.1.7)	Cysteine desulfurase (EC 2.8.1.7)
thiI	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU29580: Thiamine biosynthesis protein ThiI	Bacillus amyloliquefaciens FZB42 Gene: RBAM_026510: Thiamine biosynthesis protein ThiI	Bacillus pumilus SAFR-032 Gene: BPUM_2602: Thiamine biosynthesis protein ThiI	Bacillus licheniformis DSM 13 Gene: BLi03100: Thiamine biosynthesis protein ThiI	Anoxybacillus flavithermus WK1 Gene: Aflv_0472: Thiamine biosynthesis protein ThiI	Geobacillus kaustophilus HTA426 Gene: GK2795: Thiamine biosynthesis protein ThiI	Bacillus cereus ATCC 14579 Gene: BC4647: Thiamine biosynthesis protein ThiI	Bacillus halodurans C-125 Gene: BH3203: Thiamine biosynthesis protein ThiI	Bacillus clausii KSM-K16 Gene: ABC2749: Thiamine biosynthesis protein ThiI	Oceanobacillus iheyensis HTE831 Gene: OB2198: Thiamine biosynthesis protein ThiI	Paenibacillus sp. JDR-2 Gene: Pjdr2_3922: Thiamine biosynthesis protein ThiI	Thiamine biosynthesis protein ThiI

CRON 16.
acuA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -97 score = 4.60772 sequence = AATTTTTAAAATATA Gene: BSU29690: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor	* Bacillus amyloliquefaciens FZB42 Site: position = -100 score = 4.60772 sequence = AATTTTTAAAATATA Gene: RBAM_026810: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor	* Bacillus pumilus SAFR-032 Site: position = -93 score = 4.60811 sequence = AATTTTTAAAAAACT Gene: BPUM_2617: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor	* Bacillus licheniformis DSM 13 Site: position = -96 score = 4.81286 sequence = AATTTTTAAAAAATA Gene: BLi03120: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor	* Anoxybacillus flavithermus WK1 Site: position = -101 score = 5.08536 sequence = AATTTTTAAAAAATT Gene: Aflv_0461: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor	* Geobacillus kaustophilus HTA426 Site: position = -87 score = 4.3802 sequence = ACTTTTTTGAAATTT Site: position = -112 score = 4.88023 sequence = AATTTTTAAAATATT Gene: GK2807: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor	* Bacillus cereus ATCC 14579 Site: position = -110 score = 4.84058 sequence = AATTTTCAGTATATT Gene: BC4660: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor	Bacillus halodurans C-125 Gene: BH3235: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor	Bacillus clausii KSM-K16 Gene: ABC2761: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor	* Oceanobacillus iheyensis HTE831 Site: position = -85 score = 4.58494 sequence = AAATTTCAAAAAATA Gene: OB2221: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor	Paenibacillus sp. JDR-2 Gene: Pjdr2_3797: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor	Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor
acuB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU29700: Component of the acetoin degradation regulation pathway	Bacillus amyloliquefaciens FZB42 Gene: RBAM_026820: Component of the acetoin degradation regulation pathway	Bacillus pumilus SAFR-032 Gene: BPUM_2618: Component of the acetoin degradation regulation pathway	Bacillus licheniformis DSM 13 Gene: BLi03121: Component of the acetoin degradation regulation pathway	Anoxybacillus flavithermus WK1 Gene: Aflv_0460: Component of the acetoin degradation regulation pathway	Geobacillus kaustophilus HTA426 Gene: GK2808: Component of the acetoin degradation regulation pathway	Bacillus cereus ATCC 14579 Gene: BC4661: Component of the acetoin degradation regulation pathway	Bacillus halodurans C-125 Gene: BH3236: Component of the acetoin degradation regulation pathway	Bacillus clausii KSM-K16 Gene: ABC2762: Component of the acetoin degradation regulation pathway	Oceanobacillus iheyensis HTE831 Gene: OB2222: Component of the acetoin degradation regulation pathway	Paenibacillus sp. JDR-2	Component of the acetoin degradation regulation pathway
acuC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU29710: NAD-independent protein deacetylase AcuC	Bacillus amyloliquefaciens FZB42 Gene: RBAM_026830: NAD-independent protein deacetylase AcuC	Bacillus pumilus SAFR-032 Gene: BPUM_2619: NAD-independent protein deacetylase AcuC	Bacillus licheniformis DSM 13 Gene: BLi03122: NAD-independent protein deacetylase AcuC	Anoxybacillus flavithermus WK1 Gene: Aflv_0459: NAD-independent protein deacetylase AcuC	Geobacillus kaustophilus HTA426 Gene: GK2809: NAD-independent protein deacetylase AcuC	Bacillus cereus ATCC 14579 Gene: BC4662: NAD-independent protein deacetylase AcuC	Bacillus halodurans C-125 Gene: BH3237: NAD-independent protein deacetylase AcuC	Bacillus clausii KSM-K16 Gene: ABC2763: NAD-independent protein deacetylase AcuC	Oceanobacillus iheyensis HTE831 Gene: OB2223: NAD-independent protein deacetylase AcuC	Paenibacillus sp. JDR-2 Gene: Pjdr2_3798: NAD-independent protein deacetylase AcuC	NAD-independent protein deacetylase AcuC

CRON 17.
serA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -44 score = 4.47113 sequence = AATTATCAGATATTT Gene: BSU23070: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	* Bacillus amyloliquefaciens FZB42 Site: position = -44 score = 4.47113 sequence = AATTATCAGATATTT Gene: RBAM_021220: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	* Bacillus pumilus SAFR-032 Site: position = -45 score = 4.47113 sequence = AATTATCAGATATTT Gene: BPUM_2039: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	* Bacillus licheniformis DSM 13 Site: position = -43 score = 4.47113 sequence = AATTATCAGATATTT Gene: BLi02446: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	* Anoxybacillus flavithermus WK1 Site: position = -47 score = 4.77338 sequence = AATTATCAGAAATTT Gene: Aflv_1055: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	* Geobacillus kaustophilus HTA426 Site: position = -86 score = 4.77338 sequence = AATTATCAGAAATTT Gene: GK2247: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH1602: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	Bacillus clausii KSM-K16 Gene: ABC1843: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	Oceanobacillus iheyensis HTE831 Gene: OB2626: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	Paenibacillus sp. JDR-2 Gene: Pjdr2_2370: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)

CRON 18.
spoIIQ	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -44 score = 4.77195 sequence = TATTTTCAGAAAAGT Gene: BSU36550: Stage II sporulation protein related to metaloproteases (SpoIIQ)	* Bacillus amyloliquefaciens FZB42 Site: position = -44 score = 4.77195 sequence = TATTTTCAGAAAAGT Gene: RBAM_033730: Stage II sporulation protein related to metaloproteases (SpoIIQ)	* Bacillus pumilus SAFR-032 Site: position = -43 score = 4.55378 sequence = TATTTTTTGAAAAGT Gene: BPUM_3302: Stage II sporulation protein related to metaloproteases (SpoIIQ)	* Bacillus licheniformis DSM 13 Site: position = -43 score = 4.77195 sequence = TATTTTCTGAAAAGT Gene: BLi03892: Stage II sporulation protein related to metaloproteases (SpoIIQ)	Anoxybacillus flavithermus WK1 Gene: Aflv_2685: Stage II sporulation protein related to metaloproteases (SpoIIQ)	Geobacillus kaustophilus HTA426 Gene: GK3339: Stage II sporulation protein related to metaloproteases (SpoIIQ)	Bacillus cereus ATCC 14579 Gene: BC5283: Stage II sporulation protein related to metaloproteases (SpoIIQ)	Bacillus halodurans C-125 Gene: BH3746: Stage II sporulation protein related to metaloproteases (SpoIIQ)	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831 Gene: OB2961: Stage II sporulation protein related to metaloproteases (SpoIIQ)	Paenibacillus sp. JDR-2 Gene: Pjdr2_5795: Stage II sporulation protein related to metaloproteases (SpoIIQ)	Stage II sporulation protein related to metaloproteases (SpoIIQ)

CRON 19.
ilvA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -68 score = 4.82589 sequence = TATTTTTTGAATATT Gene: BSU21770: Threonine dehydratase biosynthetic (EC 4.3.1.19)	* Bacillus amyloliquefaciens FZB42 Site: position = -67 score = 4.52365 sequence = TATTATTTGAATATT Site: position = -75 score = 4.38156 sequence = AATTGTCTTATTATT Gene: RBAM_019920: Threonine dehydratase biosynthetic (EC 4.3.1.19)	* Bacillus pumilus SAFR-032 Site: position = -64 score = 4.82589 sequence = TATTTTTTGAATATT Gene: BPUM_1911: Threonine dehydratase biosynthetic (EC 4.3.1.19)	* Bacillus licheniformis DSM 13 Site: position = -97 score = 4.56808 sequence = AATATTCTGTAAATA Gene: BLi02315: Threonine dehydratase biosynthetic (EC 4.3.1.19)	* Anoxybacillus flavithermus WK1 Site: position = -99 score = 4.96778 sequence = ATTTTTTAGAAAATT Gene: Aflv_1453: Threonine dehydratase biosynthetic (EC 4.3.1.19)	Geobacillus kaustophilus HTA426 Gene: GK1773: Threonine dehydratase biosynthetic (EC 4.3.1.19)	Bacillus cereus ATCC 14579 Gene: BC1781: Threonine dehydratase biosynthetic (EC 4.3.1.19)	Bacillus halodurans C-125 Gene: BH1711: Threonine dehydratase biosynthetic (EC 4.3.1.19)	Bacillus clausii KSM-K16 Gene: ABC2049: Threonine dehydratase biosynthetic (EC 4.3.1.19)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_0468: Threonine dehydratase biosynthetic (EC 4.3.1.19)	Threonine dehydratase biosynthetic (EC 4.3.1.19)

CRON 20.
ycjH	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -73 score = 4.55521 sequence = AAATTTCTAATAATT Gene: BSU11860: Putative acetyl esterase YjcH (EC 3.1.1.-)	* Bacillus amyloliquefaciens FZB42 Site: position = -70 score = 4.55521 sequence = AAATTTCTAATAATT Gene: RBAM_011920: Putative acetyl esterase YjcH (EC 3.1.1.-)	* Bacillus pumilus SAFR-032 Site: position = -140 score = 4.3945 sequence = AATTTTCTGTATTTT Gene: BPUM_1118: Putative acetyl esterase YjcH (EC 3.1.1.-)	Bacillus licheniformis DSM 13 Gene: BLi01285: Putative acetyl esterase YjcH (EC 3.1.1.-)	Anoxybacillus flavithermus WK1 Gene: Aflv_2072: Putative acetyl esterase YjcH (EC 3.1.1.-)	* Geobacillus kaustophilus HTA426 Site: position = -172 score = 4.51226 sequence = AATTTTTTTAAATTT Gene: GK0865: Putative acetyl esterase YjcH (EC 3.1.1.-)	Bacillus cereus ATCC 14579 Gene: BC1226: Putative acetyl esterase YjcH (EC 3.1.1.-)	Bacillus halodurans C-125 Gene: BH1440: Putative acetyl esterase YjcH (EC 3.1.1.-)	Bacillus clausii KSM-K16 Gene: ABC1742: Putative acetyl esterase YjcH (EC 3.1.1.-)	Oceanobacillus iheyensis HTE831 Gene: OB1231: Putative acetyl esterase YjcH (EC 3.1.1.-)	Paenibacillus sp. JDR-2	Putative acetyl esterase YjcH (EC 3.1.1.-)
yjcG	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU11850: RNA ligase/cyclic nucleotide phosphodiesterase	Bacillus amyloliquefaciens FZB42 Gene: RBAM_011910: RNA ligase/cyclic nucleotide phosphodiesterase	Bacillus pumilus SAFR-032 Gene: BPUM_1117: RNA ligase/cyclic nucleotide phosphodiesterase	Bacillus licheniformis DSM 13 Gene: BLi01284: RNA ligase/cyclic nucleotide phosphodiesterase	* Anoxybacillus flavithermus WK1 Site: position = -35 score = 4.7053 sequence = TATTTTCCGAAAATT Gene: Aflv_2073: RNA ligase/cyclic nucleotide phosphodiesterase	Geobacillus kaustophilus HTA426 Gene: GK0864: RNA ligase/cyclic nucleotide phosphodiesterase	Bacillus cereus ATCC 14579 Gene: BC1225: RNA ligase/cyclic nucleotide phosphodiesterase	Bacillus halodurans C-125 Gene: BH1439: RNA ligase/cyclic nucleotide phosphodiesterase	Bacillus clausii KSM-K16 Gene: ABC1741: RNA ligase/cyclic nucleotide phosphodiesterase	Oceanobacillus iheyensis HTE831 Gene: OB1230: RNA ligase/cyclic nucleotide phosphodiesterase	Paenibacillus sp. JDR-2 Gene: Pjdr2_3852: RNA ligase/cyclic nucleotide phosphodiesterase	RNA ligase/cyclic nucleotide phosphodiesterase
yjcF	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU11840: GNAT family acetyltransferase YjcF	Bacillus amyloliquefaciens FZB42 Gene: RBAM_011900: GNAT family acetyltransferase YjcF	Bacillus pumilus SAFR-032 Gene: BPUM_1116: GNAT family acetyltransferase YjcF	Bacillus licheniformis DSM 13 Gene: BLi01283: GNAT family acetyltransferase YjcF	Anoxybacillus flavithermus WK1 Gene: Aflv_2074: GNAT family acetyltransferase YjcF	Geobacillus kaustophilus HTA426 Gene: GK0863: GNAT family acetyltransferase YjcF	Bacillus cereus ATCC 14579 Gene: BC1224: GNAT family acetyltransferase YjcF	Bacillus halodurans C-125 Gene: BH1438: GNAT family acetyltransferase YjcF	Bacillus clausii KSM-K16 Gene: ABC1740: GNAT family acetyltransferase YjcF	Oceanobacillus iheyensis HTE831 Gene: OB1229: GNAT family acetyltransferase YjcF	Paenibacillus sp. JDR-2	GNAT family acetyltransferase YjcF

CRON 21.
opuE	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -256 score = 4.98081 sequence = ATTTTTCTGAATATT Gene: BSU06660: Sodium/proline symporter	* Bacillus amyloliquefaciens FZB42 Site: position = -273 score = 4.45229 sequence = ATATGTCAGAAAATT Gene: RBAM_007060: Sodium/proline symporter	* Bacillus pumilus SAFR-032 Site: position = -231 score = 4.88371 sequence = ATTTATCAGAAAATT Gene: BPUM_0643: Sodium/proline symporter	* Bacillus licheniformis DSM 13 Site: position = -289 score = 5.11143 sequence = AATATTCAGAATATT Gene: BLi00728: Sodium/proline symporter	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	* Bacillus cereus ATCC 14579 Site: position = -214 score = 5.31656 sequence = AATTTTCTGAATATT Gene: BC3644: Sodium/proline symporter	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Sodium/proline symporter

CRON 22.
yuiA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -36 score = 4.94695 sequence = TATTATCAGAAAATT Gene: BSU32090: Conserved hypothetical protein	* Bacillus amyloliquefaciens FZB42 Site: position = -34 score = 4.94695 sequence = TATTATCAGAAAATT Gene: RBAM_029140: Conserved hypothetical protein	Bacillus pumilus SAFR-032	* Bacillus licheniformis DSM 13 Site: position = -35 score = 4.94695 sequence = TATTATCAGAAAATT Gene: BLi03391: Conserved hypothetical protein	* Anoxybacillus flavithermus WK1 Site: position = -35 score = 5.21946 sequence = AATTATCTGAAAATT Gene: Aflv_2401: Conserved hypothetical protein	* Geobacillus kaustophilus HTA426 Site: position = -54 score = 4.43747 sequence = TTTTTACAGAAAATT Gene: GK2951: Conserved hypothetical protein	Bacillus cereus ATCC 14579	* Bacillus halodurans C-125 Site: position = -47 score = 4.29574 sequence = AAAATTCTGATAATA Gene: BH3406: Conserved hypothetical protein	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Conserved hypothetical protein
yuiB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU32080: Hypothetical membrane protein	Bacillus amyloliquefaciens FZB42 Gene: RBAM_029130: Hypothetical membrane protein	Bacillus pumilus SAFR-032 Gene: BPUM_2870: Hypothetical membrane protein	Bacillus licheniformis DSM 13 Gene: BLi03390: Hypothetical membrane protein	Anoxybacillus flavithermus WK1 Gene: Aflv_2400: Hypothetical membrane protein	Geobacillus kaustophilus HTA426 Gene: GK2950: Hypothetical membrane protein	Bacillus cereus ATCC 14579 Gene: BC4923: Hypothetical membrane protein	Bacillus halodurans C-125 Gene: BH3405: Hypothetical membrane protein	Bacillus clausii KSM-K16 Gene: ABC2923: Hypothetical membrane protein	Oceanobacillus iheyensis HTE831 Gene: OB2349: Hypothetical membrane protein	Paenibacillus sp. JDR-2 Gene: Pjdr2_4831: Hypothetical membrane protein	Hypothetical membrane protein
yuiC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU32070: Cell wall-binding protein	Bacillus amyloliquefaciens FZB42 Gene: RBAM_029120: Cell wall-binding protein	Bacillus pumilus SAFR-032 Gene: BPUM_2869: Cell wall-binding protein	Bacillus licheniformis DSM 13 Gene: BLi03389: Cell wall-binding protein	Anoxybacillus flavithermus WK1 Gene: Aflv_2399: Cell wall-binding protein	Geobacillus kaustophilus HTA426 Gene: GK2949: Cell wall-binding protein	Bacillus cereus ATCC 14579 Gene: BC4922: Cell wall-binding protein	Bacillus halodurans C-125 Gene: BH3404: Cell wall-binding protein	Bacillus clausii KSM-K16 Gene: ABC2922: Cell wall-binding protein	Oceanobacillus iheyensis HTE831 Gene: OB2348: Cell wall-binding protein	Paenibacillus sp. JDR-2 Gene: Pjdr2_4791: Cell wall-binding protein	Cell wall-binding protein

CRON 23.
spoVG	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -98 score = 4.42277 sequence = TTTTTTCAAAAAATA Gene: BSU00490: Stage V sporulation protein G required for spore cortex synthesis	Bacillus amyloliquefaciens FZB42 Gene: RBAM_000580: Stage V sporulation protein G required for spore cortex synthesis	Bacillus pumilus SAFR-032 Gene: BPUM_0033: Stage V sporulation protein G required for spore cortex synthesis	Bacillus licheniformis DSM 13 Gene: BLi00062: Stage V sporulation protein G required for spore cortex synthesis	Anoxybacillus flavithermus WK1 Gene: Aflv_0042: Stage V sporulation protein G required for spore cortex synthesis	* Geobacillus kaustophilus HTA426 Site: position = -96 score = 4.60938 sequence = AATTTATAAAAAATT Gene: GK0042: Stage V sporulation protein G required for spore cortex synthesis	* Bacillus cereus ATCC 14579 Site: position = -87 score = 5.08536 sequence = AATTTTTAAAAAATT Gene: BC0053: Stage V sporulation protein G required for spore cortex synthesis	Bacillus halodurans C-125 Gene: BH0064: Stage V sporulation protein G required for spore cortex synthesis	Bacillus clausii KSM-K16 Gene: ABC0077: Stage V sporulation protein G required for spore cortex synthesis	Oceanobacillus iheyensis HTE831 Gene: OB0057: Stage V sporulation protein G required for spore cortex synthesis	Paenibacillus sp. JDR-2 Gene: Pjdr2_0034: Stage V sporulation protein G required for spore cortex synthesis	Stage V sporulation protein G required for spore cortex synthesis

CRON 24.
BH3439	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	* Bacillus licheniformis DSM 13 Site: position = -56 score = 5.00129 sequence = AATTATTAGAAAATT Gene: BLi03425: Sodium/proline symporter	* Anoxybacillus flavithermus WK1 Site: position = -166 score = 4.54448 sequence = ATTTTTTAAAATATT Gene: Aflv_2428: Sodium/proline symporter	Geobacillus kaustophilus HTA426	* Bacillus cereus ATCC 14579 Site: position = -70 score = 4.52531 sequence = AATTTATTGATAATT Gene: BC4071: Sodium/proline symporter	* Bacillus halodurans C-125 Site: position = -62 score = 5.04406 sequence = AATTTTCTGAATATA Site: position = -240 score = 4.48714 sequence = AATTTTCGAAAAATA Gene: BH3439: Sodium/proline symporter	* Bacillus clausii KSM-K16 Site: position = -101 score = 4.64094 sequence = TTTTTTCAGAAAATA Gene: ABC1961: Sodium/proline symporter	Oceanobacillus iheyensis HTE831 Gene: OB2368: Sodium/proline symporter	Paenibacillus sp. JDR-2	Sodium/proline symporter

CRON 25.
dppA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -43 score = 4.47507 sequence = ATTTGTTAGAATATT Gene: BSU12920: D-aminopeptidase (EC 3.4.11.-)	* Bacillus amyloliquefaciens FZB42 Site: position = -58 score = 4.47507 sequence = ATTTGTTAGAATATT Gene: RBAM_012770: D-aminopeptidase (EC 3.4.11.-)	* Bacillus pumilus SAFR-032 Site: position = -55 score = 4.96778 sequence = ATTTTTTAGAAAATT Gene: BPUM_1184: D-aminopeptidase (EC 3.4.11.-)	* Bacillus licheniformis DSM 13 Site: position = -61 score = 4.47507 sequence = ATTTGTTAGAATATT Gene: BLi01392: D-aminopeptidase (EC 3.4.11.-)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC0776: D-aminopeptidase (EC 3.4.11.-)	* Oceanobacillus iheyensis HTE831 Site: position = -41 score = 4.52531 sequence = AATTAATAGAAAATT Site: position = -96 score = 4.47344 sequence = AATATTCAGATTAAT Gene: OB2971: D-aminopeptidase (EC 3.4.11.-)	Paenibacillus sp. JDR-2	D-aminopeptidase (EC 3.4.11.-)
dppB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU12930: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_012780: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	Bacillus pumilus SAFR-032 Gene: BPUM_1185: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	Bacillus licheniformis DSM 13 Gene: BLi01393: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC0777: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	Oceanobacillus iheyensis HTE831 Gene: OB2970: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	Paenibacillus sp. JDR-2	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)
dppC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU12940: Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_012790: Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	Bacillus pumilus SAFR-032 Gene: BPUM_1186: Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	Bacillus licheniformis DSM 13 Gene: BLi01394: Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC0778: Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	Oceanobacillus iheyensis HTE831 Gene: OB2969: Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)	Paenibacillus sp. JDR-2	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)
dppD	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU12950: Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_012800: Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	Bacillus pumilus SAFR-032 Gene: BPUM_1187: Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	Bacillus licheniformis DSM 13 Gene: BLi01395: Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC0779: Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	Oceanobacillus iheyensis HTE831 Gene: OB2968: Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)	Paenibacillus sp. JDR-2	Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)
dppE	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU12960: Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_012810: Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	Bacillus pumilus SAFR-032 Gene: BPUM_1188: Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	Bacillus licheniformis DSM 13 Gene: BLi01396: Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC0780: Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	Oceanobacillus iheyensis HTE831 Gene: OB2967: Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	Paenibacillus sp. JDR-2	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)

CRON 26.
BH2374	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	* Anoxybacillus flavithermus WK1 Site: position = -113 score = 4.96778 sequence = ATTTTTCAAAAAATT Gene: Aflv_1525: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3)	Geobacillus kaustophilus HTA426 Gene: GK1301: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3)	* Bacillus cereus ATCC 14579 Site: position = -214 score = 4.53473 sequence = AAAATTCAGAAAAAT Gene: BC3774: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3)	* Bacillus halodurans C-125 Site: position = -121 score = 4.68021 sequence = ATTTGTCAAAAAATT Gene: BH2374: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3)	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_3373: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3)	2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3)
BH2373	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1 Gene: Aflv_1524: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3)	Geobacillus kaustophilus HTA426 Gene: GK1302: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3)	Bacillus cereus ATCC 14579 Gene: BC3773: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3)	Bacillus halodurans C-125 Gene: BH2373: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3)	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_3372: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3)	2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3)

CRON 27.
spo0A	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU24220: Stage 0 sporulation two-component response regulator (Spo0A)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_022550: Stage 0 sporulation two-component response regulator (Spo0A)	* Bacillus pumilus SAFR-032 Site: position = -111 score = 4.43692 sequence = ATTATTCGGAAAATT Gene: BPUM_2154: Stage 0 sporulation two-component response regulator (Spo0A)	Bacillus licheniformis DSM 13 Gene: BLi02593: Stage 0 sporulation two-component response regulator (Spo0A)	* Anoxybacillus flavithermus WK1 Site: position = -120 score = 4.56826 sequence = TATTTTATGAAAAAT Gene: Aflv_0953: Stage 0 sporulation two-component response regulator (Spo0A)	* Geobacillus kaustophilus HTA426 Site: position = -96 score = 4.69528 sequence = TATTTTTTGAAAAAT Gene: GK2387: Stage 0 sporulation two-component response regulator (Spo0A)	* Bacillus cereus ATCC 14579 Site: position = -84 score = 4.6961 sequence = AATTTTCACACAATT Gene: BC4170: Stage 0 sporulation two-component response regulator (Spo0A)	* Bacillus halodurans C-125 Site: position = -89 score = 4.95835 sequence = AATTTTTTTAAAATT Gene: BH2773: Stage 0 sporulation two-component response regulator (Spo0A)	Bacillus clausii KSM-K16 Gene: ABC2457: Stage 0 sporulation two-component response regulator (Spo0A)	Oceanobacillus iheyensis HTE831 Gene: OB1872: Stage 0 sporulation two-component response regulator (Spo0A)	Paenibacillus sp. JDR-2 Gene: Pjdr2_2318: Stage 0 sporulation two-component response regulator (Spo0A)	Stage 0 sporulation two-component response regulator (Spo0A)

CRON 28.
liuR	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	* Anoxybacillus flavithermus WK1 Site: position = -25 score = 4.87048 sequence = AAAATTCAGAAAATT Gene: Aflv_1279: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family	* Geobacillus kaustophilus HTA426 Site: position = -36 score = 4.66534 sequence = AAAATTCAGAATATT Gene: GK1490: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Aflv_1280	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1 Gene: Aflv_1280: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	Geobacillus kaustophilus HTA426 Gene: GK1491: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Aflv_1281	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1 Gene: Aflv_1281: Acyl-CoA dehydrogenase (EC 1.3.99.3)	Geobacillus kaustophilus HTA426 Gene: GK1492: Acyl-CoA dehydrogenase (EC 1.3.99.3)	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Acyl-CoA dehydrogenase (EC 1.3.99.3)
yuxK	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU31500: Possible thiol-disulphide dehydrogenase	Bacillus amyloliquefaciens FZB42 Gene: RBAM_028600: Possible thiol-disulphide dehydrogenase	Bacillus pumilus SAFR-032 Gene: BPUM_2818: Possible thiol-disulphide dehydrogenase	Bacillus licheniformis DSM 13 Gene: BLi03332: Possible thiol-disulphide dehydrogenase	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1495: Possible thiol-disulphide dehydrogenase	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH0852: Possible thiol-disulphide dehydrogenase	Bacillus clausii KSM-K16 Gene: ABC1199: Possible thiol-disulphide dehydrogenase	Oceanobacillus iheyensis HTE831 Gene: OB2278: Possible thiol-disulphide dehydrogenase	Paenibacillus sp. JDR-2 Gene: Pjdr2_4399: Possible thiol-disulphide dehydrogenase	Possible thiol-disulphide dehydrogenase
yuxJ	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -135 score = 4.39409 sequence = CATTTTCTAAAAATA Gene: BSU31480: MFS family major facilitator transporter	* Bacillus amyloliquefaciens FZB42 Site: position = -178 score = 4.39409 sequence = CATTTTCTAAAAATA Gene: RBAM_028580: MFS family major facilitator transporter	Bacillus pumilus SAFR-032 Gene: BPUM_2816: MFS family major facilitator transporter	* Bacillus licheniformis DSM 13 Site: position = -68 score = 4.61226 sequence = TATTTTCTGAAAATG Gene: BLi03330: MFS family major facilitator transporter	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	MFS family major facilitator transporter
pbpD	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU31490: Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_028590: Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	Bacillus pumilus SAFR-032 Gene: BPUM_2817: Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	Bacillus licheniformis DSM 13 Gene: BLi03331: Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC1473: Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)

CRON 29.
murQ	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -48 score = 4.63545 sequence = AATATACTGAATATT Site: position = -95 score = 4.41137 sequence = AAATTTCAAAAATTT Gene: BSU01700: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_002180: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)	* Bacillus pumilus SAFR-032 Site: position = -131 score = 4.53832 sequence = TATTTTCTAACTATT Gene: BPUM_0158: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)	2 Bacillus licheniformis DSM 13* Site: position = -53 score = 4.84058 sequence = AATATACTGAAAATT Gene: BLi00191: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-) Gene: BLi04351: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC0841: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)	Bacillus halodurans C-125 Gene: BH3575: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)	Bacillus clausii KSM-K16 Gene: ABC0311: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)	Oceanobacillus iheyensis HTE831 Gene: OB0614: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)	Paenibacillus sp. JDR-2	N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)
murR	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU01690: Transcriptional regulator of muropeptide rescue pathway operon, RpiR family	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032 Gene: BPUM_0157: Transcriptional regulator of muropeptide rescue pathway operon, RpiR family	Bacillus licheniformis DSM 13 Gene: BLi00190: Transcriptional regulator of muropeptide rescue pathway operon, RpiR family	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Transcriptional regulator of muropeptide rescue pathway operon, RpiR family
ybbF	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU01680: PTS system, IIB component (EC 2.7.1.69) / PTS system, IIC component (EC 2.7.1.69)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_002170: PTS system, IIB component (EC 2.7.1.69) / PTS system, IIC component (EC 2.7.1.69)	Bacillus pumilus SAFR-032 Gene: BPUM_0156: PTS system, IIB component (EC 2.7.1.69) / PTS system, IIC component (EC 2.7.1.69)	Bacillus licheniformis DSM 13 Gene: BLi00189: PTS system, IIB component (EC 2.7.1.69) / PTS system, IIC component (EC 2.7.1.69)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC0842: PTS system, IIB component (EC 2.7.1.69) / PTS system, IIC component (EC 2.7.1.69)	Bacillus halodurans C-125 Gene: BH3574: PTS system, IIB component (EC 2.7.1.69) / PTS system, IIC component (EC 2.7.1.69)	Bacillus clausii KSM-K16 Gene: ABC0312: PTS system, IIB component (EC 2.7.1.69) / PTS system, IIC component (EC 2.7.1.69)	Oceanobacillus iheyensis HTE831 Gene: OB0615: PTS system, IIB component (EC 2.7.1.69) / PTS system, IIC component (EC 2.7.1.69)	Paenibacillus sp. JDR-2	PTS system, IIB component (EC 2.7.1.69) / PTS system, IIC component (EC 2.7.1.69)
amiE	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU01670: Amidase of hydrolyzes the N-acetylmuramyl- L-Ala bond of MurNAc peptides	Bacillus amyloliquefaciens FZB42 Gene: RBAM_002160: Amidase of hydrolyzes the N-acetylmuramyl- L-Ala bond of MurNAc peptides	Bacillus pumilus SAFR-032 Gene: BPUM_0155: Amidase of hydrolyzes the N-acetylmuramyl- L-Ala bond of MurNAc peptides	Bacillus licheniformis DSM 13 Gene: BLi00188: Amidase of hydrolyzes the N-acetylmuramyl- L-Ala bond of MurNAc peptides	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Amidase of hydrolyzes the N-acetylmuramyl- L-Ala bond of MurNAc peptides
nagZ	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU01660: Beta--N-acetylglucosaminidase	Bacillus amyloliquefaciens FZB42 Gene: RBAM_002150: Beta--N-acetylglucosaminidase	Bacillus pumilus SAFR-032 Gene: BPUM_0154: Beta--N-acetylglucosaminidase	Bacillus licheniformis DSM 13 Gene: BLi00187: Beta--N-acetylglucosaminidase	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH0675: Beta--N-acetylglucosaminidase	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Beta--N-acetylglucosaminidase
ybbC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU01650: Hypothetical protein	Bacillus amyloliquefaciens FZB42 Gene: RBAM_002140: Hypothetical protein	Bacillus pumilus SAFR-032 Gene: BPUM_0153: Hypothetical protein	Bacillus licheniformis DSM 13 Gene: BLi00186: Hypothetical protein	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH0674: Hypothetical protein	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831 Gene: OB1304: Hypothetical protein	Paenibacillus sp. JDR-2	Hypothetical protein

CRON 30.
sspO	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -170 score = 4.6961 sequence = AATTTTCTCACAATT Gene: BSU17990: Small, acid-soluble spore protein O	* Bacillus amyloliquefaciens FZB42 Site: position = -169 score = 4.6961 sequence = AATTTTCTCACAATT Gene: RBAM_017790: Small, acid-soluble spore protein O	* Bacillus pumilus SAFR-032 Site: position = -152 score = 4.6961 sequence = AATTTTCTCACAATT Site: position = -183 score = 4.57214 sequence = AATTCTCAGAAAAAT Gene: BPUM_1698: Small, acid-soluble spore protein O	* Bacillus licheniformis DSM 13 Site: position = -171 score = 4.6961 sequence = AATTTTCTCACAATT Gene: BLi02046: Small, acid-soluble spore protein O	Anoxybacillus flavithermus WK1 Gene: Aflv_1493: Small, acid-soluble spore protein O	Geobacillus kaustophilus HTA426 Gene: GK1346: Small, acid-soluble spore protein O	Bacillus cereus ATCC 14579 Gene: BC3617: Small, acid-soluble spore protein O	Bacillus halodurans C-125 Gene: BH2300: Small, acid-soluble spore protein O	Bacillus clausii KSM-K16	* Oceanobacillus iheyensis HTE831 Site: position = -227 score = 4.53834 sequence = AATATTCTGTTAATT Gene: OB0266: Small, acid-soluble spore protein O	Paenibacillus sp. JDR-2	Small, acid-soluble spore protein O
sspP	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU17980: Small, acid-soluble spore protein P	Bacillus amyloliquefaciens FZB42 Gene: RBAM_017780: Small, acid-soluble spore protein P	Bacillus pumilus SAFR-032 Gene: BPUM_1697: Small, acid-soluble spore protein P	Bacillus licheniformis DSM 13 Gene: BLi02045: Small, acid-soluble spore protein P	Anoxybacillus flavithermus WK1 Gene: Aflv_1496: Small, acid-soluble spore protein P	Geobacillus kaustophilus HTA426 Gene: GK1344: Small, acid-soluble spore protein P	Bacillus cereus ATCC 14579 Gene: BC3620: Small, acid-soluble spore protein P	Bacillus halodurans C-125 Gene: BH2301: Small, acid-soluble spore protein P	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831 Gene: OB1020: Small, acid-soluble spore protein P	Paenibacillus sp. JDR-2 Gene: Pjdr2_0096: Small, acid-soluble spore protein P	Small, acid-soluble spore protein P

CRON 31.
dat	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	* Bacillus pumilus SAFR-032 Site: position = -54 score = 4.57417 sequence = AAGTGTCTGAAAATT Site: position = -166 score = 4.71371 sequence = AATTGTCTAATAATT Gene: BPUM_2473: Branched-chain amino acid aminotransferase (EC 2.6.1.42)	* Bacillus licheniformis DSM 13 Site: position = -192 score = 4.71371 sequence = AATTGTCTAATAATT Gene: BLi02962: Branched-chain amino acid aminotransferase (EC 2.6.1.42)	* Anoxybacillus flavithermus WK1 Site: position = -79 score = 4.66554 sequence = AATTTTCAAATAAAT Site: position = -136 score = 4.79615 sequence = AATAATCAAAAAATT Gene: Aflv_0590: Branched-chain amino acid aminotransferase (EC 2.6.1.42)	Geobacillus kaustophilus HTA426 Gene: GK2662: Branched-chain amino acid aminotransferase (EC 2.6.1.42)	* Bacillus cereus ATCC 14579 Site: position = -88 score = 5.30353 sequence = AATTTTCTAAAAATT Site: position = -167 score = 4.36474 sequence = AATTTTTTGACTTTT Gene: BC1396: Branched-chain amino acid aminotransferase (EC 2.6.1.42)	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Branched-chain amino acid aminotransferase (EC 2.6.1.42)

CRON 32.
comK	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -225 score = 4.53871 sequence = AATTTTTAGACAACT Gene: BSU10420: Competence transcription factor	* Bacillus amyloliquefaciens FZB42 Site: position = -88 score = 4.21764 sequence = TATATTCAAAAAAAA Gene: RBAM_010600: Competence transcription factor	* Bacillus pumilus SAFR-032 Site: position = -222 score = 5.01596 sequence = AATTTTTAGACAATT Gene: BPUM_0978: Competence transcription factor	* Bacillus licheniformis DSM 13 Site: position = -205 score = 5.30353 sequence = AATTTTTAGAAAATT Gene: BLi01119: Competence transcription factor	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK0678: Competence transcription factor	Bacillus cereus ATCC 14579 Gene: BC1134: Competence transcription factor	Bacillus halodurans C-125	Bacillus clausii KSM-K16	* Oceanobacillus iheyensis HTE831 Site: position = -94 score = 4.49014 sequence = TTTATTCTAAAAATT Gene: OB1177: Competence transcription factor	Paenibacillus sp. JDR-2	Competence transcription factor

CRON 33.
gatC	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -172 score = 4.98081 sequence = AATATTCAGAAAAAT Gene: BSU06670: Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	* Bacillus amyloliquefaciens FZB42 Site: position = -163 score = 4.45229 sequence = AATTTTCTGACATAT Gene: RBAM_007070: Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	* Bacillus pumilus SAFR-032 Site: position = -182 score = 4.88371 sequence = AATTTTCTGATAAAT Gene: BPUM_0644: Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	* Bacillus licheniformis DSM 13 Site: position = -167 score = 5.11143 sequence = AATATTCTGAATATT Gene: BLi00730: Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	Anoxybacillus flavithermus WK1 Gene: Aflv_0258: Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	Geobacillus kaustophilus HTA426 Gene: GK0281: Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	Bacillus cereus ATCC 14579 Gene: BC0350: Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	Bacillus halodurans C-125 Gene: BH0665: Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	Bacillus clausii KSM-K16 Gene: ABC1096: Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	Oceanobacillus iheyensis HTE831 Gene: OB0764: Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	Paenibacillus sp. JDR-2 Gene: Pjdr2_1089: Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)	Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)
gatA	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU06680: Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_007080: Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	Bacillus pumilus SAFR-032 Gene: BPUM_0645: Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	Bacillus licheniformis DSM 13 Gene: BLi00731: Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	Anoxybacillus flavithermus WK1 Gene: Aflv_0259: Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	Geobacillus kaustophilus HTA426 Gene: GK0282: Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	Bacillus cereus ATCC 14579 Gene: BC0351: Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	Bacillus halodurans C-125 Gene: BH0666: Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	Bacillus clausii KSM-K16 Gene: ABC1097: Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	Oceanobacillus iheyensis HTE831 Gene: OB0765: Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	Paenibacillus sp. JDR-2 Gene: Pjdr2_1090: Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)	Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)
gatB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU06690: Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_007090: Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	Bacillus pumilus SAFR-032 Gene: BPUM_0646: Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	Bacillus licheniformis DSM 13 Gene: BLi00732: Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	Anoxybacillus flavithermus WK1 Gene: Aflv_0260: Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	Geobacillus kaustophilus HTA426 Gene: GK0283: Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	Bacillus cereus ATCC 14579 Gene: BC0352: Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	Bacillus halodurans C-125 Gene: BH0667: Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	Bacillus clausii KSM-K16 Gene: ABC1098: Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	Oceanobacillus iheyensis HTE831 Gene: OB0766: Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	Paenibacillus sp. JDR-2 Gene: Pjdr2_1091: Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)	Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)

CRON 34.
mcpC	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -62 score = 4.52365 sequence = TATTTTTTGATTATT Site: position = -98 score = 4.77322 sequence = AATTTTCAGTAAATA Gene: BSU13950: Methyl-accepting chemotaxis protein McpC	Bacillus amyloliquefaciens FZB42 Gene: RBAM_013710: Methyl-accepting chemotaxis protein McpC	Bacillus pumilus SAFR-032 Gene: BPUM_1284: Methyl-accepting chemotaxis protein McpC	Bacillus licheniformis DSM 13 Gene: BLi01604: Methyl-accepting chemotaxis protein McpC	Anoxybacillus flavithermus WK1 Gene: Aflv_1938: Methyl-accepting chemotaxis protein McpC	Geobacillus kaustophilus HTA426 Gene: GK1020: Methyl-accepting chemotaxis protein McpC	Bacillus cereus ATCC 14579 Gene: BC5009: Methyl-accepting chemotaxis protein McpC	2 Bacillus halodurans C-125* Gene: BH2275: Methyl-accepting chemotaxis protein McpC Site: position = -114 score = 4.54796 sequence = ATTTTTCAGATAAAT Gene: BH1827: Methyl-accepting chemotaxis protein McpC	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Methyl-accepting chemotaxis protein McpC

CRON 35.
hom	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -183 score = 4.52365 sequence = AATAATTAGAAAATA Gene: BSU32260: Homoserine dehydrogenase (EC 1.1.1.3)	* Bacillus amyloliquefaciens FZB42 Site: position = -185 score = 4.82589 sequence = AATATTTAGAAAATA Gene: RBAM_029370: Homoserine dehydrogenase (EC 1.1.1.3)	* Bacillus pumilus SAFR-032 Site: position = -185 score = 4.82589 sequence = AATATTTTGAAAATA Gene: BPUM_2888: Homoserine dehydrogenase (EC 1.1.1.3)	Bacillus licheniformis DSM 13 Gene: BLi03414: Homoserine dehydrogenase (EC 1.1.1.3)	* Anoxybacillus flavithermus WK1 Site: position = -88 score = 4.69528 sequence = TTTTTTTAGAAAATT Gene: Aflv_2414: Homoserine dehydrogenase (EC 1.1.1.3)	Geobacillus kaustophilus HTA426 Gene: GK2964: Homoserine dehydrogenase (EC 1.1.1.3)	Bacillus cereus ATCC 14579 Gene: BC5404: Homoserine dehydrogenase (EC 1.1.1.3)	Bacillus halodurans C-125 Gene: BH3422: Homoserine dehydrogenase (EC 1.1.1.3)	Bacillus clausii KSM-K16 Gene: ABC2942: Homoserine dehydrogenase (EC 1.1.1.3)	Oceanobacillus iheyensis HTE831 Gene: OB0466: Homoserine dehydrogenase (EC 1.1.1.3)	Paenibacillus sp. JDR-2 Gene: Pjdr2_4407: Homoserine dehydrogenase (EC 1.1.1.3)	Homoserine dehydrogenase (EC 1.1.1.3)
thrC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU32250: Threonine synthase (EC 4.2.3.1)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_029360: Threonine synthase (EC 4.2.3.1)	Bacillus pumilus SAFR-032 Gene: BPUM_2887: Threonine synthase (EC 4.2.3.1)	Bacillus licheniformis DSM 13 Gene: BLi03413: Threonine synthase (EC 4.2.3.1)	Anoxybacillus flavithermus WK1 Gene: Aflv_2413: Threonine synthase (EC 4.2.3.1)	Geobacillus kaustophilus HTA426 Gene: GK2963: Threonine synthase (EC 4.2.3.1)	Bacillus cereus ATCC 14579 Gene: BC1965: Threonine synthase (EC 4.2.3.1)	Bacillus halodurans C-125 Gene: BH3421: Threonine synthase (EC 4.2.3.1)	Bacillus clausii KSM-K16 Gene: ABC2941: Threonine synthase (EC 4.2.3.1)	Oceanobacillus iheyensis HTE831 Gene: OB0465: Threonine synthase (EC 4.2.3.1)	Paenibacillus sp. JDR-2	Threonine synthase (EC 4.2.3.1)
thrB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU32240: Homoserine kinase (EC 2.7.1.39)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_029350: Homoserine kinase (EC 2.7.1.39)	Bacillus pumilus SAFR-032 Gene: BPUM_2886: Homoserine kinase (EC 2.7.1.39)	Bacillus licheniformis DSM 13 Gene: BLi03412: Homoserine kinase (EC 2.7.1.39)	Anoxybacillus flavithermus WK1 Gene: Aflv_2412: Homoserine kinase (EC 2.7.1.39)	Geobacillus kaustophilus HTA426 Gene: GK2962: Homoserine kinase (EC 2.7.1.39)	Bacillus cereus ATCC 14579 Gene: BC1966: Homoserine kinase (EC 2.7.1.39)	Bacillus halodurans C-125 Gene: BH3420: Homoserine kinase (EC 2.7.1.39)	Bacillus clausii KSM-K16 Gene: ABC2940: Homoserine kinase (EC 2.7.1.39)	Oceanobacillus iheyensis HTE831 Gene: OB0464: Homoserine kinase (EC 2.7.1.39)	Paenibacillus sp. JDR-2 Gene: Pjdr2_4406: Homoserine kinase (EC 2.7.1.39)	Homoserine kinase (EC 2.7.1.39)

CRON 36.
ilvB	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -633 score = 4.11522 sequence = ATTAATAAAAAAATT Site: position = -544 score = 4.71371 sequence = AATTGTCTAATAATT Gene: BSU28310: Acetolactate synthase large subunit (EC 2.2.1.6)	* Bacillus amyloliquefaciens FZB42 Site: position = -464 score = 4.71371 sequence = AATTGTCTAATAATT Gene: RBAM_025370: Acetolactate synthase large subunit (EC 2.2.1.6)	Bacillus pumilus SAFR-032 Gene: BPUM_2472: Acetolactate synthase large subunit (EC 2.2.1.6)	Bacillus licheniformis DSM 13 Gene: BLi02961: Acetolactate synthase large subunit (EC 2.2.1.6)	Anoxybacillus flavithermus WK1 Gene: Aflv_0591: Acetolactate synthase large subunit (EC 2.2.1.6)	Geobacillus kaustophilus HTA426 Gene: GK2661: Acetolactate synthase large subunit (EC 2.2.1.6)	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH3061: Acetolactate synthase large subunit (EC 2.2.1.6)	Bacillus clausii KSM-K16 Gene: ABC2645: Acetolactate synthase large subunit (EC 2.2.1.6)	* Oceanobacillus iheyensis HTE831 Site: position = -508 score = 4.10074 sequence = AATAATTAAAAAACT Gene: OB2623: Acetolactate synthase large subunit (EC 2.2.1.6)	3 Paenibacillus sp. JDR-2 Gene: Pjdr2_1302: Acetolactate synthase large subunit (EC 2.2.1.6) Gene: Pjdr2_4086: Acetolactate synthase large subunit (EC 2.2.1.6) Gene: Pjdr2_2907: Acetolactate synthase large subunit (EC 2.2.1.6)	Acetolactate synthase large subunit (EC 2.2.1.6)
ilvH	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU28300: Acetolactate synthase small subunit (EC 2.2.1.6)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_025360: Acetolactate synthase small subunit (EC 2.2.1.6)	Bacillus pumilus SAFR-032 Gene: BPUM_2471: Acetolactate synthase small subunit (EC 2.2.1.6)	Bacillus licheniformis DSM 13 Gene: BLi02960: Acetolactate synthase small subunit (EC 2.2.1.6)	Anoxybacillus flavithermus WK1 Gene: Aflv_0592: Acetolactate synthase small subunit (EC 2.2.1.6)	Geobacillus kaustophilus HTA426 Gene: GK2660: Acetolactate synthase small subunit (EC 2.2.1.6)	Bacillus cereus ATCC 14579 Gene: BC1398: Acetolactate synthase small subunit (EC 2.2.1.6)	Bacillus halodurans C-125 Gene: BH3060: Acetolactate synthase small subunit (EC 2.2.1.6)	Bacillus clausii KSM-K16 Gene: ABC2644: Acetolactate synthase small subunit (EC 2.2.1.6)	Oceanobacillus iheyensis HTE831 Gene: OB2622: Acetolactate synthase small subunit (EC 2.2.1.6)	2 Paenibacillus sp. JDR-2 Gene: Pjdr2_1303: Acetolactate synthase small subunit (EC 2.2.1.6) Gene: Pjdr2_2908: Acetolactate synthase small subunit (EC 2.2.1.6)	Acetolactate synthase small subunit (EC 2.2.1.6)
ilvC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU28290: Ketol-acid reductoisomerase (EC 1.1.1.86)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_025350: Ketol-acid reductoisomerase (EC 1.1.1.86)	Bacillus pumilus SAFR-032 Gene: BPUM_2470: Ketol-acid reductoisomerase (EC 1.1.1.86)	Bacillus licheniformis DSM 13 Gene: BLi02959: Ketol-acid reductoisomerase (EC 1.1.1.86)	Anoxybacillus flavithermus WK1 Gene: Aflv_0593: Ketol-acid reductoisomerase (EC 1.1.1.86)	Geobacillus kaustophilus HTA426 Gene: GK2659: Ketol-acid reductoisomerase (EC 1.1.1.86)	2 Bacillus cereus ATCC 14579 Gene: BC1779: Ketol-acid reductoisomerase (EC 1.1.1.86) Gene: BC1399: Ketol-acid reductoisomerase (EC 1.1.1.86)	Bacillus halodurans C-125 Gene: BH3059: Ketol-acid reductoisomerase (EC 1.1.1.86)	Bacillus clausii KSM-K16 Gene: ABC2643: Ketol-acid reductoisomerase (EC 1.1.1.86)	Oceanobacillus iheyensis HTE831 Gene: OB2621: Ketol-acid reductoisomerase (EC 1.1.1.86)	Paenibacillus sp. JDR-2 Gene: Pjdr2_1304: Ketol-acid reductoisomerase (EC 1.1.1.86)	Ketol-acid reductoisomerase (EC 1.1.1.86)
leuA	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU28280: 2-isopropylmalate synthase (EC 2.3.3.13)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_025340: 2-isopropylmalate synthase (EC 2.3.3.13)	Bacillus pumilus SAFR-032 Gene: BPUM_2469: 2-isopropylmalate synthase (EC 2.3.3.13)	Bacillus licheniformis DSM 13 Gene: BLi02958: 2-isopropylmalate synthase (EC 2.3.3.13)	Anoxybacillus flavithermus WK1 Gene: Aflv_0594: 2-isopropylmalate synthase (EC 2.3.3.13)	Geobacillus kaustophilus HTA426 Gene: GK2658: 2-isopropylmalate synthase (EC 2.3.3.13)	Bacillus cereus ATCC 14579 Gene: BC1400: 2-isopropylmalate synthase (EC 2.3.3.13)	Bacillus halodurans C-125 Gene: BH3058: 2-isopropylmalate synthase (EC 2.3.3.13)	Bacillus clausii KSM-K16 Gene: ABC2642: 2-isopropylmalate synthase (EC 2.3.3.13)	Oceanobacillus iheyensis HTE831 Gene: OB2620: 2-isopropylmalate synthase (EC 2.3.3.13)	2 Paenibacillus sp. JDR-2 Gene: Pjdr2_1026: 2-isopropylmalate synthase (EC 2.3.3.13) Gene: Pjdr2_1305: 2-isopropylmalate synthase (EC 2.3.3.13)	2-isopropylmalate synthase (EC 2.3.3.13)
leuB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU28270: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_025330: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)	Bacillus pumilus SAFR-032 Gene: BPUM_2468: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)	Bacillus licheniformis DSM 13 Gene: BLi02957: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)	Anoxybacillus flavithermus WK1 Gene: Aflv_0595: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)	Geobacillus kaustophilus HTA426 Gene: GK2657: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)	Bacillus cereus ATCC 14579 Gene: BC1401: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)	Bacillus halodurans C-125 Gene: BH3057: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)	Bacillus clausii KSM-K16 Gene: ABC2641: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)	Oceanobacillus iheyensis HTE831 Gene: OB2619: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)	Paenibacillus sp. JDR-2	3-isopropylmalate dehydrogenase (EC 1.1.1.85)
leuC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU28260: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_025320: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	Bacillus pumilus SAFR-032 Gene: BPUM_2467: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	Bacillus licheniformis DSM 13 Gene: BLi02956: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	Anoxybacillus flavithermus WK1 Gene: Aflv_0596: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	Geobacillus kaustophilus HTA426 Gene: GK2656: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	Bacillus cereus ATCC 14579 Gene: BC1402: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	Bacillus halodurans C-125 Gene: BH3056: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	Bacillus clausii KSM-K16 Gene: ABC2640: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	Oceanobacillus iheyensis HTE831 Gene: OB2618: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	Paenibacillus sp. JDR-2 Gene: Pjdr2_2473: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
leuD	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU28250: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_025310: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	Bacillus pumilus SAFR-032 Gene: BPUM_2466: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	Bacillus licheniformis DSM 13 Gene: BLi02955: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	Anoxybacillus flavithermus WK1 Gene: Aflv_0597: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	Geobacillus kaustophilus HTA426 Gene: GK2655: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	Bacillus cereus ATCC 14579 Gene: BC1403: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	Bacillus halodurans C-125 Gene: BH3055: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	Bacillus clausii KSM-K16 Gene: ABC2639: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	Oceanobacillus iheyensis HTE831 Gene: OB2617: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	Paenibacillus sp. JDR-2 Gene: Pjdr2_2474: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
tdcB	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831 Gene: OB2616: Threonine dehydratase (EC 4.3.1.19)	Paenibacillus sp. JDR-2	Threonine dehydratase (EC 4.3.1.19)
Pjdr2_1025	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	* Paenibacillus sp. JDR-2 Site: position = -607 score = 4.55301 sequence = AATTGACAGAATATT Gene: Pjdr2_1025: Hypothetical protein	Hypothetical protein

CRON 37.
hpr	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -90 score = 4.44737 sequence = ATTTATTAAAAAATT Gene: BSU09990: Transcriptional repressor of sporulation and extracellular protein, MarR family	Bacillus amyloliquefaciens FZB42 Gene: RBAM_010230: Transcriptional repressor of sporulation and extracellular protein, MarR family	Bacillus pumilus SAFR-032 Gene: BPUM_0944: Transcriptional repressor of sporulation and extracellular protein, MarR family	* Bacillus licheniformis DSM 13 Site: position = -93 score = 4.74961 sequence = ATTTTTTAAAAAATT Gene: BLi01078: Transcriptional repressor of sporulation and extracellular protein, MarR family	* Anoxybacillus flavithermus WK1 Site: position = -87 score = 4.44737 sequence = ATTTATTAAAAAATT Gene: Aflv_2290: Transcriptional repressor of sporulation and extracellular protein, MarR family	Geobacillus kaustophilus HTA426 Gene: GK0652: Transcriptional repressor of sporulation and extracellular protein, MarR family	Bacillus cereus ATCC 14579 Gene: BC1047: Transcriptional repressor of sporulation and extracellular protein, MarR family	* Bacillus halodurans C-125 Site: position = -148 score = 4.74961 sequence = ATTTTTTAAAAAATT Gene: BH1185: Transcriptional repressor of sporulation and extracellular protein, MarR family	Bacillus clausii KSM-K16 Gene: ABC1529: Transcriptional repressor of sporulation and extracellular protein, MarR family	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Transcriptional repressor of sporulation and extracellular protein, MarR family

CRON 38.
kapD	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -90 score = 4.39409 sequence = TATTTTTAGAAAATG Gene: BSU31470: KapD, inhibitor of KinA pathway to sporulation	* Bacillus amyloliquefaciens FZB42 Site: position = -93 score = 4.39409 sequence = TATTTTTAGAAAATG Gene: RBAM_028570: KapD, inhibitor of KinA pathway to sporulation	Bacillus pumilus SAFR-032 Gene: BPUM_2815: KapD, inhibitor of KinA pathway to sporulation	* Bacillus licheniformis DSM 13 Site: position = -165 score = 4.61226 sequence = CATTTTCAGAAAATA Gene: BLi03329: KapD, inhibitor of KinA pathway to sporulation	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK2934: KapD, inhibitor of KinA pathway to sporulation	* Bacillus cereus ATCC 14579 Site: position = -142 score = 4.54448 sequence = ATTTTTTAAAATATT Gene: BC4910: KapD, inhibitor of KinA pathway to sporulation	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	KapD, inhibitor of KinA pathway to sporulation

CRON 39.
metA	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU21910: Homoserine O-succinyltransferase (EC 2.3.1.46)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_020050: Homoserine O-succinyltransferase (EC 2.3.1.46)	Bacillus pumilus SAFR-032 Gene: BPUM_1927: Homoserine O-succinyltransferase (EC 2.3.1.46)	Bacillus licheniformis DSM 13 Gene: BLi02329: Homoserine O-succinyltransferase (EC 2.3.1.46)	* Anoxybacillus flavithermus WK1 Site: position = -51 score = 5.30353 sequence = AATTTTCTAAAAATT Gene: Aflv_1464: Homoserine O-succinyltransferase (EC 2.3.1.46)	Geobacillus kaustophilus HTA426 Gene: GK1787: Homoserine O-succinyltransferase (EC 2.3.1.46)	Bacillus cereus ATCC 14579 Gene: BC5405: Homoserine O-succinyltransferase (EC 2.3.1.46)	Bacillus halodurans C-125 Gene: BH2280: Homoserine O-succinyltransferase (EC 2.3.1.46)	Bacillus clausii KSM-K16 Gene: ABC2149: Homoserine O-succinyltransferase (EC 2.3.1.46)	* Oceanobacillus iheyensis HTE831 Site: position = -89 score = 4.39304 sequence = AATTTTTAGATAAAA Gene: OB0438: Homoserine O-succinyltransferase (EC 2.3.1.46)	Paenibacillus sp. JDR-2 Gene: Pjdr2_4799: Homoserine O-succinyltransferase (EC 2.3.1.46)	Homoserine O-succinyltransferase (EC 2.3.1.46)

CRON 40.
dppC	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	* Bacillus halodurans C-125 Site: position = -46 score = 4.47507 sequence = ATTTGTCAAAATATT Gene: BH0030: Oligopeptide ABC transporter permease	Bacillus clausii KSM-K16 Gene: ABC0032: Oligopeptide ABC transporter permease	* Oceanobacillus iheyensis HTE831 Site: position = -112 score = 4.493 sequence = TATTTTTACAAAATT Gene: OB3067: Oligopeptide ABC transporter permease	Paenibacillus sp. JDR-2	Oligopeptide ABC transporter permease
dppB	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH0029: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	Bacillus clausii KSM-K16 Gene: ABC0031: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	Oceanobacillus iheyensis HTE831 Gene: OB3068: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)	Paenibacillus sp. JDR-2	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)
oppD	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH0028: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	Bacillus clausii KSM-K16 Gene: ABC0030: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	Oceanobacillus iheyensis HTE831 Gene: OB3069: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	Paenibacillus sp. JDR-2	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
oppF	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH0027: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	Bacillus clausii KSM-K16 Gene: ABC0029: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	Oceanobacillus iheyensis HTE831 Gene: OB3070: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	Paenibacillus sp. JDR-2	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)

CRON 41.
fadN	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU32840: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	* Bacillus amyloliquefaciens FZB42 Site: position = -132 score = 4.51226 sequence = AAATTTAAAAAAATT Gene: RBAM_029920: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	Bacillus pumilus SAFR-032 Gene: BPUM_2942: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	* Bacillus licheniformis DSM 13 Site: position = -132 score = 4.4244 sequence = AAAATTCAGAAATTT Gene: BLi03466: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK3008: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	* Bacillus cereus ATCC 14579 Site: position = -141 score = 4.46736 sequence = TTATTTCAGAAAATT Gene: BC5004: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	* Bacillus halodurans C-125 Site: position = -134 score = 4.78159 sequence = AATTTTCAGAAAATC Gene: BH3488: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	Bacillus clausii KSM-K16 Gene: ABC2990: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	Oceanobacillus iheyensis HTE831 Gene: OB2395: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	Paenibacillus sp. JDR-2 Gene: Pjdr2_0489: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
fadA	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU32830: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_029910: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)	Bacillus pumilus SAFR-032 Gene: BPUM_2941: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)	Bacillus licheniformis DSM 13 Gene: BLi03465: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)	Anoxybacillus flavithermus WK1 Gene: Aflv_2481: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)	Geobacillus kaustophilus HTA426 Gene: GK3007: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)	Bacillus cereus ATCC 14579 Gene: BC5003: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)	Bacillus halodurans C-125 Gene: BH3487: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)	Bacillus clausii KSM-K16 Gene: ABC2989: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)	Oceanobacillus iheyensis HTE831 Gene: OB2394: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)	Paenibacillus sp. JDR-2 Gene: Pjdr2_0490: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
fadE	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU32820: Acyl-CoA dehydrogenase (EC 1.3.99.3)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_029900: Acyl-CoA dehydrogenase (EC 1.3.99.3)	Bacillus pumilus SAFR-032 Gene: BPUM_2940: Acyl-CoA dehydrogenase (EC 1.3.99.3)	Bacillus licheniformis DSM 13 Gene: BLi03464: Acyl-CoA dehydrogenase (EC 1.3.99.3)	Anoxybacillus flavithermus WK1 Gene: Aflv_2480: Acyl-CoA dehydrogenase (EC 1.3.99.3)	Geobacillus kaustophilus HTA426 Gene: GK3006: Acyl-CoA dehydrogenase (EC 1.3.99.3)	Bacillus cereus ATCC 14579 Gene: BC5002: Acyl-CoA dehydrogenase (EC 1.3.99.3)	Bacillus halodurans C-125 Gene: BH3486: Acyl-CoA dehydrogenase (EC 1.3.99.3)	Bacillus clausii KSM-K16 Gene: ABC2988: Acyl-CoA dehydrogenase (EC 1.3.99.3)	Oceanobacillus iheyensis HTE831 Gene: OB2393: Acyl-CoA dehydrogenase (EC 1.3.99.3)	Paenibacillus sp. JDR-2 Gene: Pjdr2_0491: Acyl-CoA dehydrogenase (EC 1.3.99.3)	Acyl-CoA dehydrogenase (EC 1.3.99.3)

CRON 42.
kinE	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -90 score = 5.07562 sequence = AATTTTCTGAAATTT Gene: BSU13530: Sporulation kinase E	* Bacillus amyloliquefaciens FZB42 Site: position = -90 score = 4.59837 sequence = AATTTTCTGAAATGT Gene: RBAM_013310: Sporulation kinase E	Bacillus pumilus SAFR-032 Gene: BPUM_1247: Sporulation kinase E	Bacillus licheniformis DSM 13 Gene: BLi01509: Sporulation kinase E	* Anoxybacillus flavithermus WK1 Site: position = -83 score = 4.77267 sequence = AATTTTCGGAATATT Gene: Aflv_2006: Sporulation kinase E	Geobacillus kaustophilus HTA426 Gene: GK0944: Sporulation kinase E	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Sporulation kinase E
ogt	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU13540: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_013320: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	Bacillus pumilus SAFR-032 Gene: BPUM_1248: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	Bacillus licheniformis DSM 13 Gene: BLi01510: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK0945: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH0393: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)

CRON 43.
yppF	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -76 score = 4.33561 sequence = AATTTTTTAAAAACA Gene: BSU22260: Hypothetical protein	* Bacillus amyloliquefaciens FZB42 Site: position = -76 score = 4.33561 sequence = AATTTTTTAAAAACA Gene: RBAM_020410: Hypothetical protein	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi02362: Hypothetical protein	* Anoxybacillus flavithermus WK1 Site: position = -68 score = 4.37981 sequence = AATTTTTTGAATTTA Gene: Aflv_1145: Hypothetical protein	Geobacillus kaustophilus HTA426 Gene: GK2163: Hypothetical protein	* Bacillus cereus ATCC 14579 Site: position = -79 score = 5.08536 sequence = AATTTTTAAAAAATT Gene: BC1558: Hypothetical protein	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Hypothetical protein

CRON 44.
yaaC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU00080: Conserved hypothetical protein	Bacillus amyloliquefaciens FZB42 Gene: RBAM_000110: Conserved hypothetical protein	* Bacillus pumilus SAFR-032 Site: position = -36 score = 5.03103 sequence = AATTTTTAGAAAATA Gene: BPUM_0503: Conserved hypothetical protein	* Bacillus licheniformis DSM 13 Site: position = -36 score = 5.03103 sequence = AATTTTTAGAAAATA Gene: BLi00013: Conserved hypothetical protein	Anoxybacillus flavithermus WK1 Gene: Aflv_0008: Conserved hypothetical protein	Geobacillus kaustophilus HTA426 Gene: GK0008: Conserved hypothetical protein	* Bacillus cereus ATCC 14579 Site: position = -30 score = 4.74345 sequence = AATTTTTAGACAATA Gene: BC0012: Conserved hypothetical protein	Bacillus halodurans C-125 Gene: BH0019: Conserved hypothetical protein	Bacillus clausii KSM-K16 Gene: ABC0010: Conserved hypothetical protein	Oceanobacillus iheyensis HTE831 Gene: OB0009: Conserved hypothetical protein	Paenibacillus sp. JDR-2	Conserved hypothetical protein

CRON 45.
cueR	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -139 score = 4.35007 sequence = AAAAATTTGAAAATT Gene: BSU09560: Transcriptional regulator, MerR family	Bacillus amyloliquefaciens FZB42 Gene: RBAM_009790: Transcriptional regulator, MerR family	* Bacillus pumilus SAFR-032 Site: position = -153 score = 5.01432 sequence = AATAATCTGAAAATT Gene: BPUM_0905: Transcriptional regulator, MerR family	* Bacillus licheniformis DSM 13 Site: position = -112 score = 4.4604 sequence = AATATTTAGATAAAT Gene: BLi01027: Transcriptional regulator, MerR family	Anoxybacillus flavithermus WK1 Gene: Aflv_2367: Transcriptional regulator, MerR family	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC3356: Transcriptional regulator, MerR family	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_2140: Transcriptional regulator, MerR family	Transcriptional regulator, MerR family

CRON 46.
glnQ	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -60 score = 5.04445 sequence = AATTTTCAGAAAAGT Gene: BSU27430: Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)	* Bacillus amyloliquefaciens FZB42 Site: position = -96 score = 4.63563 sequence = AATATTCATAAAAAT Site: position = -126 score = 4.50087 sequence = AATTATCAGAAATTA Gene: RBAM_024530: Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)	Bacillus pumilus SAFR-032 Gene: BPUM_2382: Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1976: Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)	Bacillus cereus ATCC 14579 Gene: BC0639: Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC0770: Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_2874: Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)	Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)
glnH	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU27440: Glutamine-binding protein	Bacillus amyloliquefaciens FZB42 Gene: RBAM_024540: Glutamine-binding protein	Bacillus pumilus SAFR-032 Gene: BPUM_2383: Glutamine-binding protein	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1977: Glutamine-binding protein	Bacillus cereus ATCC 14579 Gene: BC0640: Glutamine-binding protein	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC0771: Glutamine-binding protein	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_2875: Glutamine-binding protein	Glutamine-binding protein
glnM	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU27450: Glutamine transport system permease protein GlnM (TC 3.A.1.3.2)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_024550: Glutamine transport system permease protein GlnM (TC 3.A.1.3.2)	Bacillus pumilus SAFR-032 Gene: BPUM_2384: Glutamine transport system permease protein GlnM (TC 3.A.1.3.2)	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1978: Glutamine transport system permease protein GlnM (TC 3.A.1.3.2)	Bacillus cereus ATCC 14579 Gene: BC0641: Glutamine transport system permease protein GlnM (TC 3.A.1.3.2)	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC0772: Glutamine transport system permease protein GlnM (TC 3.A.1.3.2)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_2876: Glutamine transport system permease protein GlnM (TC 3.A.1.3.2)	Glutamine transport system permease protein GlnM (TC 3.A.1.3.2)
glnP	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU27460: Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_024560: Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)	Bacillus pumilus SAFR-032 Gene: BPUM_2385: Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1979: Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)	Bacillus cereus ATCC 14579 Gene: BC0642: Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC0773: Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_2877: Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)	Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)

CRON 47.
yhdT	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -200 score = 4.36474 sequence = AAAAGTCTAAAAATT Gene: BSU09590: Hemolysins and related proteins containing CBS domains	Bacillus amyloliquefaciens FZB42 Gene: RBAM_009820: Hemolysins and related proteins containing CBS domains	* Bacillus pumilus SAFR-032 Site: position = -196 score = 5.01432 sequence = AATTTTCAGATTATT Gene: BPUM_0906: Hemolysins and related proteins containing CBS domains	* Bacillus licheniformis DSM 13 Site: position = -217 score = 4.4604 sequence = ATTTATCTAAATATT Gene: BLi01028: Hemolysins and related proteins containing CBS domains	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Hemolysins and related proteins containing CBS domains

CRON 48.
yocR	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -141 score = 4.98081 sequence = AATTTTCTGAATAAT Gene: BSU19340: Putative sodium-dependent transporter	* Bacillus amyloliquefaciens FZB42 Site: position = -49 score = 4.4113 sequence = TATATTCTTACAATT Gene: RBAM_019090: Putative sodium-dependent transporter	Bacillus pumilus SAFR-032	* Bacillus licheniformis DSM 13 Site: position = -163 score = 4.77568 sequence = AATATTCTGAATAAT Gene: BLi02256: Putative sodium-dependent transporter	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH0217: Putative sodium-dependent transporter	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Putative sodium-dependent transporter

CRON 49.
nupN	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -102 score = 4.94695 sequence = TATTATCAGAAAATT Gene: BSU31540: Guanosine ABC transport system, substrate-binding component	* Bacillus amyloliquefaciens FZB42 Site: position = -243 score = 4.47711 sequence = ATTTTTTAAAAAATA Site: position = -244 score = 4.47711 sequence = TATTTTTTAAAAAAT Gene: RBAM_028640: Guanosine ABC transport system, substrate-binding component	* Bacillus pumilus SAFR-032 Site: position = -233 score = 4.47711 sequence = ATTTTTTTAAAAATA Gene: BPUM_2823: Guanosine ABC transport system, substrate-binding component	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1 Gene: Aflv_1675: Guanosine ABC transport system, substrate-binding component	Geobacillus kaustophilus HTA426 Gene: GK1283: Guanosine ABC transport system, substrate-binding component	Bacillus cereus ATCC 14579 Gene: BC3791: Guanosine ABC transport system, substrate-binding component	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC1089: Guanosine ABC transport system, substrate-binding component	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Guanosine ABC transport system, substrate-binding component
nupO	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU31550: Guanosine ABC transport system, ATP-binding protein	Bacillus amyloliquefaciens FZB42 Gene: RBAM_028650: Guanosine ABC transport system, ATP-binding protein	Bacillus pumilus SAFR-032 Gene: BPUM_2824: Guanosine ABC transport system, ATP-binding protein	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1 Gene: Aflv_1674: Guanosine ABC transport system, ATP-binding protein	Geobacillus kaustophilus HTA426 Gene: GK1284: Guanosine ABC transport system, ATP-binding protein	Bacillus cereus ATCC 14579 Gene: BC3790: Guanosine ABC transport system, ATP-binding protein	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC1090: Guanosine ABC transport system, ATP-binding protein	Oceanobacillus iheyensis HTE831 Gene: OB3387: Guanosine ABC transport system, ATP-binding protein	Paenibacillus sp. JDR-2 Gene: Pjdr2_0065: Guanosine ABC transport system, ATP-binding protein	Guanosine ABC transport system, ATP-binding protein
nupP	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU31560: Guanosine ABC transport system, permease component Ia (FIG025991) / Unspecified monosaccharide ABC transport system, permease component Ib (FIG143636)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_028660: Guanosine ABC transport system, permease component Ia (FIG025991) / Unspecified monosaccharide ABC transport system, permease component Ib (FIG143636)	Bacillus pumilus SAFR-032 Gene: BPUM_2825: Guanosine ABC transport system, permease component Ia (FIG025991) / Unspecified monosaccharide ABC transport system, permease component Ib (FIG143636)	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1 Gene: Aflv_1673: Guanosine ABC transport system, permease component Ia (FIG025991) / Unspecified monosaccharide ABC transport system, permease component Ib (FIG143636)	Geobacillus kaustophilus HTA426 Gene: GK1285: Guanosine ABC transport system, permease component Ia (FIG025991) / Unspecified monosaccharide ABC transport system, permease component Ib (FIG143636)	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC1091: Guanosine ABC transport system, permease component Ia (FIG025991) / Unspecified monosaccharide ABC transport system, permease component Ib (FIG143636)	Oceanobacillus iheyensis HTE831 Gene: OB3386: Guanosine ABC transport system, permease component Ia (FIG025991) / Unspecified monosaccharide ABC transport system, permease component Ib (FIG143636)	Paenibacillus sp. JDR-2 Gene: Pjdr2_0066: Guanosine ABC transport system, permease component Ia (FIG025991) / Unspecified monosaccharide ABC transport system, permease component Ib (FIG143636)	Guanosine ABC transport system, permease component Ia (FIG025991) / Unspecified monosaccharide ABC transport system, permease component Ib (FIG143636)
nupQ	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU31570: Guanosine ABC transport system, permease component 2	Bacillus amyloliquefaciens FZB42 Gene: RBAM_028670: Guanosine ABC transport system, permease component 2	Bacillus pumilus SAFR-032 Gene: BPUM_2826: Guanosine ABC transport system, permease component 2	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1 Gene: Aflv_1672: Guanosine ABC transport system, permease component 2	Geobacillus kaustophilus HTA426 Gene: GK1286: Guanosine ABC transport system, permease component 2	Bacillus cereus ATCC 14579 Gene: BC3788: Guanosine ABC transport system, permease component 2	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC1092: Guanosine ABC transport system, permease component 2	Oceanobacillus iheyensis HTE831 Gene: OB3385: Guanosine ABC transport system, permease component 2	Paenibacillus sp. JDR-2 Gene: Pjdr2_0067: Guanosine ABC transport system, permease component 2	Guanosine ABC transport system, permease component 2

CRON 50.
ABC3160	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	* Bacillus licheniformis DSM 13 Site: position = -29 score = 4.91345 sequence = TATTTTCTGAAAAAT Gene: BLi04226: Hypothetical protein	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	5 Bacillus clausii KSM-K16* Site: position = -191 score = 4.51226 sequence = AAATTTAAAAAAATT Gene: ABC3806: Hypothetical protein Gene: ABC1049: Hypothetical protein Gene: ABC1187: Hypothetical protein Gene: ABC3680: Hypothetical protein Gene: ABC3160: Hypothetical protein	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Hypothetical protein

CRON 51.
ykzI	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU14660: Hypothetical protein	Bacillus amyloliquefaciens FZB42 Gene: RBAM_014520: Hypothetical protein	Bacillus pumilus SAFR-032 Gene: BPUM_1364: Hypothetical protein	Bacillus licheniformis DSM 13 Gene: BLi01684: Hypothetical protein	* Anoxybacillus flavithermus WK1 Site: position = -39 score = 4.91345 sequence = AATTTTCAGAAAAAA Gene: Aflv_1883: Hypothetical protein	Geobacillus kaustophilus HTA426 Gene: GK1067: Hypothetical protein	* Bacillus cereus ATCC 14579 Site: position = -74 score = 4.56824 sequence = AAAAATCAGAAAATT Gene: BC3959: Hypothetical protein	Bacillus halodurans C-125 Gene: BH2636: Hypothetical protein	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831 Gene: OB1421: Hypothetical protein	Paenibacillus sp. JDR-2	Hypothetical protein
suhB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU14670: Inositol-1-monophosphatase (EC 3.1.3.25)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_014530: Inositol-1-monophosphatase (EC 3.1.3.25)	Bacillus pumilus SAFR-032 Gene: BPUM_1365: Inositol-1-monophosphatase (EC 3.1.3.25)	Bacillus licheniformis DSM 13 Gene: BLi01685: Inositol-1-monophosphatase (EC 3.1.3.25)	Anoxybacillus flavithermus WK1 Gene: Aflv_1882: Inositol-1-monophosphatase (EC 3.1.3.25)	Geobacillus kaustophilus HTA426 Gene: GK1068: Inositol-1-monophosphatase (EC 3.1.3.25)	Bacillus cereus ATCC 14579 Gene: BC3958: Inositol-1-monophosphatase (EC 3.1.3.25)	Bacillus halodurans C-125 Gene: BH2635: Inositol-1-monophosphatase (EC 3.1.3.25)	Bacillus clausii KSM-K16 Gene: ABC2404: Inositol-1-monophosphatase (EC 3.1.3.25)	Oceanobacillus iheyensis HTE831 Gene: OB1422: Inositol-1-monophosphatase (EC 3.1.3.25)	* Paenibacillus sp. JDR-2 Site: position = -129 score = 4.60772 sequence = AATATTTTAAAAATA Gene: Pjdr2_0817: Inositol-1-monophosphatase (EC 3.1.3.25)	Inositol-1-monophosphatase (EC 3.1.3.25)

CRON 52.
sdhC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU28450: Succinate dehydrogenase, cytochrome b subunit	* Bacillus amyloliquefaciens FZB42 Site: position = -98 score = 4.53998 sequence = AATTGTCAATAAATT Gene: RBAM_025520: Succinate dehydrogenase, cytochrome b subunit	* Bacillus pumilus SAFR-032 Site: position = -94 score = 4.53998 sequence = AATTGTCAATAAATT Site: position = -161 score = 4.53173 sequence = AAATTTCGGAAAATT Gene: BPUM_2503: Succinate dehydrogenase, cytochrome b subunit	* Bacillus licheniformis DSM 13 Site: position = -165 score = 4.85745 sequence = AAATTTTAGAAAATT Site: position = -184 score = 4.5217 sequence = AATTTTCAAAAATAT Gene: BLi02994: Succinate dehydrogenase, cytochrome b subunit	Anoxybacillus flavithermus WK1 Gene: Aflv_0580: Succinate dehydrogenase, cytochrome b subunit	Geobacillus kaustophilus HTA426 Gene: GK2673: Succinate dehydrogenase, cytochrome b subunit	Bacillus cereus ATCC 14579 Gene: BC4518: Succinate dehydrogenase, cytochrome b subunit	Bacillus halodurans C-125 Gene: BH3093: Succinate dehydrogenase, cytochrome b subunit	Bacillus clausii KSM-K16 Gene: ABC2664: Succinate dehydrogenase, cytochrome b subunit	Oceanobacillus iheyensis HTE831 Gene: OB2114: Succinate dehydrogenase, cytochrome b subunit	Paenibacillus sp. JDR-2 Gene: Pjdr2_4810: Succinate dehydrogenase, cytochrome b subunit	Succinate dehydrogenase, cytochrome b subunit
sdhA	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU28440: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_025510: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Bacillus pumilus SAFR-032 Gene: BPUM_2502: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Bacillus licheniformis DSM 13 Gene: BLi02993: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Anoxybacillus flavithermus WK1 Gene: Aflv_0581: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Geobacillus kaustophilus HTA426 Gene: GK2672: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Bacillus cereus ATCC 14579 Gene: BC4517: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Bacillus halodurans C-125 Gene: BH3092: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Bacillus clausii KSM-K16 Gene: ABC2663: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Oceanobacillus iheyensis HTE831 Gene: OB2113: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Paenibacillus sp. JDR-2 Gene: Pjdr2_4809: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
sdhB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU28430: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_025500: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	Bacillus pumilus SAFR-032 Gene: BPUM_2501: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	Bacillus licheniformis DSM 13 Gene: BLi02992: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	Anoxybacillus flavithermus WK1 Gene: Aflv_0582: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	Geobacillus kaustophilus HTA426 Gene: GK2671: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	Bacillus cereus ATCC 14579 Gene: BC4516: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	Bacillus halodurans C-125 Gene: BH3091: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	Bacillus clausii KSM-K16 Gene: ABC2662: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	Oceanobacillus iheyensis HTE831 Gene: OB2112: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	Paenibacillus sp. JDR-2 Gene: Pjdr2_4808: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)

CRON 53.
yslB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU28460: Predicted hydrocarbon binding protein (V4R domain)	* Bacillus amyloliquefaciens FZB42 Site: position = -213 score = 4.53998 sequence = AATTTATTGACAATT Gene: RBAM_025530: Predicted hydrocarbon binding protein (V4R domain)	* Bacillus pumilus SAFR-032 Site: position = -134 score = 4.53173 sequence = AATTTTCCGAAATTT Site: position = -201 score = 4.53998 sequence = AATTTATTGACAATT Gene: BPUM_2504: Predicted hydrocarbon binding protein (V4R domain)	* Bacillus licheniformis DSM 13 Site: position = -132 score = 4.5217 sequence = ATATTTTTGAAAATT Site: position = -151 score = 4.85745 sequence = AATTTTCTAAAATTT Gene: BLi02995: Predicted hydrocarbon binding protein (V4R domain)	Anoxybacillus flavithermus WK1 Gene: Aflv_0579: Predicted hydrocarbon binding protein (V4R domain)	Geobacillus kaustophilus HTA426 Gene: GK2674: Predicted hydrocarbon binding protein (V4R domain)	Bacillus cereus ATCC 14579 Gene: BC4519: Predicted hydrocarbon binding protein (V4R domain)	Bacillus halodurans C-125 Gene: BH3095: Predicted hydrocarbon binding protein (V4R domain)	Bacillus clausii KSM-K16 Gene: ABC2666: Predicted hydrocarbon binding protein (V4R domain)	Oceanobacillus iheyensis HTE831 Gene: OB2115: Predicted hydrocarbon binding protein (V4R domain)	Paenibacillus sp. JDR-2	Predicted hydrocarbon binding protein (V4R domain)

CRON 54.
ytkC	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -82 score = 4.8502 sequence = ATTTTTCTGAAAAAT Gene: BSU30640: Hypothetical membrane protein	* Bacillus amyloliquefaciens FZB42 Site: position = -70 score = 4.8502 sequence = ATTTTTCTGAAAAAT Gene: RBAM_027650: Hypothetical membrane protein	Bacillus pumilus SAFR-032 Gene: BPUM_2701: Hypothetical membrane protein	* Bacillus licheniformis DSM 13 Site: position = -88 score = 4.72838 sequence = AATTGTCAAACAATT Gene: BLi03206: Hypothetical membrane protein	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Hypothetical membrane protein

CRON 55.
rocR	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -34 score = 4.69887 sequence = AATATTAAGAAAATA Gene: BSU40350: Transcriptional activator of arginine utilization, Fis family	Bacillus amyloliquefaciens FZB42 Gene: RBAM_037260: Transcriptional activator of arginine utilization, Fis family	Bacillus pumilus SAFR-032 Gene: BPUM_3061: Transcriptional activator of arginine utilization, Fis family	* Bacillus licheniformis DSM 13 Site: position = -49 score = 4.79867 sequence = AATTTTCAGAACATT Gene: BLi00421: Transcriptional activator of arginine utilization, Fis family	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	* Bacillus cereus ATCC 14579 Site: position = -60 score = 4.83133 sequence = AATTTTAATAAAATT Gene: BC0473: Transcriptional activator of arginine utilization, Fis family	Bacillus halodurans C-125 Gene: BH3944: Transcriptional activator of arginine utilization, Fis family	Bacillus clausii KSM-K16 Gene: ABC0016: Transcriptional activator of arginine utilization, Fis family	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Transcriptional activator of arginine utilization, Fis family

CRON 56.
gltP	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU02340: Proton/glutamate symport protein @ Proton/aspartate symport protein	* Bacillus amyloliquefaciens FZB42 Site: position = -229 score = 4.35007 sequence = AATTATCAAAATTTT Gene: RBAM_002750: Proton/glutamate symport protein @ Proton/aspartate symport protein	* Bacillus pumilus SAFR-032 Site: position = -44 score = 4.5253 sequence = AAAATTCTTAAAATT Gene: BPUM_0501: Proton/glutamate symport protein @ Proton/aspartate symport protein	Bacillus licheniformis DSM 13 Gene: BLi03189: Proton/glutamate symport protein @ Proton/aspartate symport protein	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Proton/glutamate symport protein @ Proton/aspartate symport protein

CRON 57.
yhdG	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -181 score = 4.68021 sequence = ATTTTTCTAACAATT Gene: BSU09460: Amino acid permease	* Bacillus amyloliquefaciens FZB42 Site: position = -165 score = 4.82628 sequence = AATTTTCAAAAAAGT Gene: RBAM_009720: Amino acid permease	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Amino acid permease
yhdH	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU09470: Putative sodium-dependent transporter	Bacillus amyloliquefaciens FZB42 Gene: RBAM_009730: Putative sodium-dependent transporter	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi01013: Putative sodium-dependent transporter	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC1273: Putative sodium-dependent transporter	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Putative sodium-dependent transporter

CRON 58.
lcfA	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU28560: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_025620: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	Bacillus pumilus SAFR-032 Gene: BPUM_2513: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	Bacillus licheniformis DSM 13 Gene: BLi03003: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	* Anoxybacillus flavithermus WK1 Site: position = -56 score = 4.80311 sequence = AAATTTCAGAAAATA Gene: Aflv_0564: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	Geobacillus kaustophilus HTA426 Gene: GK2690: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	* Bacillus cereus ATCC 14579 Site: position = -277 score = 4.37777 sequence = AAAAGTCAGAATATT Gene: BC4526: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	2 Bacillus halodurans C-125 Gene: BH3104: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Gene: BH3103: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	Bacillus clausii KSM-K16 Gene: ABC2673: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	* Oceanobacillus iheyensis HTE831 Site: position = -67 score = 4.37981 sequence = AAAATTCAAAAAATA Gene: OB2122: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	Paenibacillus sp. JDR-2 Gene: Pjdr2_0492: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)

CRON 59.
ylmA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -52 score = 4.69927 sequence = AGTTTTATGAAAATT Gene: BSU15340: Putative ABC transporter, ATP-binding protein	* Bacillus amyloliquefaciens FZB42 Site: position = -42 score = 4.82628 sequence = AGTTTTTAGAAAATT Gene: RBAM_015170: Putative ABC transporter, ATP-binding protein	Bacillus pumilus SAFR-032 Gene: BPUM_1434: Putative ABC transporter, ATP-binding protein	* Bacillus licheniformis DSM 13 Site: position = -39 score = 4.67857 sequence = ATTTATCAGAATATT Gene: BLi01752: Putative ABC transporter, ATP-binding protein	Anoxybacillus flavithermus WK1 Gene: Aflv_1419: Putative ABC transporter, ATP-binding protein	Geobacillus kaustophilus HTA426 Gene: GK1677: Putative ABC transporter, ATP-binding protein	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_2252: Putative ABC transporter, ATP-binding protein	Putative ABC transporter, ATP-binding protein

CRON 60.
gldA	Bacillus subtilis subsp. subtilis str. 168	* Bacillus amyloliquefaciens FZB42 Site: position = -55 score = 4.48437 sequence = TATTTTCTGACAAGT Gene: RBAM_002680: Glycerol dehydrogenase (EC 1.1.1.6)	Bacillus pumilus SAFR-032 Gene: BPUM_0204: Glycerol dehydrogenase (EC 1.1.1.6)	Bacillus licheniformis DSM 13 Gene: BLi00258: Glycerol dehydrogenase (EC 1.1.1.6)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC0879: Glycerol dehydrogenase (EC 1.1.1.6)	* Oceanobacillus iheyensis HTE831 Site: position = -264 score = 4.38156 sequence = AATAGTATGATAATT Gene: OB3328: Glycerol dehydrogenase (EC 1.1.1.6)	Paenibacillus sp. JDR-2	Glycerol dehydrogenase (EC 1.1.1.6)

CRON 61.
glnA2	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	* Anoxybacillus flavithermus WK1 Site: position = -102 score = 4.3945 sequence = AAAATACAGAAAATT Gene: Aflv_1403: Glutamine synthetase type I (EC 6.3.1.2)	Geobacillus kaustophilus HTA426 Gene: GK1637: Glutamine synthetase type I (EC 6.3.1.2)	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH3867: Glutamine synthetase type I (EC 6.3.1.2)	* Bacillus clausii KSM-K16 Site: position = -122 score = 4.74182 sequence = TATTATCTGAATATT Gene: ABC3940: Glutamine synthetase type I (EC 6.3.1.2)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Glutamine synthetase type I (EC 6.3.1.2)

CRON 62.
chi	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi00338: Chitinase (EC 3.2.1.14)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC0429: Chitinase (EC 3.2.1.14)	* Bacillus halodurans C-125 Site: position = -125 score = 4.47749 sequence = TATTTTCTAAAGATT Gene: BH0916: Chitinase (EC 3.2.1.14)	* Bacillus clausii KSM-K16 Site: position = -117 score = 4.48714 sequence = TATTTTTCGAAAATT Gene: ABC0646: Chitinase (EC 3.2.1.14)	Oceanobacillus iheyensis HTE831 Gene: OB0791: Chitinase (EC 3.2.1.14)	Paenibacillus sp. JDR-2 Gene: Pjdr2_1796: Chitinase (EC 3.2.1.14)	Chitinase (EC 3.2.1.14)

CRON 63.
braB	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -44 score = 4.55301 sequence = AATTGACAGAATATT Site: position = -59 score = 4.65938 sequence = TATTATCTGACAATT Gene: BSU29600: Branched-chain amino acid transport system carrier protein	* Bacillus amyloliquefaciens FZB42 Site: position = -41 score = 4.55301 sequence = AATTGACAGAATATT Site: position = -56 score = 4.65938 sequence = TATTATCTGACAATT Gene: RBAM_026530: Branched-chain amino acid transport system carrier protein	* Bacillus pumilus SAFR-032 Site: position = -44 score = 4.53834 sequence = AATTAACAGAATATT Gene: BPUM_2605: Branched-chain amino acid transport system carrier protein	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Branched-chain amino acid transport system carrier protein

CRON 64.
metE2	2 Bacillus subtilis subsp. subtilis str. 168* Site: position = -225 score = 4.66914 sequence = AATATTAAGATAATT Gene: BSU38950: Methionine synthase II (cobalamin-independent) Gene: BSU38960: Methionine synthase II (cobalamin-independent)	* Bacillus amyloliquefaciens FZB42 Site: position = -188 score = 4.37256 sequence = TTTATTCTGAAAAAT Gene: RBAM_036120: Methionine synthase II (cobalamin-independent)	* Bacillus pumilus SAFR-032 Site: position = -227 score = 4.36313 sequence = TTTATTAAGAAAATT Gene: BPUM_3562: Methionine synthase II (cobalamin-independent)	Bacillus licheniformis DSM 13 Gene: BLi04187: Methionine synthase II (cobalamin-independent)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Methionine synthase II (cobalamin-independent)

CRON 65.
citR	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -68 score = 4.60772 sequence = AATATTTAAAAAATA Gene: BSU09430: Transcriptional regulator of citrate synthase, LysR family	* Bacillus amyloliquefaciens FZB42 Site: position = -67 score = 4.60772 sequence = AATATTTAAAAAATA Gene: RBAM_009690: Transcriptional regulator of citrate synthase, LysR family	Bacillus pumilus SAFR-032	* Bacillus licheniformis DSM 13 Site: position = -65 score = 4.60772 sequence = AATATTTAAAAAATA Gene: BLi01009: Transcriptional regulator of citrate synthase, LysR family	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC4042: Transcriptional regulator of citrate synthase, LysR family	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Transcriptional regulator of citrate synthase, LysR family

CRON 66.
ybgE	2 Bacillus subtilis subsp. subtilis str. 168* Site: position = -38 score = 4.59265 sequence = AATATTTAAACAATT Site: position = -118 score = 4.87048 sequence = AATATTCTGAAATTT Gene: BSU02390: Branched-chain amino acid aminotransferase (EC 2.6.1.42) Gene: BSU38550: Branched-chain amino acid aminotransferase (EC 2.6.1.42)	2 Bacillus amyloliquefaciens FZB42* Site: position = -152 score = 4.35007 sequence = AAAATTTTGATAATT Gene: RBAM_002760: Branched-chain amino acid aminotransferase (EC 2.6.1.42) Site: position = -48 score = 4.25154 sequence = TATTTTCAAATAAGT Gene: RBAM_035750: Branched-chain amino acid aminotransferase (EC 2.6.1.42)	* Bacillus pumilus SAFR-032 Site: position = -226 score = 4.391 sequence = AATTGTCAGATTAAT Gene: BPUM_3500: Branched-chain amino acid aminotransferase (EC 2.6.1.42)	Bacillus licheniformis DSM 13 Gene: BLi04084: Branched-chain amino acid aminotransferase (EC 2.6.1.42)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH2156: Branched-chain amino acid aminotransferase (EC 2.6.1.42)	Bacillus clausii KSM-K16 Gene: ABC1931: Branched-chain amino acid aminotransferase (EC 2.6.1.42)	Oceanobacillus iheyensis HTE831 Gene: OB2628: Branched-chain amino acid aminotransferase (EC 2.6.1.42)	Paenibacillus sp. JDR-2 Gene: Pjdr2_2507: Branched-chain amino acid aminotransferase (EC 2.6.1.42)	Branched-chain amino acid aminotransferase (EC 2.6.1.42)

CRON 67.
Aflv_2134	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	* Anoxybacillus flavithermus WK1 Site: position = -142 score = 4.56987 sequence = AATTTTCTAACATTT Gene: Aflv_2134: Uncharacterized membrane protein	Geobacillus kaustophilus HTA426 Gene: GK0810: Uncharacterized membrane protein	* Bacillus cereus ATCC 14579 Site: position = -83 score = 5.30353 sequence = AATTTTCAAAAAATT Gene: BC1178: Uncharacterized membrane protein	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Uncharacterized membrane protein

CRON 68.
ybxG	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -257 score = 4.79615 sequence = AATATTCAAATAATT Gene: BSU02060: Amino acid permease	* Bacillus amyloliquefaciens FZB42 Site: position = -268 score = 4.39663 sequence = TATTATCTTAATATT Gene: RBAM_002460: Amino acid permease	Bacillus pumilus SAFR-032 Gene: BPUM_0180: Amino acid permease	* Bacillus licheniformis DSM 13 Site: position = -241 score = 4.39663 sequence = TATTATAAGAATATT Gene: BLi00220: Amino acid permease	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC3455: Amino acid permease	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Amino acid permease

CRON 69.
ycgA	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU03020: Putative integral inner membrane protein	* Bacillus amyloliquefaciens FZB42 Site: position = -182 score = 4.56681 sequence = TATTTTCTGAATAGT Gene: RBAM_003260: Putative integral inner membrane protein	* Bacillus pumilus SAFR-032 Site: position = -52 score = 4.98081 sequence = ATTATTCTGAAAATT Gene: BPUM_0276: Putative integral inner membrane protein	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	3 Oceanobacillus iheyensis HTE831 Gene: OB0693: Putative integral inner membrane protein Gene: OB2711: Putative integral inner membrane protein Gene: OB2712: Putative integral inner membrane protein	Paenibacillus sp. JDR-2	Putative integral inner membrane protein

CRON 70.
glnB	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	* Bacillus licheniformis DSM 13 Site: position = -103 score = 4.96778 sequence = ATTTTTTTGAAAATT Gene: BLi01176: Nitrogen regulatory protein P-II	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	* Oceanobacillus iheyensis HTE831 Site: position = -113 score = 4.55378 sequence = AATTTTCTAAAAACA Gene: OB1212: Nitrogen regulatory protein P-II	Paenibacillus sp. JDR-2	Nitrogen regulatory protein P-II
amt	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi01175: Ammonium transporter	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831 Gene: OB1211: Ammonium transporter	Paenibacillus sp. JDR-2	Ammonium transporter

CRON 71.
yjcL	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -29 score = 4.74345 sequence = AATTTTCTAACAATA Gene: BSU11900: Putative integral membrane protein	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	* Bacillus licheniformis DSM 13 Site: position = -47 score = 4.91722 sequence = AATTATCAGATAATT Gene: BLi01291: Putative integral membrane protein	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Putative integral membrane protein

CRON 72.
yjnA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -84 score = 4.65231 sequence = AAAATTCAAAAAATT Gene: BSU12400: Putative integral membrane protein	* Bacillus amyloliquefaciens FZB42 Site: position = -84 score = 4.97781 sequence = AATTTTCCGAAAATT Gene: RBAM_012430: Putative integral membrane protein	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Putative integral membrane protein

CRON 73.
glnR	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU17450: Transcriptional regulator of nitrogen excess response, MerR family	* Bacillus amyloliquefaciens FZB42 Site: position = -100 score = 4.68972 sequence = AATTTTCAAAGAATT Gene: RBAM_017250: Transcriptional regulator of nitrogen excess response, MerR family	Bacillus pumilus SAFR-032 Gene: BPUM_1636: Transcriptional regulator of nitrogen excess response, MerR family	Bacillus licheniformis DSM 13 Gene: BLi01992: Transcriptional regulator of nitrogen excess response, MerR family	* Anoxybacillus flavithermus WK1 Site: position = -100 score = 4.91345 sequence = AATTTTCAGAAAAAA Gene: Aflv_1508: Transcriptional regulator of nitrogen excess response, MerR family	Geobacillus kaustophilus HTA426 Gene: GK1326: Transcriptional regulator of nitrogen excess response, MerR family	Bacillus cereus ATCC 14579 Gene: BC3706: Transcriptional regulator of nitrogen excess response, MerR family	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831 Gene: OB1650: Transcriptional regulator of nitrogen excess response, MerR family	Paenibacillus sp. JDR-2 Gene: Pjdr2_2618: Transcriptional regulator of nitrogen excess response, MerR family	Transcriptional regulator of nitrogen excess response, MerR family
glnA	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU17460: Glutamine synthetase type I (EC 6.3.1.2)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_017260: Glutamine synthetase type I (EC 6.3.1.2)	Bacillus pumilus SAFR-032 Gene: BPUM_1637: Glutamine synthetase type I (EC 6.3.1.2)	Bacillus licheniformis DSM 13 Gene: BLi01993: Glutamine synthetase type I (EC 6.3.1.2)	Anoxybacillus flavithermus WK1 Gene: Aflv_1507: Glutamine synthetase type I (EC 6.3.1.2)	Geobacillus kaustophilus HTA426 Gene: GK1327: Glutamine synthetase type I (EC 6.3.1.2)	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH2360: Glutamine synthetase type I (EC 6.3.1.2)	Bacillus clausii KSM-K16 Gene: ABC2179: Glutamine synthetase type I (EC 6.3.1.2)	Oceanobacillus iheyensis HTE831 Gene: OB1651: Glutamine synthetase type I (EC 6.3.1.2)	Paenibacillus sp. JDR-2 Gene: Pjdr2_2619: Glutamine synthetase type I (EC 6.3.1.2)	Glutamine synthetase type I (EC 6.3.1.2)

CRON 74.
amhX	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -116 score = 4.29843 sequence = ATTATTCTGAATAGT Gene: BSU03010: Amidohydrolase amhX (EC 3.5.1.-)	* Bacillus amyloliquefaciens FZB42 Site: position = -104 score = 4.56681 sequence = ACTATTCAGAAAATA Gene: RBAM_003250: Amidohydrolase amhX (EC 3.5.1.-)	* Bacillus pumilus SAFR-032 Site: position = -116 score = 4.98081 sequence = AATTTTCAGAATAAT Gene: BPUM_0275: Amidohydrolase amhX (EC 3.5.1.-)	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK0924: Amidohydrolase amhX (EC 3.5.1.-)	* Bacillus cereus ATCC 14579 Site: position = -95 score = 4.56826 sequence = TTTTTTCTTAAAATT Gene: BC0374: Amidohydrolase amhX (EC 3.5.1.-)	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831 Gene: OB2709: Amidohydrolase amhX (EC 3.5.1.-)	Paenibacillus sp. JDR-2	Amidohydrolase amhX (EC 3.5.1.-)

CRON 75.
azlC	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42 Gene: RBAM_026770: Branched-chain amino acid permease (azaleucine resistance)	Bacillus pumilus SAFR-032 Gene: BPUM_0499: Branched-chain amino acid permease (azaleucine resistance)	Bacillus licheniformis DSM 13 Gene: BLi01106: Branched-chain amino acid permease (azaleucine resistance)	* Anoxybacillus flavithermus WK1 Site: position = -29 score = 4.90401 sequence = AATTTTATGAAAATA Gene: Aflv_2051: Branched-chain amino acid permease (azaleucine resistance)	* Geobacillus kaustophilus HTA426 Site: position = -51 score = 4.74345 sequence = AATTTTTAGACAATA Gene: GK0673: Branched-chain amino acid permease (azaleucine resistance)	Bacillus cereus ATCC 14579 Gene: BC1674: Branched-chain amino acid permease (azaleucine resistance)	Bacillus halodurans C-125 Gene: BH2910: Branched-chain amino acid permease (azaleucine resistance)	Bacillus clausii KSM-K16 Gene: ABC3935: Branched-chain amino acid permease (azaleucine resistance)	Oceanobacillus iheyensis HTE831 Gene: OB1119: Branched-chain amino acid permease (azaleucine resistance)	Paenibacillus sp. JDR-2 Gene: Pjdr2_2952: Branched-chain amino acid permease (azaleucine resistance)	Branched-chain amino acid permease (azaleucine resistance)
azlD	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42 Gene: RBAM_026780: Branched-chain amino acid transport protein	Bacillus pumilus SAFR-032 Gene: BPUM_0498: Branched-chain amino acid transport protein	Bacillus licheniformis DSM 13 Gene: BLi01107: Branched-chain amino acid transport protein	2 Anoxybacillus flavithermus WK1 Gene: Aflv_2052: Branched-chain amino acid transport protein Gene: Aflv_0264: Branched-chain amino acid transport protein	Geobacillus kaustophilus HTA426 Gene: GK0674: Branched-chain amino acid transport protein	Bacillus cereus ATCC 14579 Gene: BC1675: Branched-chain amino acid transport protein	Bacillus halodurans C-125 Gene: BH2911: Branched-chain amino acid transport protein	2 Bacillus clausii KSM-K16 Gene: ABC3934: Branched-chain amino acid transport protein Gene: ABC3302: Branched-chain amino acid transport protein	Oceanobacillus iheyensis HTE831 Gene: OB1120: Branched-chain amino acid transport protein	Paenibacillus sp. JDR-2 Gene: Pjdr2_2953: Branched-chain amino acid transport protein	Branched-chain amino acid transport protein

CRON 76.
pta	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU37660: Phosphate acetyltransferase (EC 2.3.1.8)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_034850: Phosphate acetyltransferase (EC 2.3.1.8)	Bacillus pumilus SAFR-032 Gene: BPUM_3415: Phosphate acetyltransferase (EC 2.3.1.8)	Bacillus licheniformis DSM 13 Gene: BLi03997: Phosphate acetyltransferase (EC 2.3.1.8)	Anoxybacillus flavithermus WK1 Gene: Aflv_2760: Phosphate acetyltransferase (EC 2.3.1.8)	Geobacillus kaustophilus HTA426 Gene: GK3415: Phosphate acetyltransferase (EC 2.3.1.8)	* Bacillus cereus ATCC 14579 Site: position = -124 score = 4.90401 sequence = AATTTTATGAAAATA Gene: BC5387: Phosphate acetyltransferase (EC 2.3.1.8)	* Bacillus halodurans C-125 Site: position = -114 score = 4.6226 sequence = AATTTTATAAAAAAT Gene: BH3823: Phosphate acetyltransferase (EC 2.3.1.8)	Bacillus clausii KSM-K16 Gene: ABC3910: Phosphate acetyltransferase (EC 2.3.1.8)	Oceanobacillus iheyensis HTE831 Gene: OB3022: Phosphate acetyltransferase (EC 2.3.1.8)	Paenibacillus sp. JDR-2	Phosphate acetyltransferase (EC 2.3.1.8)

CRON 77.
appD	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	* Anoxybacillus flavithermus WK1 Site: position = -26 score = 4.48071 sequence = TATTTTTTTAATATT Site: position = -48 score = 4.65231 sequence = AATTTTTTGAATTTT Gene: Aflv_0356: Oligopeptide transport ATP-binding protein (TC 3.A.1.5.1)	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH3646: Oligopeptide transport ATP-binding protein (TC 3.A.1.5.1)	Bacillus clausii KSM-K16 Gene: ABC1238: Oligopeptide transport ATP-binding protein (TC 3.A.1.5.1)	* Oceanobacillus iheyensis HTE831 Site: position = -58 score = 4.84058 sequence = AATTTTCAGTATATT Gene: OB2453: Oligopeptide transport ATP-binding protein (TC 3.A.1.5.1)	Paenibacillus sp. JDR-2	Oligopeptide transport ATP-binding protein (TC 3.A.1.5.1)
appF	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1 Gene: Aflv_0357: Oligopeptide transport ATP-binding protein (TC 3.A.1.5.1)	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH3645: Oligopeptide transport ATP-binding protein (TC 3.A.1.5.1)	Bacillus clausii KSM-K16 Gene: ABC1239: Oligopeptide transport ATP-binding protein (TC 3.A.1.5.1)	Oceanobacillus iheyensis HTE831 Gene: OB2452: Oligopeptide transport ATP-binding protein (TC 3.A.1.5.1)	Paenibacillus sp. JDR-2	Oligopeptide transport ATP-binding protein (TC 3.A.1.5.1)
appA	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032 Gene: BPUM_0821: Oligopeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	Bacillus licheniformis DSM 13 Gene: BLi00894: Oligopeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	Anoxybacillus flavithermus WK1 Gene: Aflv_0358: Oligopeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH3644: Oligopeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	Bacillus clausii KSM-K16 Gene: ABC1240: Oligopeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	Oceanobacillus iheyensis HTE831 Gene: OB2451: Oligopeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)	Paenibacillus sp. JDR-2	Oligopeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
appB	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032 Gene: BPUM_0822: Oligopeptide transport system permease protein (TC 3.A.1.5.2)	Bacillus licheniformis DSM 13 Gene: BLi00895: Oligopeptide transport system permease protein (TC 3.A.1.5.2)	Anoxybacillus flavithermus WK1 Gene: Aflv_0359: Oligopeptide transport system permease protein (TC 3.A.1.5.2)	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH3643: Oligopeptide transport system permease protein (TC 3.A.1.5.2)	2 Bacillus clausii KSM-K16 Gene: ABC0565: Oligopeptide transport system permease protein (TC 3.A.1.5.2) Gene: ABC1241: Oligopeptide transport system permease protein (TC 3.A.1.5.2)	Oceanobacillus iheyensis HTE831 Gene: OB2450: Oligopeptide transport system permease protein (TC 3.A.1.5.2)	Paenibacillus sp. JDR-2	Oligopeptide transport system permease protein (TC 3.A.1.5.2)
appC	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032 Gene: BPUM_0823: Oligopeptide transport system permease protein (TC 3.A.1.5.2)	Bacillus licheniformis DSM 13 Gene: BLi00896: Oligopeptide transport system permease protein (TC 3.A.1.5.2)	Anoxybacillus flavithermus WK1 Gene: Aflv_0360: Oligopeptide transport system permease protein (TC 3.A.1.5.2)	Geobacillus kaustophilus HTA426 Gene: GK0469: Oligopeptide transport system permease protein (TC 3.A.1.5.2)	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH3642: Oligopeptide transport system permease protein (TC 3.A.1.5.2)	Bacillus clausii KSM-K16 Gene: ABC1242: Oligopeptide transport system permease protein (TC 3.A.1.5.2)	Oceanobacillus iheyensis HTE831 Gene: OB2449: Oligopeptide transport system permease protein (TC 3.A.1.5.2)	Paenibacillus sp. JDR-2 Gene: Pjdr2_5220: Oligopeptide transport system permease protein (TC 3.A.1.5.2)	Oligopeptide transport system permease protein (TC 3.A.1.5.2)

CRON 78.
nasD	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -121 score = 4.84076 sequence = ATTTTTCATAAAATT Gene: BSU03300: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)	* Bacillus amyloliquefaciens FZB42 Site: position = -109 score = 4.35007 sequence = AATTTTTAGATTTTT Gene: RBAM_003510: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)	Bacillus pumilus SAFR-032 Gene: BPUM_1811: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)	2 Bacillus licheniformis DSM 13 Gene: BLi00482: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) Gene: BLi00484: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1868: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)	Bacillus cereus ATCC 14579 Gene: BC2136: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)	Bacillus halodurans C-125 Gene: BH0613: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)	2 Bacillus clausii KSM-K16 Gene: ABC1621: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) Gene: ABC1623: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_5917: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)	Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
nasE	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU03290: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_003500: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)	Bacillus pumilus SAFR-032 Gene: BPUM_1810: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)	Bacillus licheniformis DSM 13 Gene: BLi00485: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1867: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)	Bacillus cereus ATCC 14579 Gene: BC2135: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)	Bacillus halodurans C-125 Gene: BH0614: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)	Bacillus clausii KSM-K16 Gene: ABC1622: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_5916: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)	Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
nasF	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU03280: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_003490: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi00486: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC2134: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)

CRON 79.
frlB	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -100 score = 4.80311 sequence = AAATTTCAGAAAATA Gene: BSU32610: Fructoselysine 6-phosphate deglycase (EC 3.5.-.-)	* Bacillus amyloliquefaciens FZB42 Site: position = -103 score = 4.80311 sequence = AAATTTCAGAAAATA Gene: RBAM_029670: Fructoselysine 6-phosphate deglycase (EC 3.5.-.-)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Fructoselysine 6-phosphate deglycase (EC 3.5.-.-)
frlO	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU32600: Putative fructoselysine ABC transporter, periplasmic ligand binding protein	Bacillus amyloliquefaciens FZB42 Gene: RBAM_029660: Putative fructoselysine ABC transporter, periplasmic ligand binding protein	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Putative fructoselysine ABC transporter, periplasmic ligand binding protein
yurN	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU32590: Putative fructoselysine ABC transporter, permease	Bacillus amyloliquefaciens FZB42 Gene: RBAM_029650: Putative fructoselysine ABC transporter, permease	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Putative fructoselysine ABC transporter, permease
yurM	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU32580: Putative fructoselysine ABC transporter, permease	Bacillus amyloliquefaciens FZB42 Gene: RBAM_029640: Putative fructoselysine ABC transporter, permease	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Putative fructoselysine ABC transporter, permease
frlD	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU32570: Fructoselysine kinase	Bacillus amyloliquefaciens FZB42 Gene: RBAM_029630: Fructoselysine kinase	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Fructoselysine kinase

CRON 80.
gamR	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -115 score = 4.80311 sequence = TAATTTCTGAAAATT Gene: BSU02370: Predicted transcriptional regulator of glucosamine utilization, GntR family	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi00336: Predicted transcriptional regulator of glucosamine utilization, GntR family	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH0914: Predicted transcriptional regulator of glucosamine utilization, GntR family	* Bacillus clausii KSM-K16 Site: position = -208 score = 4.48714 sequence = AATTTTCGAAAAATA Gene: ABC0645: Predicted transcriptional regulator of glucosamine utilization, GntR family	Oceanobacillus iheyensis HTE831 Gene: OB2272: Predicted transcriptional regulator of glucosamine utilization, GntR family	Paenibacillus sp. JDR-2	Predicted transcriptional regulator of glucosamine utilization, GntR family

CRON 81.
hutP	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -25 score = 4.09099 sequence = AGTTATCAGAATTTT Gene: BSU39340: Hut operon positive regulatory protein	* Bacillus amyloliquefaciens FZB42 Site: position = -36 score = 4.53707 sequence = AGTTATCAGAATATT Gene: RBAM_036400: Hut operon positive regulatory protein	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK0384: Hut operon positive regulatory protein	* Bacillus cereus ATCC 14579 Site: position = -36 score = 4.79615 sequence = AATATTCAAATAATT Gene: BC3653: Hut operon positive regulatory protein	Bacillus halodurans C-125 Gene: BH1981: Hut operon positive regulatory protein	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Hut operon positive regulatory protein
hutH	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU39350: Histidine ammonia-lyase (EC 4.3.1.3)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_036410: Histidine ammonia-lyase (EC 4.3.1.3)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK0385: Histidine ammonia-lyase (EC 4.3.1.3)	Bacillus cereus ATCC 14579 Gene: BC3652: Histidine ammonia-lyase (EC 4.3.1.3)	Bacillus halodurans C-125 Gene: BH1982: Histidine ammonia-lyase (EC 4.3.1.3)	Bacillus clausii KSM-K16 Gene: ABC3933: Histidine ammonia-lyase (EC 4.3.1.3)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Histidine ammonia-lyase (EC 4.3.1.3)
hutU	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU39360: Urocanate hydratase (EC 4.2.1.49)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_036420: Urocanate hydratase (EC 4.2.1.49)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	* Geobacillus kaustophilus HTA426 Site: position = -102 score = 4.31656 sequence = AAAATTCAAAAAAAT Gene: GK1367: Urocanate hydratase (EC 4.2.1.49)	Bacillus cereus ATCC 14579 Gene: BC3651: Urocanate hydratase (EC 4.2.1.49)	Bacillus halodurans C-125 Gene: BH1983: Urocanate hydratase (EC 4.2.1.49)	Bacillus clausii KSM-K16 Gene: ABC3330: Urocanate hydratase (EC 4.2.1.49)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Urocanate hydratase (EC 4.2.1.49)
hutI	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU39370: Imidazolonepropionase (EC 3.5.2.7)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_036430: Imidazolonepropionase (EC 3.5.2.7)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1368: Imidazolonepropionase (EC 3.5.2.7)	Bacillus cereus ATCC 14579 Gene: BC3650: Imidazolonepropionase (EC 3.5.2.7)	Bacillus halodurans C-125 Gene: BH1984: Imidazolonepropionase (EC 3.5.2.7)	Bacillus clausii KSM-K16 Gene: ABC3329: Imidazolonepropionase (EC 3.5.2.7)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Imidazolonepropionase (EC 3.5.2.7)
hutG	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU39380: Formiminoglutamase (EC 3.5.3.8)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_036440: Formiminoglutamase (EC 3.5.3.8)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1365: Formiminoglutamase (EC 3.5.3.8)	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH1985: Formiminoglutamase (EC 3.5.3.8)	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Formiminoglutamase (EC 3.5.3.8)
hutM	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU39390: Histidine permease	Bacillus amyloliquefaciens FZB42 Gene: RBAM_036450: Histidine permease	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH1986: Histidine permease	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Histidine permease
GK1369	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1369: Predicted histidine uptake transporter	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC3326: Predicted histidine uptake transporter	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Predicted histidine uptake transporter

CRON 82.
pelB	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032 Gene: BPUM_3515: Pectate lyase precursor (EC 4.2.2.2)	* Bacillus licheniformis DSM 13 Site: position = -151 score = 4.69324 sequence = ATTATTCAGACAATT Gene: BLi04129: Pectate lyase precursor (EC 4.2.2.2)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	* Bacillus halodurans C-125 Site: position = -174 score = 4.75321 sequence = AATATTTATAAAATT Site: position = -183 score = 4.49374 sequence = TATATTCATAATATT Gene: BH3819: Pectate lyase precursor (EC 4.2.2.2)	Bacillus clausii KSM-K16 Gene: ABC0063: Pectate lyase precursor (EC 4.2.2.2)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Pectate lyase precursor (EC 4.2.2.2)

CRON 83.
ywcB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU38230: Hypothetical Membrane Spanning Protein	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032 Gene: BPUM_3478: Hypothetical Membrane Spanning Protein	Bacillus licheniformis DSM 13 Gene: BLi04045: Hypothetical Membrane Spanning Protein	Anoxybacillus flavithermus WK1	* Geobacillus kaustophilus HTA426 Site: position = -130 score = 4.54796 sequence = ATTTTTCAGATAAAT Gene: GK0929: Hypothetical Membrane Spanning Protein	* Bacillus cereus ATCC 14579 Site: position = -71 score = 4.75321 sequence = AATATTTATAAAATT Site: position = -80 score = 4.6566 sequence = AAGTTTCTGAATATT Gene: BC1608: Hypothetical Membrane Spanning Protein	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC2686: Hypothetical Membrane Spanning Protein	Oceanobacillus iheyensis HTE831 Gene: OB2443: Hypothetical Membrane Spanning Protein	Paenibacillus sp. JDR-2	Hypothetical Membrane Spanning Protein
ywcA	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU38240: SSS family solute:sodium (Na+) symporter	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032 Gene: BPUM_3479: SSS family solute:sodium (Na+) symporter	Bacillus licheniformis DSM 13 Gene: BLi04046: SSS family solute:sodium (Na+) symporter	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK0928: SSS family solute:sodium (Na+) symporter	Bacillus cereus ATCC 14579 Gene: BC1609: SSS family solute:sodium (Na+) symporter	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC2685: SSS family solute:sodium (Na+) symporter	Oceanobacillus iheyensis HTE831 Gene: OB2442: SSS family solute:sodium (Na+) symporter	Paenibacillus sp. JDR-2	SSS family solute:sodium (Na+) symporter

CRON 84.
oppA2	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	* Bacillus halodurans C-125 Site: position = -295 score = 4.47507 sequence = AATATTTTGACAAAT Gene: BH0031: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	Bacillus clausii KSM-K16 Gene: ABC0033: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	3 Oceanobacillus iheyensis HTE831* Site: position = -86 score = 4.47711 sequence = ATTTTTTAAAAAATA Site: position = -87 score = 4.74961 sequence = AATTTTTTAAAAAAT Site: position = -186 score = 4.77267 sequence = AATTTTCGGAATATT Gene: OB3071: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) Site: position = -122 score = 4.41296 sequence = AATTGAAAGAAAATT Gene: OB0463: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) Gene: OB0773: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	Paenibacillus sp. JDR-2	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)

CRON 85.
serC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU10020: Phosphoserine aminotransferase (EC 2.6.1.52)	* Bacillus amyloliquefaciens FZB42 Site: position = -75 score = 4.35007 sequence = AAAAATCAAAAAATT Gene: RBAM_010260: Phosphoserine aminotransferase (EC 2.6.1.52)	Bacillus pumilus SAFR-032 Gene: BPUM_0948: Phosphoserine aminotransferase (EC 2.6.1.52)	Bacillus licheniformis DSM 13 Gene: BLi01082: Phosphoserine aminotransferase (EC 2.6.1.52)	* Anoxybacillus flavithermus WK1 Site: position = -90 score = 4.74961 sequence = ATTTTTTAAAAAATT Site: position = -91 score = 4.47711 sequence = TATTTTTTAAAAAAT Gene: Aflv_2293: Phosphoserine aminotransferase (EC 2.6.1.52)	2 Geobacillus kaustophilus HTA426 Gene: GK0649: Phosphoserine aminotransferase (EC 2.6.1.52) Gene: GK2050: Phosphoserine aminotransferase (EC 2.6.1.52)	Bacillus cereus ATCC 14579 Gene: BC3249: Phosphoserine aminotransferase (EC 2.6.1.52)	Bacillus halodurans C-125 Gene: BH1188: Phosphoserine aminotransferase (EC 2.6.1.52)	Bacillus clausii KSM-K16 Gene: ABC1531: Phosphoserine aminotransferase (EC 2.6.1.52)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_4776: Phosphoserine aminotransferase (EC 2.6.1.52)	Phosphoserine aminotransferase (EC 2.6.1.52)

CRON 86.
alaR	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU31410: Transcriptional regulator of alanine metabolism, Lrp/AsnC family	Bacillus amyloliquefaciens FZB42 Gene: RBAM_028510: Transcriptional regulator of alanine metabolism, Lrp/AsnC family	Bacillus pumilus SAFR-032 Gene: BPUM_2808: Transcriptional regulator of alanine metabolism, Lrp/AsnC family	* Bacillus licheniformis DSM 13 Site: position = -44 score = 4.76303 sequence = AATATTCAGAAGATT Gene: BLi03321: Transcriptional regulator of alanine metabolism, Lrp/AsnC family	* Anoxybacillus flavithermus WK1 Site: position = -32 score = 4.6961 sequence = AATTGTGTGAAAATT Gene: Aflv_2391: Transcriptional regulator of alanine metabolism, Lrp/AsnC family	Geobacillus kaustophilus HTA426 Gene: GK2929: Transcriptional regulator of alanine metabolism, Lrp/AsnC family	Bacillus cereus ATCC 14579 Gene: BC4902: Transcriptional regulator of alanine metabolism, Lrp/AsnC family	Bacillus halodurans C-125 Gene: BH3351: Transcriptional regulator of alanine metabolism, Lrp/AsnC family	Bacillus clausii KSM-K16 Gene: ABC2914: Transcriptional regulator of alanine metabolism, Lrp/AsnC family	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_1403: Transcriptional regulator of alanine metabolism, Lrp/AsnC family	Transcriptional regulator of alanine metabolism, Lrp/AsnC family
alaT	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU31400: Aspartate aminotransferase (EC 2.6.1.1)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_028500: Aspartate aminotransferase (EC 2.6.1.1)	Bacillus pumilus SAFR-032 Gene: BPUM_2807: Aspartate aminotransferase (EC 2.6.1.1)	Bacillus licheniformis DSM 13 Gene: BLi03320: Aspartate aminotransferase (EC 2.6.1.1)	Anoxybacillus flavithermus WK1 Gene: Aflv_2390: Aspartate aminotransferase (EC 2.6.1.1)	Geobacillus kaustophilus HTA426 Gene: GK2928: Aspartate aminotransferase (EC 2.6.1.1)	Bacillus cereus ATCC 14579 Gene: BC4901: Aspartate aminotransferase (EC 2.6.1.1)	Bacillus halodurans C-125 Gene: BH3350: Aspartate aminotransferase (EC 2.6.1.1)	Bacillus clausii KSM-K16 Gene: ABC2913: Aspartate aminotransferase (EC 2.6.1.1)	Oceanobacillus iheyensis HTE831	2 Paenibacillus sp. JDR-2 Gene: Pjdr2_5374: Aspartate aminotransferase (EC 2.6.1.1) Gene: Pjdr2_1404: Aspartate aminotransferase (EC 2.6.1.1)	Aspartate aminotransferase (EC 2.6.1.1)

CRON 87.
yuaE	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -86 score = 4.55319 sequence = AATTTTAAGACAAAT Gene: BSU31030: Hypothetical protein	* Bacillus amyloliquefaciens FZB42 Site: position = -77 score = 4.74221 sequence = AATTTTCTGATAAGT Gene: RBAM_028130: Hypothetical protein	Bacillus pumilus SAFR-032 Gene: BPUM_2733: Hypothetical protein	Bacillus licheniformis DSM 13 Gene: BLi03267: Hypothetical protein	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Hypothetical protein

CRON 88.
yuaF	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -96 score = 4.55319 sequence = ATTTGTCTTAAAATT Gene: BSU31020: Hypothetical membrane protein	* Bacillus amyloliquefaciens FZB42 Site: position = -84 score = 4.74221 sequence = ACTTATCAGAAAATT Gene: RBAM_028120: Hypothetical membrane protein	Bacillus pumilus SAFR-032 Gene: BPUM_2732: Hypothetical membrane protein	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK0339: Hypothetical membrane protein	Bacillus cereus ATCC 14579 Gene: BC0557: Hypothetical membrane protein	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC3948: Hypothetical membrane protein	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_3793: Hypothetical membrane protein	Hypothetical membrane protein
yuaG	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU31010: Uncharacterized protein YuaG	Bacillus amyloliquefaciens FZB42 Gene: RBAM_028110: Uncharacterized protein YuaG	Bacillus pumilus SAFR-032 Gene: BPUM_2731: Uncharacterized protein YuaG	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK0340: Uncharacterized protein YuaG	Bacillus cereus ATCC 14579 Gene: BC0558: Uncharacterized protein YuaG	Bacillus halodurans C-125 Gene: BH3500: Uncharacterized protein YuaG	Bacillus clausii KSM-K16 Gene: ABC3949: Uncharacterized protein YuaG	Oceanobacillus iheyensis HTE831 Gene: OB0205: Uncharacterized protein YuaG	Paenibacillus sp. JDR-2 Gene: Pjdr2_3792: Uncharacterized protein YuaG	Uncharacterized protein YuaG

CRON 89.
yfmB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU07530: Hypothetical protein	Bacillus amyloliquefaciens FZB42 Gene: RBAM_007700: Hypothetical protein	* Bacillus pumilus SAFR-032 Site: position = -80 score = 4.73987 sequence = AATTTTCTGAAATAT Gene: BPUM_0697: Hypothetical protein	* Bacillus licheniformis DSM 13 Site: position = -83 score = 4.62587 sequence = AATTTTCAGACAAAA Gene: BLi00778: Hypothetical protein	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Hypothetical protein

CRON 90.
glpQ	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	* Bacillus licheniformis DSM 13 Site: position = -91 score = 4.73043 sequence = AAATTTATGAAAATT Gene: BLi04156: Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH3700: Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46)	Bacillus clausii KSM-K16	* Oceanobacillus iheyensis HTE831 Site: position = -40 score = 4.4954 sequence = AATATAATGAAAATT Gene: OB2833: Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46)	Paenibacillus sp. JDR-2	Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46)

CRON 91.
amyS	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	* Bacillus licheniformis DSM 13 Site: position = -57 score = 4.66534 sequence = AAAATTCTGAATATT Gene: BLi00656: Cytoplasmic alpha-amylase (EC 3.2.1.1)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	* Bacillus cereus ATCC 14579 Site: position = -60 score = 4.45097 sequence = AATATTATAATAATT Gene: BC3482: Cytoplasmic alpha-amylase (EC 3.2.1.1)	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Cytoplasmic alpha-amylase (EC 3.2.1.1)

CRON 92.
cotR	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -218 score = 4.68021 sequence = ATTTTTCAAACAATT Gene: BSU34530: Putative sporulation hydrolase (EC=3.1.1.-)	* Bacillus amyloliquefaciens FZB42 Site: position = -185 score = 4.51062 sequence = TATTTTTAAATAATT Gene: RBAM_005540: Putative sporulation hydrolase (EC=3.1.1.-)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Putative sporulation hydrolase (EC=3.1.1.-)

CRON 93.
ispA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -147 score = 4.54486 sequence = AATATTTTGAAGATT Gene: BSU13190: S8 family serine protease precursor (EC 3.4.21.-)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_013050: S8 family serine protease precursor (EC 3.4.21.-)	Bacillus pumilus SAFR-032 Gene: BPUM_1217: S8 family serine protease precursor (EC 3.4.21.-)	* Bacillus licheniformis DSM 13 Site: position = -114 score = 4.69927 sequence = ACTTTTCATAAAATT Gene: BLi01423: S8 family serine protease precursor (EC 3.4.21.-)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	S8 family serine protease precursor (EC 3.4.21.-)

CRON 94.
yqjP	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU23790: Zinc metallohydrolase, metallo-beta-lactamase family (EC 3.5.2.6)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_021920: Zinc metallohydrolase, metallo-beta-lactamase family (EC 3.5.2.6)	Bacillus pumilus SAFR-032 Gene: BPUM_2108: Zinc metallohydrolase, metallo-beta-lactamase family (EC 3.5.2.6)	Bacillus licheniformis DSM 13 Gene: BLi02548: Zinc metallohydrolase, metallo-beta-lactamase family (EC 3.5.2.6)	* Anoxybacillus flavithermus WK1 Site: position = -108 score = 4.44737 sequence = AATTTTTTAATAAAT Site: position = -117 score = 4.59798 sequence = TATTTTCTGAATTTT Gene: Aflv_0983: Zinc metallohydrolase, metallo-beta-lactamase family (EC 3.5.2.6)	Geobacillus kaustophilus HTA426 Gene: GK2330: Zinc metallohydrolase, metallo-beta-lactamase family (EC 3.5.2.6)	* Bacillus cereus ATCC 14579 Site: position = -90 score = 4.3387 sequence = TTTTATCTGAAAATA Gene: BC4133: Zinc metallohydrolase, metallo-beta-lactamase family (EC 3.5.2.6)	Bacillus halodurans C-125 Gene: BH0882: Zinc metallohydrolase, metallo-beta-lactamase family (EC 3.5.2.6)	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Zinc metallohydrolase, metallo-beta-lactamase family (EC 3.5.2.6)

CRON 95.
yusZ	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -83 score = 4.39827 sequence = TATTGTATAAAAATT Gene: BSU32980: Oxidoreductase, short-chain dehydrogenase/reductase (EC 1.1.1.-)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_030090: Oxidoreductase, short-chain dehydrogenase/reductase (EC 1.1.1.-)	Bacillus pumilus SAFR-032 Gene: BPUM_2951: Oxidoreductase, short-chain dehydrogenase/reductase (EC 1.1.1.-)	* Bacillus licheniformis DSM 13 Site: position = -111 score = 4.6226 sequence = AATTTTTATAAAAAT Gene: BLi03479: Oxidoreductase, short-chain dehydrogenase/reductase (EC 1.1.1.-)	Anoxybacillus flavithermus WK1 Gene: Aflv_1418: Oxidoreductase, short-chain dehydrogenase/reductase (EC 1.1.1.-)	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC2781: Oxidoreductase, short-chain dehydrogenase/reductase (EC 1.1.1.-)	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Oxidoreductase, short-chain dehydrogenase/reductase (EC 1.1.1.-)

CRON 96.
gltA	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU18450: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_018620: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	Bacillus pumilus SAFR-032 Gene: BPUM_1814: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	Bacillus licheniformis DSM 13 Gene: BLi02162: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	Anoxybacillus flavithermus WK1 Gene: Aflv_1235: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	Geobacillus kaustophilus HTA426 Gene: GK1431: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	Bacillus cereus ATCC 14579	* Bacillus halodurans C-125 Site: position = -94 score = 4.45229 sequence = AAATGTCAGAAAAAT Gene: BH1728: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	Bacillus clausii KSM-K16 Gene: ABC2035: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	* Oceanobacillus iheyensis HTE831 Site: position = -202 score = 4.58494 sequence = AAATTTCAAAAAATA Gene: OB3099: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	Paenibacillus sp. JDR-2	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
gltB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU18440: Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_018610: Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	Bacillus pumilus SAFR-032 Gene: BPUM_1813: Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	Bacillus licheniformis DSM 13 Gene: BLi02161: Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	Anoxybacillus flavithermus WK1 Gene: Aflv_1236: Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	Geobacillus kaustophilus HTA426 Gene: GK1432: Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH1729: Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	Bacillus clausii KSM-K16 Gene: ABC2034: Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	Oceanobacillus iheyensis HTE831 Gene: OB3098: Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	Paenibacillus sp. JDR-2 Gene: Pjdr2_2657: Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)

CRON 97.
yhjC	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -159 score = 4.51554 sequence = TAATTTCAGACAATT Gene: BSU10460: Hypothetical protein	* Bacillus amyloliquefaciens FZB42 Site: position = -85 score = 4.58291 sequence = AAATTTCAGACTATT Gene: RBAM_010680: Hypothetical protein	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Hypothetical protein
yhjB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU10450: Na+/solute symporter	Bacillus amyloliquefaciens FZB42 Gene: RBAM_010670: Na+/solute symporter	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK3240: Na+/solute symporter	Bacillus cereus ATCC 14579 Gene: BC0703: Na+/solute symporter	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Na+/solute symporter

CRON 98.
rok	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -134 score = 4.61226 sequence = CATTTTCAGAAAATA Gene: BSU14240: ComK repressor	* Bacillus amyloliquefaciens FZB42 Site: position = -133 score = 4.61226 sequence = CATTTTCAGAAAATA Gene: RBAM_014000: ComK repressor	Bacillus pumilus SAFR-032 Gene: BPUM_1321: ComK repressor	Bacillus licheniformis DSM 13 Gene: BLi01637: ComK repressor	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	ComK repressor

CRON 99.
adeC	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -118 score = 4.46931 sequence = TATTATCAGAATATA Gene: BSU14520: Adenine deaminase (EC 3.5.4.2)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_014260: Adenine deaminase (EC 3.5.4.2)	Bacillus pumilus SAFR-032 Gene: BPUM_1348: Adenine deaminase (EC 3.5.4.2)	Bacillus licheniformis DSM 13 Gene: BLi01667: Adenine deaminase (EC 3.5.4.2)	* Anoxybacillus flavithermus WK1 Site: position = -122 score = 4.55378 sequence = AATTTTCAAAAAACA Gene: Aflv_0257: Adenine deaminase (EC 3.5.4.2)	Geobacillus kaustophilus HTA426 Gene: GK2098: Adenine deaminase (EC 3.5.4.2)	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Adenine deaminase (EC 3.5.4.2)

CRON 100.
glyP	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032 Gene: BPUM_0735: Sodium/glycine symporter GlyP	* Bacillus licheniformis DSM 13 Site: position = -52 score = 4.55343 sequence = AACTTTCAGAATATT Gene: BLi00817: Sodium/glycine symporter GlyP	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC2317: Sodium/glycine symporter GlyP	* Bacillus halodurans C-125 Site: position = -51 score = 4.52365 sequence = TATTATTTGAATATT Gene: BH4033: Sodium/glycine symporter GlyP	Bacillus clausii KSM-K16 Gene: ABC2131: Sodium/glycine symporter GlyP	Oceanobacillus iheyensis HTE831 Gene: OB0872: Sodium/glycine symporter GlyP	Paenibacillus sp. JDR-2	Sodium/glycine symporter GlyP

CRON 101.
RBAM_038050	Bacillus subtilis subsp. subtilis str. 168	* Bacillus amyloliquefaciens FZB42 Site: position = -39 score = 4.50357 sequence = ACTATTCTGAAAAAT Gene: RBAM_038050: Acetyltransferase, GNAT family protein	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	* Bacillus cereus ATCC 14579 Site: position = -32 score = 4.4954 sequence = AATATTATGTAAATT Gene: BC2923: Acetyltransferase, GNAT family protein	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Acetyltransferase, GNAT family protein

CRON 102.
gltZ	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	* Bacillus licheniformis DSM 13 Site: position = -98 score = 4.45628 sequence = TATTATTTGAAAATA Gene: BLi03198: Proton/glutamate symport protein @ Sodium/glutamate symport protein	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	* Oceanobacillus iheyensis HTE831 Site: position = -49 score = 4.47507 sequence = AATTGTTAGAATAAT Gene: OB2303: Proton/glutamate symport protein @ Sodium/glutamate symport protein	Paenibacillus sp. JDR-2	Proton/glutamate symport protein @ Sodium/glutamate symport protein

CRON 103.
yclF	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU03670: POT family proton (H+)-dependent oligopeptide transporter	Bacillus amyloliquefaciens FZB42 Gene: RBAM_003840: POT family proton (H+)-dependent oligopeptide transporter	* Bacillus pumilus SAFR-032 Site: position = -187 score = 4.48237 sequence = AATTTTAAATAAATT Gene: BPUM_0343: POT family proton (H+)-dependent oligopeptide transporter	Bacillus licheniformis DSM 13 Gene: BLi00449: POT family proton (H+)-dependent oligopeptide transporter	Anoxybacillus flavithermus WK1 Gene: Aflv_2825: POT family proton (H+)-dependent oligopeptide transporter	* Geobacillus kaustophilus HTA426 Site: position = -68 score = 4.4077 sequence = ATTTTTTTGACAATA Site: position = -118 score = 4.36313 sequence = TTTTTTCTTAATATT Gene: GK2020: POT family proton (H+)-dependent oligopeptide transporter	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	POT family proton (H+)-dependent oligopeptide transporter

CRON 104.
pdaB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU01570: Probable polysaccharide deacetylase	Bacillus amyloliquefaciens FZB42 Gene: RBAM_001830: Probable polysaccharide deacetylase	Bacillus pumilus SAFR-032 Gene: BPUM_0148: Probable polysaccharide deacetylase	* Bacillus licheniformis DSM 13 Site: position = -193 score = 4.50643 sequence = ACTTTTCTCAAAATT Gene: BLi00175: Probable polysaccharide deacetylase	* Anoxybacillus flavithermus WK1 Site: position = -92 score = 4.41386 sequence = ATTTTTTAAAAAAAT Gene: Aflv_0145: Probable polysaccharide deacetylase	Geobacillus kaustophilus HTA426 Gene: GK0148: Probable polysaccharide deacetylase	Bacillus cereus ATCC 14579 Gene: BC0171: Probable polysaccharide deacetylase	Bacillus halodurans C-125 Gene: BH0243: Probable polysaccharide deacetylase	Bacillus clausii KSM-K16 Gene: ABC0202: Probable polysaccharide deacetylase	Oceanobacillus iheyensis HTE831 Gene: OB0199: Probable polysaccharide deacetylase	Paenibacillus sp. JDR-2 Gene: Pjdr2_5641: Probable polysaccharide deacetylase	Probable polysaccharide deacetylase

CRON 105.
slp	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -95 score = 4.36853 sequence = AATTATATAACAATT Gene: BSU14620: Peptidoglycan-associated protein	* Bacillus amyloliquefaciens FZB42 Site: position = -115 score = 4.36853 sequence = AATTATATAACAATT Gene: RBAM_014460: Peptidoglycan-associated protein	Bacillus pumilus SAFR-032 Gene: BPUM_1359: Peptidoglycan-associated protein	Bacillus licheniformis DSM 13 Gene: BLi01680: Peptidoglycan-associated protein	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH2646: Peptidoglycan-associated protein	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Peptidoglycan-associated protein

CRON 106.
odhA	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU19370: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_019130: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	Bacillus pumilus SAFR-032 Gene: BPUM_1862: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	Bacillus licheniformis DSM 13 Gene: BLi02260: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1023: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	* Bacillus cereus ATCC 14579 Site: position = -231 score = 4.37422 sequence = ATTTTTCTGTAAAAT Gene: BC1252: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	* Bacillus halodurans C-125 Site: position = -232 score = 4.32547 sequence = TATTTTCAGAATTTA Gene: BH2206: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	Bacillus clausii KSM-K16 Gene: ABC2114: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	Oceanobacillus iheyensis HTE831 Gene: OB1089: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	Paenibacillus sp. JDR-2 Gene: Pjdr2_4724: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
odhB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU19360: 2-oxoglutarate dehydrogenase E2 component	Bacillus amyloliquefaciens FZB42 Gene: RBAM_019120: 2-oxoglutarate dehydrogenase E2 component	Bacillus pumilus SAFR-032 Gene: BPUM_1861: 2-oxoglutarate dehydrogenase E2 component	Bacillus licheniformis DSM 13 Gene: BLi02259: 2-oxoglutarate dehydrogenase E2 component	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1024: 2-oxoglutarate dehydrogenase E2 component	Bacillus cereus ATCC 14579 Gene: BC1251: 2-oxoglutarate dehydrogenase E2 component	Bacillus halodurans C-125 Gene: BH2205: 2-oxoglutarate dehydrogenase E2 component	Bacillus clausii KSM-K16 Gene: ABC2113: 2-oxoglutarate dehydrogenase E2 component	Oceanobacillus iheyensis HTE831 Gene: OB1090: 2-oxoglutarate dehydrogenase E2 component	Paenibacillus sp. JDR-2 Gene: Pjdr2_4725: 2-oxoglutarate dehydrogenase E2 component	2-oxoglutarate dehydrogenase E2 component

CRON 107.
acsA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -78 score = 4.60772 sequence = TATATTTTAAAAATT Gene: BSU29680: Acetyl-coenzyme A synthetase (EC 6.2.1.1)	* Bacillus amyloliquefaciens FZB42 Site: position = -73 score = 4.60772 sequence = TATATTTTAAAAATT Gene: RBAM_026800: Acetyl-coenzyme A synthetase (EC 6.2.1.1)	* Bacillus pumilus SAFR-032 Site: position = -77 score = 4.60811 sequence = AGTTTTTTAAAAATT Gene: BPUM_2616: Acetyl-coenzyme A synthetase (EC 6.2.1.1)	* Bacillus licheniformis DSM 13 Site: position = -74 score = 4.81286 sequence = TATTTTTTAAAAATT Gene: BLi03119: Acetyl-coenzyme A synthetase (EC 6.2.1.1)	* Anoxybacillus flavithermus WK1 Site: position = -77 score = 5.08536 sequence = AATTTTTTAAAAATT Gene: Aflv_0462: Acetyl-coenzyme A synthetase (EC 6.2.1.1)	* Geobacillus kaustophilus HTA426 Site: position = -102 score = 4.3802 sequence = AAATTTCAAAAAAGT Site: position = -77 score = 4.88023 sequence = AATATTTTAAAAATT Gene: GK2806: Acetyl-coenzyme A synthetase (EC 6.2.1.1)	* Bacillus cereus ATCC 14579 Site: position = -69 score = 4.84058 sequence = AATATACTGAAAATT Gene: BC4659: Acetyl-coenzyme A synthetase (EC 6.2.1.1)	Bacillus halodurans C-125 Gene: BH3234: Acetyl-coenzyme A synthetase (EC 6.2.1.1)	Bacillus clausii KSM-K16 Gene: ABC2760: Acetyl-coenzyme A synthetase (EC 6.2.1.1)	Oceanobacillus iheyensis HTE831 Gene: OB0022: Acetyl-coenzyme A synthetase (EC 6.2.1.1)	Paenibacillus sp. JDR-2 Gene: Pjdr2_3796: Acetyl-coenzyme A synthetase (EC 6.2.1.1)	Acetyl-coenzyme A synthetase (EC 6.2.1.1)

CRON 108.
gltT	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU10220: Proton/sodium-glutamate symport protein	Bacillus amyloliquefaciens FZB42 Gene: RBAM_010420: Proton/sodium-glutamate symport protein	* Bacillus pumilus SAFR-032 Site: position = -140 score = 4.4077 sequence = TTTTTTCAAACAATT Site: position = -273 score = 4.5777 sequence = TTTTTTCTGAAAAAT Gene: BPUM_0965: Proton/sodium-glutamate symport protein	* Bacillus licheniformis DSM 13 Site: position = -124 score = 4.62242 sequence = AATTTTCAATATATT Gene: BLi01100: Proton/sodium-glutamate symport protein	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Proton/sodium-glutamate symport protein

CRON 109.
tdh	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU16990: L-threonine 3-dehydrogenase (EC 1.1.1.103)	* Bacillus amyloliquefaciens FZB42 Site: position = -137 score = 4.49014 sequence = AATATTCAAAAAAAA Gene: RBAM_016830: L-threonine 3-dehydrogenase (EC 1.1.1.103)	* Bacillus pumilus SAFR-032 Site: position = -136 score = 4.35953 sequence = TTTTTTTAGAAAAAT Gene: BPUM_1603: L-threonine 3-dehydrogenase (EC 1.1.1.103)	Bacillus licheniformis DSM 13 Gene: BLi01923: L-threonine 3-dehydrogenase (EC 1.1.1.103)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC0622: L-threonine 3-dehydrogenase (EC 1.1.1.103)	Bacillus halodurans C-125 Gene: BH3388: L-threonine 3-dehydrogenase (EC 1.1.1.103)	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831 Gene: OB3053: L-threonine 3-dehydrogenase (EC 1.1.1.103)	Paenibacillus sp. JDR-2	L-threonine 3-dehydrogenase (EC 1.1.1.103)
kbl	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU17000: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_016840: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	Bacillus pumilus SAFR-032 Gene: BPUM_1604: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	Bacillus licheniformis DSM 13 Gene: BLi01924: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC0621: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831 Gene: OB3054: 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)	Paenibacillus sp. JDR-2	2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29)

CRON 110.
opuCA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -42 score = 5.04445 sequence = ACTTTTCAGAAAATT Gene: BSU33830: Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA	* Bacillus amyloliquefaciens FZB42 Site: position = -41 score = 4.7087 sequence = ACTTTTCAGAAAAAT Gene: RBAM_031100: Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA	* Bacillus pumilus SAFR-032 Site: position = -43 score = 5.04406 sequence = AATTTTCTGAATATA Gene: BPUM_3043: Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA	Bacillus licheniformis DSM 13 Gene: BLi03651: Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK0314: Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC3029: Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_1633: Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA	Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA
opuCB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU33820: Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB	Bacillus amyloliquefaciens FZB42 Gene: RBAM_031090: Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB	Bacillus pumilus SAFR-032 Gene: BPUM_3042: Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB	Bacillus licheniformis DSM 13 Gene: BLi03650: Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC3030: Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_1634: Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB	Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB
opuCC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU33810: Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC	Bacillus amyloliquefaciens FZB42 Gene: RBAM_031080: Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC	Bacillus pumilus SAFR-032 Gene: BPUM_3041: Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC	Bacillus licheniformis DSM 13 Gene: BLi03649: Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC3031: Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_1635: Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC	Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC
opuCD	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU33800: Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD	Bacillus amyloliquefaciens FZB42 Gene: RBAM_031070: Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD	Bacillus pumilus SAFR-032 Gene: BPUM_3040: Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD	Bacillus licheniformis DSM 13 Gene: BLi03648: Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC3032: Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_1636: Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD	Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD
opuBA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -65 score = 4.89838 sequence = AATTGTCTGAAAAAT Gene: BSU33730: Choline ABC transport system, ATP-binding protein OpuBA	* Bacillus amyloliquefaciens FZB42 Site: position = -66 score = 4.75688 sequence = AATTGTCTGAAAAGT Gene: RBAM_031050: Choline ABC transport system, ATP-binding protein OpuBA	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Choline ABC transport system, ATP-binding protein OpuBA
opuBB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU33720: Choline ABC transport system, permease protein OpuBB	Bacillus amyloliquefaciens FZB42 Gene: RBAM_031040: Choline ABC transport system, permease protein OpuBB	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Choline ABC transport system, permease protein OpuBB
opuBC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU33710: Choline ABC transport system, choline-binding protein OpuBC	Bacillus amyloliquefaciens FZB42 Gene: RBAM_031030: Choline ABC transport system, choline-binding protein OpuBC	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Choline ABC transport system, choline-binding protein OpuBC
opuBD	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU33700: Choline ABC transport system, permease protein OpuBD	Bacillus amyloliquefaciens FZB42 Gene: RBAM_031020: Choline ABC transport system, permease protein OpuBD	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Choline ABC transport system, permease protein OpuBD

CRON 111.
gltO	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	* Bacillus pumilus SAFR-032 Site: position = -252 score = 5.03103 sequence = AATTTTCTAAAAATA Site: position = -230 score = 4.4113 sequence = AATAGTATGAAAATA Gene: BPUM_0421: Proton/sodium-glutamate symport protein	Bacillus licheniformis DSM 13 Gene: BLi00536: Proton/sodium-glutamate symport protein	* Anoxybacillus flavithermus WK1 Site: position = -140 score = 4.89838 sequence = ATTTTTCTGACAATT Gene: Aflv_1459: Proton/sodium-glutamate symport protein	Geobacillus kaustophilus HTA426	* Bacillus cereus ATCC 14579 Site: position = -88 score = 4.59798 sequence = AAAATTCAGAAAATA Gene: BC1389: Proton/sodium-glutamate symport protein	* Bacillus halodurans C-125 Site: position = -258 score = 4.42277 sequence = TATTTTTTGAAAAAA Gene: BH3820: Proton/sodium-glutamate symport protein	* Bacillus clausii KSM-K16 Site: position = -77 score = 4.27363 sequence = AATTTTTAATAAAAT Gene: ABC3908: Proton/sodium-glutamate symport protein	* Oceanobacillus iheyensis HTE831 Site: position = -36 score = 4.91345 sequence = AATTTTCTGAAAAAA Gene: OB0021: Proton/sodium-glutamate symport protein	Paenibacillus sp. JDR-2	Proton/sodium-glutamate symport protein

CRON 112.
ureA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -890 score = 4.88023 sequence = AATTTTTTAAATATT Gene: BSU36660: Urease gamma subunit (EC 3.5.1.5)	* Bacillus amyloliquefaciens FZB42 Site: position = -251 score = 4.62242 sequence = AATATTCTATAAATT Gene: RBAM_033830: Urease gamma subunit (EC 3.5.1.5)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1932: Urease gamma subunit (EC 3.5.1.5)	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH0252: Urease gamma subunit (EC 3.5.1.5)	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_4328: Urease gamma subunit (EC 3.5.1.5)	Urease gamma subunit (EC 3.5.1.5)
ureB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU36650: Urease beta subunit (EC 3.5.1.5)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_033820: Urease beta subunit (EC 3.5.1.5)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1931: Urease beta subunit (EC 3.5.1.5)	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH0253: Urease beta subunit (EC 3.5.1.5)	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_4327: Urease beta subunit (EC 3.5.1.5)	Urease beta subunit (EC 3.5.1.5)
ureC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU36640: Urease alpha subunit (EC 3.5.1.5)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_033810: Urease alpha subunit (EC 3.5.1.5)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426 Gene: GK1930: Urease alpha subunit (EC 3.5.1.5)	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH0254: Urease alpha subunit (EC 3.5.1.5)	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_4326: Urease alpha subunit (EC 3.5.1.5)	Urease alpha subunit (EC 3.5.1.5)

CRON 113.
ytcI	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU29560: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases	Bacillus amyloliquefaciens FZB42 Gene: RBAM_026490: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases	* Bacillus pumilus SAFR-032 Site: position = -158 score = 4.60568 sequence = AATAGTTTGAATATT Gene: BPUM_2600: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases	Bacillus licheniformis DSM 13 Gene: BLi03098: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases	Anoxybacillus flavithermus WK1 Gene: Aflv_0474: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases	Geobacillus kaustophilus HTA426 Gene: GK2793: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases	* Bacillus cereus ATCC 14579 Site: position = -58 score = 4.74348 sequence = AATTAACTGAAAATT Gene: BC4645: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases	* Bacillus halodurans C-125 Site: position = -65 score = 4.28501 sequence = AATATTCAAAATAAA Gene: BH3201: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases	* Bacillus clausii KSM-K16 Site: position = -175 score = 4.33084 sequence = CTTTTTTAGAAAATT Gene: ABC3255: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases	* Oceanobacillus iheyensis HTE831 Site: position = -96 score = 4.53668 sequence = TATAATCAGAATATT Gene: OB2643: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases	Paenibacillus sp. JDR-2 Gene: Pjdr2_4673: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases	Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases

CRON 114.
ndk	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU22730: Nucleoside diphosphate kinase (EC 2.7.4.6)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_020890: Nucleoside diphosphate kinase (EC 2.7.4.6)	Bacillus pumilus SAFR-032 Gene: BPUM_2004: Nucleoside diphosphate kinase (EC 2.7.4.6)	* Bacillus licheniformis DSM 13 Site: position = -74 score = 4.68021 sequence = AATTGTTTGAAAAAT Gene: BLi02408: Nucleoside diphosphate kinase (EC 2.7.4.6)	Anoxybacillus flavithermus WK1 Gene: Aflv_1096: Nucleoside diphosphate kinase (EC 2.7.4.6)	Geobacillus kaustophilus HTA426 Gene: GK2209: Nucleoside diphosphate kinase (EC 2.7.4.6)	Bacillus cereus ATCC 14579 Gene: BC1515: Nucleoside diphosphate kinase (EC 2.7.4.6)	Bacillus halodurans C-125 Gene: BH1654: Nucleoside diphosphate kinase (EC 2.7.4.6)	Bacillus clausii KSM-K16 Gene: ABC1890: Nucleoside diphosphate kinase (EC 2.7.4.6)	* Oceanobacillus iheyensis HTE831 Site: position = -66 score = 4.84076 sequence = ATTTTTAAGAAAATT Gene: OB1787: Nucleoside diphosphate kinase (EC 2.7.4.6)	3 Paenibacillus sp. JDR-2 Gene: Pjdr2_5246: Nucleoside diphosphate kinase (EC 2.7.4.6) Gene: Pjdr2_1217: Nucleoside diphosphate kinase (EC 2.7.4.6) Gene: Pjdr2_2412: Nucleoside diphosphate kinase (EC 2.7.4.6)	Nucleoside diphosphate kinase (EC 2.7.4.6)

CRON 115.
lutP	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU34190: L-lactate permease	Bacillus amyloliquefaciens FZB42 Gene: RBAM_031500: L-lactate permease	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi03677: L-lactate permease	2 Anoxybacillus flavithermus WK1* Gene: Aflv_0347: L-lactate permease Site: position = -121 score = 4.43414 sequence = AAATTTTTAAATATT Gene: Aflv_2011: L-lactate permease	Geobacillus kaustophilus HTA426 Gene: GK0398: L-lactate permease	Bacillus cereus ATCC 14579	2 Bacillus halodurans C-125* Gene: BH0219: L-lactate permease Site: position = -123 score = 4.40773 sequence = ATTTATCAGTAAATT Gene: BH1831: L-lactate permease	Bacillus clausii KSM-K16 Gene: ABC0974: L-lactate permease	Oceanobacillus iheyensis HTE831 Gene: OB0368: L-lactate permease	Paenibacillus sp. JDR-2	L-lactate permease
lutA	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU34050: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit	Bacillus amyloliquefaciens FZB42 Gene: RBAM_031470: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit	* Bacillus pumilus SAFR-032 Site: position = -103 score = 4.62954 sequence = AAATTTCAGAAATTT Gene: BPUM_1672: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit	Bacillus licheniformis DSM 13 Gene: BLi03675: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit	Anoxybacillus flavithermus WK1 Gene: Aflv_2009: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit	Geobacillus kaustophilus HTA426 Gene: GK0395: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit	* Bacillus cereus ATCC 14579 Site: position = -149 score = 4.6112 sequence = AATTTTCTGATAAAA Site: position = -165 score = 4.53183 sequence = AATCTTTTAAAAATT Gene: BC1303: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit	Bacillus halodurans C-125 Gene: BH1832: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit	Bacillus clausii KSM-K16 Gene: ABC0975: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit	Oceanobacillus iheyensis HTE831 Gene: OB0370: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit	Paenibacillus sp. JDR-2	Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit
lutB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU34040: Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit	Bacillus amyloliquefaciens FZB42 Gene: RBAM_031460: Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit	Bacillus pumilus SAFR-032 Gene: BPUM_1673: Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit	Bacillus licheniformis DSM 13 Gene: BLi03674: Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit	Anoxybacillus flavithermus WK1 Gene: Aflv_2008: Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit	Geobacillus kaustophilus HTA426 Gene: GK0394: Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit	Bacillus cereus ATCC 14579 Gene: BC1304: Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit	Bacillus halodurans C-125 Gene: BH1833: Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit	Bacillus clausii KSM-K16 Gene: ABC0976: Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit	Oceanobacillus iheyensis HTE831 Gene: OB0371: Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit	Paenibacillus sp. JDR-2	Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit
lutC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU34030: Predicted L-lactate dehydrogenase, hypothetical protein subunit	Bacillus amyloliquefaciens FZB42 Gene: RBAM_031450: Predicted L-lactate dehydrogenase, hypothetical protein subunit	Bacillus pumilus SAFR-032 Gene: BPUM_1674: Predicted L-lactate dehydrogenase, hypothetical protein subunit	Bacillus licheniformis DSM 13 Gene: BLi03673: Predicted L-lactate dehydrogenase, hypothetical protein subunit	Anoxybacillus flavithermus WK1 Gene: Aflv_2007: Predicted L-lactate dehydrogenase, hypothetical protein subunit	Geobacillus kaustophilus HTA426 Gene: GK0393: Predicted L-lactate dehydrogenase, hypothetical protein subunit	Bacillus cereus ATCC 14579 Gene: BC1305: Predicted L-lactate dehydrogenase, hypothetical protein subunit	Bacillus halodurans C-125 Gene: BH1834: Predicted L-lactate dehydrogenase, hypothetical protein subunit	Bacillus clausii KSM-K16 Gene: ABC0977: Predicted L-lactate dehydrogenase, hypothetical protein subunit	Oceanobacillus iheyensis HTE831 Gene: OB0372: Predicted L-lactate dehydrogenase, hypothetical protein subunit	Paenibacillus sp. JDR-2	Predicted L-lactate dehydrogenase, hypothetical protein subunit
lutR	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU34180: Transcriptional regulator of L-lactate utilization, GntR family	Bacillus amyloliquefaciens FZB42 Gene: RBAM_031490: Transcriptional regulator of L-lactate utilization, GntR family	* Bacillus pumilus SAFR-032 Site: position = -109 score = 4.56342 sequence = GATTTTTTGAAAATT Gene: BPUM_3062: Transcriptional regulator of L-lactate utilization, GntR family	Bacillus licheniformis DSM 13 Gene: BLi03676: Transcriptional regulator of L-lactate utilization, GntR family	* Anoxybacillus flavithermus WK1 Site: position = -60 score = 4.43414 sequence = AATATTTAAAAATTT Gene: Aflv_2010: Transcriptional regulator of L-lactate utilization, GntR family	Geobacillus kaustophilus HTA426 Gene: GK0396: Transcriptional regulator of L-lactate utilization, GntR family	Bacillus cereus ATCC 14579 Gene: BC1302: Transcriptional regulator of L-lactate utilization, GntR family	Bacillus halodurans C-125 Gene: BH1835: Transcriptional regulator of L-lactate utilization, GntR family	Bacillus clausii KSM-K16 Gene: ABC0978: Transcriptional regulator of L-lactate utilization, GntR family	2 Oceanobacillus iheyensis HTE831* Gene: OB0369: Transcriptional regulator of L-lactate utilization, GntR family Site: position = -121 score = 4.96778 sequence = ATTTTTTTGAAAATT Gene: OB2606: Transcriptional regulator of L-lactate utilization, GntR family	Paenibacillus sp. JDR-2	Transcriptional regulator of L-lactate utilization, GntR family

CRON 116.
gabP	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -48 score = 4.66914 sequence = AATTATCATAATATT Gene: BSU06310: Gamma-aminobutyrate (GABA) permease	* Bacillus amyloliquefaciens FZB42 Site: position = -160 score = 4.2974 sequence = AAATAACAGAAAATT Site: position = -45 score = 4.00785 sequence = ACTTGTCGGAATATT Gene: RBAM_006710: Gamma-aminobutyrate (GABA) permease	* Bacillus pumilus SAFR-032 Site: position = -231 score = 4.53473 sequence = AAATTTCAGAATAAT Site: position = -33 score = 4.34864 sequence = AATATTCTAAAAACA Gene: BPUM_0543: Gamma-aminobutyrate (GABA) permease	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	* Bacillus cereus ATCC 14579 Site: position = -218 score = 4.50087 sequence = TAATATCTGAAAATT Gene: BC3724: Gamma-aminobutyrate (GABA) permease	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Gamma-aminobutyrate (GABA) permease

CRON 117.
srfAA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -440 score = 4.43747 sequence = ATTTTTCTGTAAATA Gene: BSU03480: Surfactin synthetase subunit 1	* Bacillus amyloliquefaciens FZB42 Site: position = -398 score = 4.41746 sequence = AATATTTTTAAAAAT Gene: RBAM_003650: Surfactin synthetase subunit 1	3 Bacillus pumilus SAFR-032* Site: position = -366 score = 3.95682 sequence = TATTTTCGGTAAATA Gene: BPUM_0319: Surfactin synthetase subunit 1 Gene: BPUM_0322: Surfactin synthetase subunit 1 Gene: BPUM_0323: Surfactin synthetase subunit 1	* Bacillus licheniformis DSM 13 Site: position = -418 score = 4.20423 sequence = ATTTTTTTGTCAATT Gene: BLi00401: Surfactin synthetase subunit 1	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Surfactin synthetase subunit 1
srfAB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU03490: Surfactin synthetase subunit 2	Bacillus amyloliquefaciens FZB42 Gene: RBAM_003660: Surfactin synthetase subunit 2	Bacillus pumilus SAFR-032 Gene: BPUM_0320: Surfactin synthetase subunit 2	Bacillus licheniformis DSM 13 Gene: BLi00402: Surfactin synthetase subunit 2	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Surfactin synthetase subunit 2
srfAC	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032 Gene: BPUM_0321: Bacitracin synthetase 3 (BA3)( EC:5.1.1.11,EC:5.1.1.13 )	Bacillus licheniformis DSM 13 Gene: BLi00403: Bacitracin synthetase 3 (BA3)( EC:5.1.1.11,EC:5.1.1.13 )	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Bacitracin synthetase 3 (BA3)( EC:5.1.1.11,EC:5.1.1.13 )
srfAD	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032 Gene: BPUM_0324: Surfactin synthetase thioesterase subunit (EC 3.1.2.-)	Bacillus licheniformis DSM 13 Gene: BLi00404: Surfactin synthetase thioesterase subunit (EC 3.1.2.-)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Surfactin synthetase thioesterase subunit (EC 3.1.2.-)
comS	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU03500: Regulator of genetic competence	Bacillus amyloliquefaciens FZB42 Gene: RBAM_003670: Regulator of genetic competence	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Regulator of genetic competence

CRON 118.
putB	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -106 score = 4.14923 sequence = AATAATCAGAATCTT Site: position = -89 score = 4.50604 sequence = TATTTTGAGAATATT Gene: BSU03200: Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)	* Bacillus amyloliquefaciens FZB42 Site: position = -23 score = 4.82589 sequence = TATTTTTAGAATATT Gene: RBAM_003440: Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)	Bacillus pumilus SAFR-032 Gene: BPUM_0300: Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)	* Bacillus licheniformis DSM 13 Site: position = -155 score = 4.25349 sequence = AAGTTTCTGAAAAAA Gene: BLi00373: Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)
putC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU03210: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_003450: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)	Bacillus pumilus SAFR-032 Gene: BPUM_0301: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)	Bacillus licheniformis DSM 13 Gene: BLi00374: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)	Anoxybacillus flavithermus WK1 Gene: Aflv_0249: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)	Geobacillus kaustophilus HTA426 Gene: GK0187: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)	* Bacillus cereus ATCC 14579 Site: position = -102 score = 4.60772 sequence = AATTTTTAAAATATA Site: position = -121 score = 4.60772 sequence = TATATTTTAAAAATT Gene: BC0344: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)	2 Bacillus halodurans C-125 Gene: BH3940: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) Gene: BH2737: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)	Bacillus clausii KSM-K16 Gene: ABC0965: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)	Oceanobacillus iheyensis HTE831 Gene: OB1349: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)	Paenibacillus sp. JDR-2	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
putP	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU03220: Proline/sodium symporter (TC 2.A.21.2.1)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_003460: Proline/sodium symporter (TC 2.A.21.2.1)	Bacillus pumilus SAFR-032	* Bacillus licheniformis DSM 13 Site: position = -85 score = 4.47507 sequence = ATTAGTCTAAAAATT Gene: BLi00375: Proline/sodium symporter (TC 2.A.21.2.1)	Anoxybacillus flavithermus WK1	* Geobacillus kaustophilus HTA426 Site: position = -158 score = 4.84058 sequence = AATTTACAGAATATT Gene: GK3452: Proline/sodium symporter (TC 2.A.21.2.1)	* Bacillus cereus ATCC 14579 Site: position = -106 score = 4.59837 sequence = ACATTTCTGAAAATT Site: position = -76 score = 4.64506 sequence = ATTTTTCAGAATAAT Gene: BC1231: Proline/sodium symporter (TC 2.A.21.2.1)	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC3924: Proline/sodium symporter (TC 2.A.21.2.1)	Oceanobacillus iheyensis HTE831 Gene: OB1351: Proline/sodium symporter (TC 2.A.21.2.1)	Paenibacillus sp. JDR-2	Proline/sodium symporter (TC 2.A.21.2.1)
putR	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU03230: Transcriptional regulator of proline utilization	Bacillus amyloliquefaciens FZB42 Gene: RBAM_003470: Transcriptional regulator of proline utilization	Bacillus pumilus SAFR-032 Gene: BPUM_0302: Transcriptional regulator of proline utilization	Bacillus licheniformis DSM 13 Gene: BLi00376: Transcriptional regulator of proline utilization	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Transcriptional regulator of proline utilization

CRON 119.
oppA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -116 score = 4.26457 sequence = AATAATCAGAAAAGA Gene: BSU11430: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	* Bacillus amyloliquefaciens FZB42 Site: position = -115 score = 4.26457 sequence = AATAATCAGAAAAGA Gene: RBAM_011430: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	* Anoxybacillus flavithermus WK1 Site: position = -102 score = 4.56987 sequence = AAATGTTAGAAAATT Gene: Aflv_2133: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	Geobacillus kaustophilus HTA426 Gene: GK0811: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	Bacillus cereus ATCC 14579	* Bacillus halodurans C-125 Site: position = -32 score = 4.34864 sequence = TATTTTCAAAATAGT Gene: BH0347: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	* Bacillus clausii KSM-K16 Site: position = -55 score = 4.45097 sequence = AATAATTTTAAAATT Site: position = -245 score = 4.48714 sequence = TATTTTTGGAAAATT Gene: ABC3661: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
oppB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU11440: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_011440: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	* Bacillus pumilus SAFR-032 Site: position = -38 score = 4.36334 sequence = AATATACAGAAAAGT Gene: BPUM_1071: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	* Bacillus licheniformis DSM 13 Site: position = -30 score = 4.34787 sequence = AATAGACTGAATATT Gene: BLi01233: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	Anoxybacillus flavithermus WK1 Gene: Aflv_2132: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	Geobacillus kaustophilus HTA426 Gene: GK0812: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	* Bacillus cereus ATCC 14579 Site: position = -65 score = 4.41334 sequence = TATTTTAAAAAAATA Gene: BC1180: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	Bacillus halodurans C-125 Gene: BH0348: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	Bacillus clausii KSM-K16 Gene: ABC3660: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
oppC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU11450: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_011450: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	Bacillus pumilus SAFR-032 Gene: BPUM_1072: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	Bacillus licheniformis DSM 13 Gene: BLi01234: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	Anoxybacillus flavithermus WK1 Gene: Aflv_2131: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	Geobacillus kaustophilus HTA426 Gene: GK0813: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	Bacillus cereus ATCC 14579 Gene: BC1181: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	Bacillus halodurans C-125 Gene: BH0349: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	Bacillus clausii KSM-K16 Gene: ABC3659: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
oppD	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU11460: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_011460: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	Bacillus pumilus SAFR-032 Gene: BPUM_1073: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	Bacillus licheniformis DSM 13 Gene: BLi01235: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	Anoxybacillus flavithermus WK1 Gene: Aflv_2130: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	Geobacillus kaustophilus HTA426 Gene: GK0814: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	Bacillus cereus ATCC 14579 Gene: BC1182: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	Bacillus halodurans C-125 Gene: BH0350: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	Bacillus clausii KSM-K16 Gene: ABC3658: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
oppF	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU11470: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_011470: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	Bacillus pumilus SAFR-032 Gene: BPUM_1074: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	Bacillus licheniformis DSM 13 Gene: BLi01236: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	Anoxybacillus flavithermus WK1 Gene: Aflv_2129: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	Geobacillus kaustophilus HTA426 Gene: GK0815: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	Bacillus cereus ATCC 14579 Gene: BC1183: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	Bacillus halodurans C-125 Gene: BH0351: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	Bacillus clausii KSM-K16 Gene: ABC3657: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)
BH0352	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH0352: Carboxypeptidase G2	Bacillus clausii KSM-K16 Gene: ABC1036: Carboxypeptidase G2	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Carboxypeptidase G2

CRON 120.
rocD	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -221 score = 4.69887 sequence = TATTTTCTTAATATT Gene: BSU40340: Ornithine aminotransferase (EC 2.6.1.13)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_037250: Ornithine aminotransferase (EC 2.6.1.13)	Bacillus pumilus SAFR-032 Gene: BPUM_3060: Ornithine aminotransferase (EC 2.6.1.13)	* Bacillus licheniformis DSM 13 Site: position = -114 score = 4.79867 sequence = AATGTTCTGAAAATT Gene: BLi00422: Ornithine aminotransferase (EC 2.6.1.13)	Anoxybacillus flavithermus WK1 Gene: Aflv_2206: Ornithine aminotransferase (EC 2.6.1.13)	Geobacillus kaustophilus HTA426 Gene: GK0188: Ornithine aminotransferase (EC 2.6.1.13)	Bacillus cereus ATCC 14579 Gene: BC1149: Ornithine aminotransferase (EC 2.6.1.13)	Bacillus halodurans C-125 Gene: BH3943: Ornithine aminotransferase (EC 2.6.1.13)	Bacillus clausii KSM-K16 Gene: ABC0017: Ornithine aminotransferase (EC 2.6.1.13)	Oceanobacillus iheyensis HTE831 Gene: OB2287: Ornithine aminotransferase (EC 2.6.1.13)	Paenibacillus sp. JDR-2 Gene: Pjdr2_3902: Ornithine aminotransferase (EC 2.6.1.13)	Ornithine aminotransferase (EC 2.6.1.13)
rocE	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU40330: Arginine permease RocE	Bacillus amyloliquefaciens FZB42 Gene: RBAM_037240: Arginine permease RocE	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi00423: Arginine permease RocE	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Arginine permease RocE
rocF	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU40320: Arginase (EC 3.5.3.1)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_037230: Arginase (EC 3.5.3.1)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi00424: Arginase (EC 3.5.3.1)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Arginase (EC 3.5.3.1)

CRON 121.
crnA	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	* Paenibacillus sp. JDR-2 Site: position = -199 score = 4.6961 sequence = AATTGTGTGAAAATT Site: position = -103 score = 5.31656 sequence = AATATTCAGAAAATT Gene: Pjdr2_6138: Creatininase (EC 3.5.2.10)	Creatininase (EC 3.5.2.10)
ABC3747	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC3747: Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_6137: Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein	Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein
Pjdr2_6136	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_6136: FAD linked oxidase domain protein	FAD linked oxidase domain protein
ABC3746	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC3746: Nitrate/sulfonate/bicarbonate ABC transporter permease	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_6135: Nitrate/sulfonate/bicarbonate ABC transporter permease	Nitrate/sulfonate/bicarbonate ABC transporter permease
Pjdr2_6134	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_6134: Amidohydrolase 3	Amidohydrolase 3
ABC3745	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC3745: Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_6133: Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein	Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
wrbA	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_6132: Flavoprotein WrbA	Flavoprotein WrbA
codA	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC4032: Cytosine deaminase (EC 3.5.4.1)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_6131: Cytosine deaminase (EC 3.5.4.1)	Cytosine deaminase (EC 3.5.4.1)

CRON 122.
ushA	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	* Anoxybacillus flavithermus WK1 Site: position = -50 score = 4.33625 sequence = AATTTTGTTATAATT Gene: Aflv_2607: 5'-nucleotidase (EC 3.1.3.5)	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH0026: 5'-nucleotidase (EC 3.1.3.5)	Bacillus clausii KSM-K16 Gene: ABC0966: 5'-nucleotidase (EC 3.1.3.5)	Oceanobacillus iheyensis HTE831	* Paenibacillus sp. JDR-2 Site: position = -96 score = 5.21946 sequence = AATTTTCAGATAATT Gene: Pjdr2_0438: 5'-nucleotidase (EC 3.1.3.5)	5'-nucleotidase (EC 3.1.3.5)

CRON 123.
Pjdr2_3723	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	* Paenibacillus sp. JDR-2 Site: position = -131 score = 4.82755 sequence = AATTTACAAAAAATT Gene: Pjdr2_3723: Oligopeptide/dipeptide ABC transporter, periplasmic component	Oligopeptide/dipeptide ABC transporter, periplasmic component
Pjdr2_3722	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_3722: Oligopeptide/dipeptide ABC transporter, permease components	Oligopeptide/dipeptide ABC transporter, permease components
Pjdr2_3721	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_3721: Oligopeptide/dipeptide ABC transporter, permease components	Oligopeptide/dipeptide ABC transporter, permease components
Pjdr2_3720	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_3720: Oligopeptide/dipeptide ABC transporter, ATPase subunit	Oligopeptide/dipeptide ABC transporter, ATPase subunit
Pjdr2_3719	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_3719: Oligopeptide/dipeptide ABC transporter, ATPase subunit	Oligopeptide/dipeptide ABC transporter, ATPase subunit
Pjdr2_3718	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_3718: Hydrolase (HAD superfamily)-like protein	Hydrolase (HAD superfamily)-like protein
Pjdr2_3717	Bacillus subtilis subsp. subtilis str. 168	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_3717: Transcriptional regulator, LacI family	Transcriptional regulator, LacI family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog CodY - Bacillales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --