Regulon of CodY in Bacillus subtilis subsp. subtilis str. 168

Properties
Regulator type:	Transcription factor
TF locus tag:	BSU16170
Regulator family:	CodY
Regulation mode:
Biological process:	Amino acid metabolism
Effector:	Guanosine triphosphate; Branched-chain amino acids
Regulog:	CodY - Bacillales
Statistics of regulated genes:
- Genes	151
- Operons	73
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 445 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By TF family - CodY
By effector - Guanosine triphosphate
By effector - Branched-chain amino acids
By pathway - Amino acid metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -633 Score: 4.1 Sequence: ATTAATAAAAAAATT Position: -544 Score: 4.7 Sequence: AATTGTCTAATAATT Locus tag: BSU28310 Name: ilvB Funciton: Acetolactate synthase large subunit (EC 2.2.1.6) Locus tag: BSU28300 Name: ilvH Funciton: Acetolactate synthase small subunit (EC 2.2.1.6) Locus tag: BSU28290 Name: ilvC Funciton: Ketol-acid reductoisomerase (EC 1.1.1.86) Locus tag: BSU28280 Name: leuA Funciton: 2-isopropylmalate synthase (EC 2.3.3.13) Locus tag: BSU28270 Name: leuB Funciton: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Locus tag: BSU28260 Name: leuC Funciton: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Locus tag: BSU28250 Name: leuD Funciton: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
	BSU28310	ilvB	Acetolactate synthase large subunit (EC 2.2.1.6)
	BSU28300	ilvH	Acetolactate synthase small subunit (EC 2.2.1.6)
	BSU28290	ilvC	Ketol-acid reductoisomerase (EC 1.1.1.86)
	BSU28280	leuA	2-isopropylmalate synthase (EC 2.3.3.13)
	BSU28270	leuB	3-isopropylmalate dehydrogenase (EC 1.1.1.85)
	BSU28260	leuC	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
	BSU28250	leuD	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
Position: -440 Score: 4.4 Sequence: ATTTTTCTGTAAATA Locus tag: BSU03480 Name: srfAA Funciton: Surfactin synthetase subunit 1 Locus tag: BSU03490 Name: srfAB Funciton: Surfactin synthetase subunit 2 Locus tag: BSU03500 Name: comS Funciton: Regulator of genetic competence
	BSU03480	srfAA	Surfactin synthetase subunit 1
	BSU03490	srfAB	Surfactin synthetase subunit 2
	BSU03500	comS	Regulator of genetic competence
Position: -257 Score: 4.8 Sequence: AATATTCAAATAATT Locus tag: BSU02060 Name: ybxG Funciton: Amino acid permease
	BSU02060	ybxG	Amino acid permease
Position: -78 Score: 4.6 Sequence: TATATTTTAAAAATT Locus tag: BSU29680 Name: acsA Funciton: Acetyl-coenzyme A synthetase (EC 6.2.1.1)
	BSU29680	acsA	Acetyl-coenzyme A synthetase (EC 6.2.1.1)
Position: -186 Score: 4.4 Sequence: TATTTTATAAAAATA Locus tag: BSU16980 Name: spoVS Funciton: Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)
	BSU16980	spoVS	Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)
Position: -182 Score: 4 Sequence: atgTgTCtGAaAata Locus tag: BSU29470 Name: ackA Funciton: Acetate kinase (EC 2.7.2.1)
	BSU29470	ackA	Acetate kinase (EC 2.7.2.1)
Position: -80 Score: 4.4 Sequence: TTTTTTCTAATAATT Locus tag: BSU19579 Name: yoyD Funciton: Hypothetical protein Locus tag: BSU19580 Name: yodF Funciton: SSS family solute:sodium (Na+) symporter
	BSU19579	yoyD	Hypothetical protein
	BSU19580	yodF	SSS family solute:sodium (Na+) symporter
Position: -115 Score: 4.8 Sequence: TAATTTCTGAAAATT Locus tag: BSU02370 Name: gamR Funciton: Predicted transcriptional regulator of glucosamine utilization, GntR family
	BSU02370	gamR	Predicted transcriptional regulator of glucosamine utilization, GntR family
Position: -100 Score: 4.8 Sequence: AAATTTCAGAAAATA Locus tag: BSU32610 Name: frlB Funciton: Fructoselysine 6-phosphate deglycase (EC 3.5.-.-) Locus tag: BSU32600 Name: frlO Funciton: Putative fructoselysine ABC transporter, periplasmic ligand binding protein Locus tag: BSU32590 Name: yurN Funciton: Putative fructoselysine ABC transporter, permease Locus tag: BSU32580 Name: yurM Funciton: Putative fructoselysine ABC transporter, permease Locus tag: BSU32570 Name: frlD Funciton: Fructoselysine kinase
	BSU32610	frlB	Fructoselysine 6-phosphate deglycase (EC 3.5.-.-)
	BSU32600	frlO	Putative fructoselysine ABC transporter, periplasmic ligand binding protein
	BSU32590	yurN	Putative fructoselysine ABC transporter, permease
	BSU32580	yurM	Putative fructoselysine ABC transporter, permease
	BSU32570	frlD	Fructoselysine kinase
Position: -121 Score: 4.8 Sequence: ATTTTTCATAAAATT Locus tag: BSU03300 Name: nasD Funciton: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) Locus tag: BSU03290 Name: nasE Funciton: Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) Locus tag: BSU03280 Name: nasF Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
	BSU03300	nasD	Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
	BSU03290	nasE	Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)
	BSU03280	nasF	Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
Position: -57 Score: 4.4 Sequence: AATATTCAGACTTTT Locus tag: BSU10070 Name: yhaA Funciton: N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)
	BSU10070	yhaA	N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)
Position: -84 Score: 4.7 Sequence: AAAATTCAAAAAATT Locus tag: BSU12400 Name: yjnA Funciton: Putative integral membrane protein
	BSU12400	yjnA	Putative integral membrane protein
Position: -29 Score: 4.7 Sequence: AATTTTCTAACAATA Locus tag: BSU11900 Name: yjcL Funciton: Putative integral membrane protein
	BSU11900	yjcL	Putative integral membrane protein
Position: -116 Score: 4.3 Sequence: ATTATTCTGAATAGT Locus tag: BSU03010 Name: amhX Funciton: Amidohydrolase amhX (EC 3.5.1.-)
	BSU03010	amhX	Amidohydrolase amhX (EC 3.5.1.-)
Position: -147 Score: 4.5 Sequence: AATATTTTGAAGATT Locus tag: BSU13190 Name: ispA Funciton: S8 family serine protease precursor (EC 3.4.21.-)
	BSU13190	ispA	S8 family serine protease precursor (EC 3.4.21.-)
Position: -218 Score: 4.7 Sequence: ATTTTTCAAACAATT Locus tag: BSU34530 Name: cotR Funciton: Putative sporulation hydrolase (EC=3.1.1.-)
	BSU34530	cotR	Putative sporulation hydrolase (EC=3.1.1.-)
Position: -76 Score: 4.3 Sequence: AATTTTTTAAAAACA Locus tag: BSU22260 Name: yppF Funciton: Hypothetical protein
	BSU22260	yppF	Hypothetical protein
Position: -68 Score: 4.6 Sequence: AATATTTAAAAAATA Locus tag: BSU09430 Name: citR Funciton: Transcriptional regulator of citrate synthase, LysR family
	BSU09430	citR	Transcriptional regulator of citrate synthase, LysR family
Position: -225 Score: 4.7 Sequence: AATATTAAGATAATT Locus tag: BSU38950 Name: metE2 Funciton: Methionine synthase II (cobalamin-independent)
	BSU38950	metE2	Methionine synthase II (cobalamin-independent)
Position: -59 Score: 4.7 Sequence: TATTATCTGACAATT Position: -44 Score: 4.6 Sequence: AATTGACAGAATATT Locus tag: BSU29600 Name: braB Funciton: Branched-chain amino acid transport system carrier protein
	BSU29600	braB	Branched-chain amino acid transport system carrier protein
Position: -52 Score: 4.7 Sequence: AGTTTTATGAAAATT Locus tag: BSU15340 Name: ylmA Funciton: Putative ABC transporter, ATP-binding protein
	BSU15340	ylmA	Putative ABC transporter, ATP-binding protein
Position: -181 Score: 4.7 Sequence: ATTTTTCTAACAATT Locus tag: BSU09460 Name: yhdG Funciton: Amino acid permease Locus tag: BSU09470 Name: yhdH Funciton: Putative sodium-dependent transporter
	BSU09460	yhdG	Amino acid permease
	BSU09470	yhdH	Putative sodium-dependent transporter
Position: -34 Score: 4.7 Sequence: AATATTAAGAAAATA Locus tag: BSU40350 Name: rocR Funciton: Transcriptional activator of arginine utilization, Fis family
	BSU40350	rocR	Transcriptional activator of arginine utilization, Fis family
Position: -82 Score: 4.9 Sequence: ATTTTTCTGAAAAAT Locus tag: BSU30640 Name: ytkC Funciton: Hypothetical membrane protein
	BSU30640	ytkC	Hypothetical membrane protein
Position: -118 Score: 4.9 Sequence: AATATTCTGAAATTT Position: -38 Score: 4.6 Sequence: AATATTTAAACAATT Locus tag: BSU02390 Name: ybgE Funciton: Branched-chain amino acid aminotransferase (EC 2.6.1.42)
	BSU02390	ybgE	Branched-chain amino acid aminotransferase (EC 2.6.1.42)
Position: -102 Score: 4.9 Sequence: TATTATCAGAAAATT Locus tag: BSU31540 Name: nupN Funciton: Guanosine ABC transport system, substrate-binding component Locus tag: BSU31550 Name: nupO Funciton: Guanosine ABC transport system, ATP-binding protein Locus tag: BSU31560 Name: nupP Funciton: Guanosine ABC transport system, permease component Ia (FIG025991) / Unspecified monosaccharide ABC transport system, permease component Ib (FIG143636) Locus tag: BSU31570 Name: nupQ Funciton: Guanosine ABC transport system, permease component 2
	BSU31540	nupN	Guanosine ABC transport system, substrate-binding component
	BSU31550	nupO	Guanosine ABC transport system, ATP-binding protein
	BSU31560	nupP	Guanosine ABC transport system, permease component Ia (FIG025991) / Unspecified monosaccharide ABC transport system, permease component Ib (FIG143636)
	BSU31570	nupQ	Guanosine ABC transport system, permease component 2
Position: -141 Score: 5 Sequence: AATTTTCTGAATAAT Locus tag: BSU19340 Name: yocR Funciton: Putative sodium-dependent transporter
	BSU19340	yocR	Putative sodium-dependent transporter
Position: -92 Score: 5 Sequence: ATTATTCAGAAAATT Locus tag: BSU19350 Name: yocS Funciton: Sodium-dependent transporter
	BSU19350	yocS	Sodium-dependent transporter
Position: -200 Score: 4.4 Sequence: AAAAGTCTAAAAATT Locus tag: BSU09590 Name: yhdT Funciton: Hemolysins and related proteins containing CBS domains
	BSU09590	yhdT	Hemolysins and related proteins containing CBS domains
Position: -60 Score: 5 Sequence: AATTTTCAGAAAAGT Locus tag: BSU27430 Name: glnQ Funciton: Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2) Locus tag: BSU27440 Name: glnH Funciton: Glutamine-binding protein Locus tag: BSU27450 Name: glnM Funciton: Glutamine transport system permease protein GlnM (TC 3.A.1.3.2) Locus tag: BSU27460 Name: glnP Funciton: Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)
	BSU27430	glnQ	Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)
	BSU27440	glnH	Glutamine-binding protein
	BSU27450	glnM	Glutamine transport system permease protein GlnM (TC 3.A.1.3.2)
	BSU27460	glnP	Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)
Position: -139 Score: 4.4 Sequence: AAAAATTTGAAAATT Locus tag: BSU09560 Name: cueR Funciton: Transcriptional regulator, MerR family
	BSU09560	cueR	Transcriptional regulator, MerR family
Position: -890 Score: 4.9 Sequence: AATTTTTTAAATATT Locus tag: BSU36660 Name: ureA Funciton: Urease gamma subunit (EC 3.5.1.5) Locus tag: BSU36650 Name: ureB Funciton: Urease beta subunit (EC 3.5.1.5) Locus tag: BSU36640 Name: ureC Funciton: Urease alpha subunit (EC 3.5.1.5)
	BSU36660	ureA	Urease gamma subunit (EC 3.5.1.5)
	BSU36650	ureB	Urease beta subunit (EC 3.5.1.5)
	BSU36640	ureC	Urease alpha subunit (EC 3.5.1.5)
Position: -90 Score: 5.1 Sequence: AATTTTCTGAAATTT Locus tag: BSU13530 Name: kinE Funciton: Sporulation kinase E Locus tag: BSU13540 Name: ogt Funciton: Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)
	BSU13530	kinE	Sporulation kinase E
	BSU13540	ogt	Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)
Position: -90 Score: 4.4 Sequence: TATTTTTAGAAAATG Locus tag: BSU31470 Name: kapD Funciton: KapD, inhibitor of KinA pathway to sporulation
	BSU31470	kapD	KapD, inhibitor of KinA pathway to sporulation
Position: -90 Score: 4.4 Sequence: ATTTATTAAAAAATT Locus tag: BSU09990 Name: hpr Funciton: Transcriptional repressor of sporulation and extracellular protein, MarR family
	BSU09990	hpr	Transcriptional repressor of sporulation and extracellular protein, MarR family
Position: -183 Score: 4.5 Sequence: AATAATTAGAAAATA Locus tag: BSU32260 Name: hom Funciton: Homoserine dehydrogenase (EC 1.1.1.3) Locus tag: BSU32250 Name: thrC Funciton: Threonine synthase (EC 4.2.3.1) Locus tag: BSU32240 Name: thrB Funciton: Homoserine kinase (EC 2.7.1.39)
	BSU32260	hom	Homoserine dehydrogenase (EC 1.1.1.3)
	BSU32250	thrC	Threonine synthase (EC 4.2.3.1)
	BSU32240	thrB	Homoserine kinase (EC 2.7.1.39)
Position: -65 Score: 4.9 Sequence: AATTGTCTGAAAAAT Locus tag: BSU33730 Name: opuBA Funciton: Choline ABC transport system, ATP-binding protein OpuBA Locus tag: BSU33720 Name: opuBB Funciton: Choline ABC transport system, permease protein OpuBB Locus tag: BSU33710 Name: opuBC Funciton: Choline ABC transport system, choline-binding protein OpuBC Locus tag: BSU33700 Name: opuBD Funciton: Choline ABC transport system, permease protein OpuBD
	BSU33730	opuBA	Choline ABC transport system, ATP-binding protein OpuBA
	BSU33720	opuBB	Choline ABC transport system, permease protein OpuBB
	BSU33710	opuBC	Choline ABC transport system, choline-binding protein OpuBC
	BSU33700	opuBD	Choline ABC transport system, permease protein OpuBD
Position: -42 Score: 5 Sequence: ACTTTTCAGAAAATT Locus tag: BSU33830 Name: opuCA Funciton: Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA Locus tag: BSU33820 Name: opuCB Funciton: Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB Locus tag: BSU33810 Name: opuCC Funciton: Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC Locus tag: BSU33800 Name: opuCD Funciton: Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD
	BSU33830	opuCA	Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA
	BSU33820	opuCB	Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB
	BSU33810	opuCC	Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC
	BSU33800	opuCD	Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD
Position: -98 Score: 4.8 Sequence: AATTTTCAGTAAATA Position: -62 Score: 4.5 Sequence: TATTTTTTGATTATT Locus tag: BSU13950 Name: mcpC Funciton: Methyl-accepting chemotaxis protein McpC
	BSU13950	mcpC	Methyl-accepting chemotaxis protein McpC
Position: -172 Score: 5 Sequence: AATATTCAGAAAAAT Locus tag: BSU06670 Name: gatC Funciton: Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7) Locus tag: BSU06680 Name: gatA Funciton: Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7) Locus tag: BSU06690 Name: gatB Funciton: Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)
	BSU06670	gatC	Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)
	BSU06680	gatA	Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)
	BSU06690	gatB	Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7)
Position: -225 Score: 4.5 Sequence: AATTTTTAGACAACT Locus tag: BSU10420 Name: comK Funciton: Competence transcription factor
	BSU10420	comK	Competence transcription factor
Position: -170 Score: 4.7 Sequence: AATTTTCTCACAATT Locus tag: BSU17990 Name: sspO Funciton: Small, acid-soluble spore protein O Locus tag: BSU17980 Name: sspP Funciton: Small, acid-soluble spore protein P
	BSU17990	sspO	Small, acid-soluble spore protein O
	BSU17980	sspP	Small, acid-soluble spore protein P
Position: -55 Score: 4.6 Sequence: TATTTTTTAAATATT Locus tag: BSU09440 Name: citA Funciton: Citrate synthase (si) (EC 2.3.3.1)
	BSU09440	citA	Citrate synthase (si) (EC 2.3.3.1)
Position: -95 Score: 4.4 Sequence: AAATTTCAAAAATTT Position: -48 Score: 4.6 Sequence: AATATACTGAATATT Locus tag: BSU01700 Name: murQ Funciton: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-) Locus tag: BSU01690 Name: murR Funciton: Transcriptional regulator of muropeptide rescue pathway operon, RpiR family Locus tag: BSU01680 Name: ybbF Funciton: PTS system, IIB component (EC 2.7.1.69) / PTS system, IIC component (EC 2.7.1.69) Locus tag: BSU01670 Name: amiE Funciton: Amidase of hydrolyzes the N-acetylmuramyl- L-Ala bond of MurNAc peptides Locus tag: BSU01660 Name: nagZ Funciton: Beta--N-acetylglucosaminidase Locus tag: BSU01650 Name: ybbC Funciton: Hypothetical protein
	BSU01700	murQ	N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-)
	BSU01690	murR	Transcriptional regulator of muropeptide rescue pathway operon, RpiR family
	BSU01680	ybbF	PTS system, IIB component (EC 2.7.1.69) / PTS system, IIC component (EC 2.7.1.69)
	BSU01670	amiE	Amidase of hydrolyzes the N-acetylmuramyl- L-Ala bond of MurNAc peptides
	BSU01660	nagZ	Beta--N-acetylglucosaminidase
	BSU01650	ybbC	Hypothetical protein
Position: -135 Score: 4.4 Sequence: CATTTTCTAAAAATA Locus tag: BSU31480 Name: yuxJ Funciton: MFS family major facilitator transporter Locus tag: BSU31490 Name: pbpD Funciton: Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) Locus tag: BSU31500 Name: yuxK Funciton: Possible thiol-disulphide dehydrogenase
	BSU31480	yuxJ	MFS family major facilitator transporter
	BSU31490	pbpD	Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)
	BSU31500	yuxK	Possible thiol-disulphide dehydrogenase
Position: -48 Score: 4.7 Sequence: AATTATCATAATATT Locus tag: BSU06310 Name: gabP Funciton: Gamma-aminobutyrate (GABA) permease
	BSU06310	gabP	Gamma-aminobutyrate (GABA) permease
Position: -43 Score: 4.5 Sequence: ATTTGTTAGAATATT Locus tag: BSU12920 Name: dppA Funciton: D-aminopeptidase (EC 3.4.11.-) Locus tag: BSU12930 Name: dppB Funciton: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) Locus tag: BSU12940 Name: dppC Funciton: Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) Locus tag: BSU12950 Name: dppD Funciton: Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) Locus tag: BSU12960 Name: dppE Funciton: Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
	BSU12920	dppA	D-aminopeptidase (EC 3.4.11.-)
	BSU12930	dppB	Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)
	BSU12940	dppC	Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)
	BSU12950	dppD	Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)
	BSU12960	dppE	Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
Position: -98 Score: 4.4 Sequence: TTTTTTCAAAAAATA Locus tag: BSU00490 Name: spoVG Funciton: Stage V sporulation protein G required for spore cortex synthesis
	BSU00490	spoVG	Stage V sporulation protein G required for spore cortex synthesis
Position: -256 Score: 5 Sequence: ATTTTTCTGAATATT Locus tag: BSU06660 Name: opuE Funciton: Sodium/proline symporter
	BSU06660	opuE	Sodium/proline symporter
Position: -116 Score: 4.3 Sequence: AATAATCAGAAAAGA Locus tag: BSU11430 Name: oppA Funciton: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) Locus tag: BSU11440 Name: oppB Funciton: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) Locus tag: BSU11450 Name: oppC Funciton: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) Locus tag: BSU11460 Name: oppD Funciton: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) Locus tag: BSU11470 Name: oppF Funciton: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)
	BSU11430	oppA	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
	BSU11440	oppB	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
	BSU11450	oppC	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
	BSU11460	oppD	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
	BSU11470	oppF	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)
Position: -73 Score: 4.6 Sequence: AAATTTCTAATAATT Locus tag: BSU11860 Name: ycjH Funciton: Putative acetyl esterase YjcH (EC 3.1.1.-) Locus tag: BSU11850 Name: yjcG Funciton: RNA ligase/cyclic nucleotide phosphodiesterase Locus tag: BSU11840 Name: yjcF Funciton: GNAT family acetyltransferase YjcF
	BSU11860	ycjH	Putative acetyl esterase YjcH (EC 3.1.1.-)
	BSU11850	yjcG	RNA ligase/cyclic nucleotide phosphodiesterase
	BSU11840	yjcF	GNAT family acetyltransferase YjcF
Position: -68 Score: 4.8 Sequence: TATTTTTTGAATATT Locus tag: BSU21770 Name: ilvA Funciton: Threonine dehydratase biosynthetic (EC 4.3.1.19)
	BSU21770	ilvA	Threonine dehydratase biosynthetic (EC 4.3.1.19)
Position: -44 Score: 4.8 Sequence: TATTTTCAGAAAAGT Locus tag: BSU36550 Name: spoIIQ Funciton: Stage II sporulation protein related to metaloproteases (SpoIIQ)
	BSU36550	spoIIQ	Stage II sporulation protein related to metaloproteases (SpoIIQ)
Position: -64 Score: 4.5 Sequence: AATAAACTGAAAATT Locus tag: BSU21870 Name: ilvD Funciton: Dihydroxy-acid dehydratase (EC 4.2.1.9)
	BSU21870	ilvD	Dihydroxy-acid dehydratase (EC 4.2.1.9)
Position: -44 Score: 4.5 Sequence: AATTATCAGATATTT Locus tag: BSU23070 Name: serA Funciton: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
	BSU23070	serA	D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
Position: -97 Score: 4.6 Sequence: AATTTTTAAAATATA Locus tag: BSU29690 Name: acuA Funciton: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor Locus tag: BSU29700 Name: acuB Funciton: Component of the acetoin degradation regulation pathway Locus tag: BSU29710 Name: acuC Funciton: NAD-independent protein deacetylase AcuC
	BSU29690	acuA	Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor
	BSU29700	acuB	Component of the acetoin degradation regulation pathway
	BSU29710	acuC	NAD-independent protein deacetylase AcuC
Position: -156 Score: 4.9 Sequence: ATTTTTCTGAAAAAT Locus tag: BSU09410 Name: phoB Funciton: Alkaline phosphatase (EC 3.1.3.1)
	BSU09410	phoB	Alkaline phosphatase (EC 3.1.3.1)
Position: -36 Score: 4.7 Sequence: AATTTACTTAAAATT Locus tag: BSU37740 Name: bacA Funciton: Prephenate dehydratase (EC 4.2.1.51) Locus tag: BSU37730 Name: bacB Funciton: Bacilysin biosynthesis protein BacB Locus tag: BSU37720 Name: bacC Funciton: Bacilysin biosynthesis oxidoreductase BacC Locus tag: BSU37710 Name: bacD Funciton: Alanine-anticapsin ligase BacD Locus tag: BSU37700 Name: bacE Funciton: Bacilysin exporter protein BacE Locus tag: BSU37690 Name: mtnE Funciton: Aspartate aminotransferase (EC 2.6.1.1)
	BSU37740	bacA	Prephenate dehydratase (EC 4.2.1.51)
	BSU37730	bacB	Bacilysin biosynthesis protein BacB
	BSU37720	bacC	Bacilysin biosynthesis oxidoreductase BacC
	BSU37710	bacD	Alanine-anticapsin ligase BacD
	BSU37700	bacE	Bacilysin exporter protein BacE
	BSU37690	mtnE	Aspartate aminotransferase (EC 2.6.1.1)
Position: -72 Score: 4.7 Sequence: AATTGTGAGAAAATT Locus tag: BSU18000 Name: citB Funciton: Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)
	BSU18000	citB	Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)
Position: -224 Score: 4.3 Sequence: AAATGTCTGATTATT Locus tag: BSU29140 Name: citZ Funciton: Citrate synthase (si) (EC 2.3.3.1) Locus tag: BSU29130 Name: icd Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) Locus tag: BSU29120 Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
	BSU29140	citZ	Citrate synthase (si) (EC 2.3.3.1)
	BSU29130	icd	Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
	BSU29120	mdh	Malate dehydrogenase (EC 1.1.1.37)
Position: -96 Score: 4.6 Sequence: ATTTGTCTTAAAATT Locus tag: BSU31020 Name: yuaF Funciton: Hypothetical membrane protein Locus tag: BSU31010 Name: yuaG Funciton: Uncharacterized protein YuaG
	BSU31020	yuaF	Hypothetical membrane protein
	BSU31010	yuaG	Uncharacterized protein YuaG
Position: -86 Score: 4.6 Sequence: AATTTTAAGACAAAT Locus tag: BSU31030 Name: yuaE Funciton: Hypothetical protein
	BSU31030	yuaE	Hypothetical protein
Position: -83 Score: 4.4 Sequence: TATTGTATAAAAATT Locus tag: BSU32980 Name: yusZ Funciton: Oxidoreductase, short-chain dehydrogenase/reductase (EC 1.1.1.-)
	BSU32980	yusZ	Oxidoreductase, short-chain dehydrogenase/reductase (EC 1.1.1.-)
Position: -159 Score: 4.5 Sequence: TAATTTCAGACAATT Locus tag: BSU10460 Name: yhjC Funciton: Hypothetical protein Locus tag: BSU10450 Name: yhjB Funciton: Na+/solute symporter
	BSU10460	yhjC	Hypothetical protein
	BSU10450	yhjB	Na+/solute symporter
Position: -134 Score: 4.6 Sequence: CATTTTCAGAAAATA Locus tag: BSU14240 Name: rok Funciton: ComK repressor
	BSU14240	rok	ComK repressor
Position: -118 Score: 4.5 Sequence: TATTATCAGAATATA Locus tag: BSU14520 Name: adeC Funciton: Adenine deaminase (EC 3.5.4.2)
	BSU14520	adeC	Adenine deaminase (EC 3.5.4.2)
Position: -95 Score: 4.4 Sequence: AATTATATAACAATT Locus tag: BSU14620 Name: slp Funciton: Peptidoglycan-associated protein
	BSU14620	slp	Peptidoglycan-associated protein
Position: -165 Score: 4.6 Sequence: AATATTCTGTCAATT Position: -150 Score: 4.7 Sequence: AATTGTCAGATAATA Locus tag: BSU29590 Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7) Locus tag: BSU29580 Name: thiI Funciton: Thiamine biosynthesis protein ThiI
	BSU29590	iscS	Cysteine desulfurase (EC 2.8.1.7)
	BSU29580	thiI	Thiamine biosynthesis protein ThiI
Position: -297 Score: 4.6 Sequence: AATTATTAGAAATTT Position: -214 Score: 4.3 Sequence: AACAATCAGAAAATT Locus tag: BSU11870 Name: metI Funciton: Cystathionine gamma-synthase (EC 2.5.1.48) Locus tag: BSU11880 Name: metC Funciton: Cystathionine beta-lyase (EC 4.4.1.8)
	BSU11870	metI	Cystathionine gamma-synthase (EC 2.5.1.48)
	BSU11880	metC	Cystathionine beta-lyase (EC 4.4.1.8)
Position: -25 Score: 4.1 Sequence: AGTTATCAGAATTTT Locus tag: BSU39340 Name: hutP Funciton: Hut operon positive regulatory protein Locus tag: BSU39350 Name: hutH Funciton: Histidine ammonia-lyase (EC 4.3.1.3) Locus tag: BSU39360 Name: hutU Funciton: Urocanate hydratase (EC 4.2.1.49) Locus tag: BSU39370 Name: hutI Funciton: Imidazolonepropionase (EC 3.5.2.7) Locus tag: BSU39380 Name: hutG Funciton: Formiminoglutamase (EC 3.5.3.8) Locus tag: BSU39390 Name: hutM Funciton: Histidine permease
	BSU39340	hutP	Hut operon positive regulatory protein
	BSU39350	hutH	Histidine ammonia-lyase (EC 4.3.1.3)
	BSU39360	hutU	Urocanate hydratase (EC 4.2.1.49)
	BSU39370	hutI	Imidazolonepropionase (EC 3.5.2.7)
	BSU39380	hutG	Formiminoglutamase (EC 3.5.3.8)
	BSU39390	hutM	Histidine permease
Position: -106 Score: 4.1 Sequence: AATAATCAGAATCTT Position: -89 Score: 4.5 Sequence: TATTTTGAGAATATT Locus tag: BSU03200 Name: putB Funciton: Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) Locus tag: BSU03210 Name: putC Funciton: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) Locus tag: BSU03220 Name: putP Funciton: Proline/sodium symporter (TC 2.A.21.2.1) Locus tag: BSU03230 Name: putR Funciton: Transcriptional regulator of proline utilization
	BSU03200	putB	Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase)
	BSU03210	putC	Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
	BSU03220	putP	Proline/sodium symporter (TC 2.A.21.2.1)
	BSU03230	putR	Transcriptional regulator of proline utilization
Position: -36 Score: 4.9 Sequence: TATTATCAGAAAATT Locus tag: BSU32090 Name: yuiA Funciton: Conserved hypothetical protein Locus tag: BSU32080 Name: yuiB Funciton: Hypothetical membrane protein Locus tag: BSU32070 Name: yuiC Funciton: Cell wall-binding protein
	BSU32090	yuiA	Conserved hypothetical protein
	BSU32080	yuiB	Hypothetical membrane protein
	BSU32070	yuiC	Cell wall-binding protein
Position: -221 Score: 4.7 Sequence: TATTTTCTTAATATT Locus tag: BSU40340 Name: rocD Funciton: Ornithine aminotransferase (EC 2.6.1.13) Locus tag: BSU40330 Name: rocE Funciton: Arginine permease RocE Locus tag: BSU40320 Name: rocF Funciton: Arginase (EC 3.5.3.1)
	BSU40340	rocD	Ornithine aminotransferase (EC 2.6.1.13)
	BSU40330	rocE	Arginine permease RocE
	BSU40320	rocF	Arginase (EC 3.5.3.1)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of CodY in Bacillus subtilis subsp. subtilis str. 168

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --