Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of CodY in Oceanobacillus iheyensis HTE831

Properties
Regulator type: Transcription factor
TF locus tag: OB1551
Regulator family: CodY
Regulation mode:
Biological process: Amino acid metabolism
Effector: Guanosine triphosphate; Branched-chain amino acids
Regulog: CodY - Bacillales
Statistics of regulated genes:
- Genes 50
- Operons 25
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 445 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -508
Score: 4.1
Sequence: AATAATTAAAAAACT
Locus tag: OB2623
Name: ilvB
Funciton: Acetolactate synthase large subunit (EC 2.2.1.6)
Locus tag: OB2622
Name: ilvH
Funciton: Acetolactate synthase small subunit (EC 2.2.1.6)
Locus tag: OB2621
Name: ilvC
Funciton: Ketol-acid reductoisomerase (EC 1.1.1.86)
Locus tag: OB2620
Name: leuA
Funciton: 2-isopropylmalate synthase (EC 2.3.3.13)
Locus tag: OB2619
Name: leuB
Funciton: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
Locus tag: OB2618
Name: leuC
Funciton: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Locus tag: OB2617
Name: leuD
Funciton: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
Locus tag: OB2616
Name: tdcB
Funciton: Threonine dehydratase (EC 4.3.1.19)
OB2623
ilvB
Acetolactate synthase large subunit (EC 2.2.1.6)
OB2622
ilvH
Acetolactate synthase small subunit (EC 2.2.1.6)
OB2621
ilvC
Ketol-acid reductoisomerase (EC 1.1.1.86)
OB2620
leuA
2-isopropylmalate synthase (EC 2.3.3.13)
OB2619
leuB
3-isopropylmalate dehydrogenase (EC 1.1.1.85)
OB2618
leuC
3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
OB2617
leuD
3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
OB2616
tdcB
Threonine dehydratase (EC 4.3.1.19)
Position: -36
Score: 4.9
Sequence: AATTTTCTGAAAAAA
Locus tag: OB0021
Name: gltO
Funciton: Proton/sodium-glutamate symport protein
OB0021
gltO
Proton/sodium-glutamate symport protein
Position: -101
Score: 4.4
Sequence: AATAATCAGAAAAAA
Locus tag: OB3129
Name: argG
Funciton: Argininosuccinate synthase (EC 6.3.4.5)
Locus tag: OB3128
Name: argH
Funciton: Argininosuccinate lyase (EC 4.3.2.1)
OB3129
argG
Argininosuccinate synthase (EC 6.3.4.5)
OB3128
argH
Argininosuccinate lyase (EC 4.3.2.1)
Position: -58
Score: 4.8
Sequence: AATTTTCAGTATATT
Locus tag: OB2453
Name: appD
Funciton: Oligopeptide transport ATP-binding protein (TC 3.A.1.5.1)
Locus tag: OB2452
Name: appF
Funciton: Oligopeptide transport ATP-binding protein (TC 3.A.1.5.1)
Locus tag: OB2451
Name: appA
Funciton: Oligopeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
OB2453
appD
Oligopeptide transport ATP-binding protein (TC 3.A.1.5.1)
OB2452
appF
Oligopeptide transport ATP-binding protein (TC 3.A.1.5.1)
OB2451
appA
Oligopeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
Position: -56
Score: 4.4
Sequence: TATTATCAGATTATT
Locus tag: OB0994
Name: yocS
Funciton: Sodium-dependent transporter
OB0994
yocS
Sodium-dependent transporter
Position: -113
Score: 4.6
Sequence: AATTTTCTAAAAACA
Locus tag: OB1212
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: OB1211
Name: amt
Funciton: Ammonium transporter
OB1212
glnB
Nitrogen regulatory protein P-II
OB1211
amt
Ammonium transporter
Position: -264
Score: 4.4
Sequence: AATAGTATGATAATT
Locus tag: OB3328
Name: gldA
Funciton: Glycerol dehydrogenase (EC 1.1.1.6)
OB3328
gldA
Glycerol dehydrogenase (EC 1.1.1.6)
Position: -67
Score: 4.4
Sequence: AAAATTCAAAAAATA
Locus tag: OB2122
Name: lcfA
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
OB2122
lcfA
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -222
Score: 4.3
Sequence: AAATATTAAAAAATT
Locus tag: OB2168
Name: citZ
Funciton: Citrate synthase (si) (EC 2.3.3.1)
Locus tag: OB2167
Name: icd
Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
Locus tag: OB2166
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
OB2168
citZ
Citrate synthase (si) (EC 2.3.3.1)
OB2167
icd
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
OB2166
mdh
Malate dehydrogenase (EC 1.1.1.37)
Position: -108
Score: 4.4
Sequence: ATTTTTCTGAAATAT
Locus tag: OB1004
Name: glnH
Funciton: Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)
Locus tag: OB1005
Name: glnP
Funciton: Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)
Locus tag: OB1006
Name: glnQ
Funciton: Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)
OB1004
glnH
Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)
OB1005
glnP
Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)
OB1006
glnQ
Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)
Position: -66
Score: 4.8
Sequence: ATTTTTAAGAAAATT
Locus tag: OB1787
Name: ndk
Funciton: Nucleoside diphosphate kinase (EC 2.7.4.6)
OB1787
ndk
Nucleoside diphosphate kinase (EC 2.7.4.6)
Position: -112
Score: 4.5
Sequence: TATTTTTACAAAATT
Locus tag: OB3067
Name: dppC
Funciton: Oligopeptide ABC transporter permease
Locus tag: OB3068
Name: dppB
Funciton: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)
Locus tag: OB3069
Name: oppD
Funciton: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
Locus tag: OB3070
Name: oppF
Funciton: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)
OB3067
dppC
Oligopeptide ABC transporter permease
OB3068
dppB
Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)
OB3069
oppD
Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
OB3070
oppF
Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)
Position: -89
Score: 4.4
Sequence: AATTTTTAGATAAAA
Locus tag: OB0438
Name: metA
Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46)
OB0438
metA
Homoserine O-succinyltransferase (EC 2.3.1.46)
Position: -94
Score: 4.5
Sequence: TTTATTCTAAAAATT
Locus tag: OB1177
Name: comK
Funciton: Competence transcription factor
OB1177
comK
Competence transcription factor
Position: -227
Score: 4.5
Sequence: AATATTCTGTTAATT
Locus tag: OB0266
Name: sspO
Funciton: Small, acid-soluble spore protein O
OB0266
sspO
Small, acid-soluble spore protein O
Position: -96
Score: 4.5
Sequence: AATATTCAGATTAAT
Position: -41
Score: 4.5
Sequence: AATTAATAGAAAATT
Locus tag: OB2971
Name: dppA
Funciton: D-aminopeptidase (EC 3.4.11.-)
Locus tag: OB2970
Name: dppB
Funciton: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)
Locus tag: OB2969
Name: dppC
Funciton: Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)
Locus tag: OB2968
Name: dppD
Funciton: Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)
Locus tag: OB2967
Name: dppE
Funciton: Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
OB2971
dppA
D-aminopeptidase (EC 3.4.11.-)
OB2970
dppB
Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)
OB2969
dppC
Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)
OB2968
dppD
Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)
OB2967
dppE
Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
Position: -121
Score: 5
Sequence: ATTTTTTTGAAAATT
Locus tag: OB2606
Name: lutR
Funciton: Transcriptional regulator of L-lactate utilization, GntR family
OB2606
lutR
Transcriptional regulator of L-lactate utilization, GntR family
Position: -85
Score: 4.6
Sequence: AAATTTCAAAAAATA
Locus tag: OB2221
Name: acuA
Funciton: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor
Locus tag: OB2222
Name: acuB
Funciton: Component of the acetoin degradation regulation pathway
Locus tag: OB2223
Name: acuC
Funciton: NAD-independent protein deacetylase AcuC
OB2221
acuA
Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor
OB2222
acuB
Component of the acetoin degradation regulation pathway
OB2223
acuC
NAD-independent protein deacetylase AcuC
Position: -40
Score: 4.5
Sequence: AATATAATGAAAATT
Locus tag: OB2833
Name: glpQ
Funciton: Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46)
OB2833
glpQ
Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46)
Position: -122
Score: 4.4
Sequence: AATTGAAAGAAAATT
Locus tag: OB0463
Name: oppA2
Funciton: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
OB0463
oppA2
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
Position: -186
Score: 4.8
Sequence: AATTTTCGGAATATT
Position: -87
Score: 4.7
Sequence: AATTTTTTAAAAAAT
Position: -86
Score: 4.5
Sequence: ATTTTTTAAAAAATA
Locus tag: OB3071
Name: oppA2
Funciton: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
OB3071
oppA2
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
Position: -202
Score: 4.6
Sequence: AAATTTCAAAAAATA
Locus tag: OB3099
Name: gltA
Funciton: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
Locus tag: OB3098
Name: gltB
Funciton: Glutamate synthase [NADPH] small chain (EC 1.4.1.13)
OB3099
gltA
Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
OB3098
gltB
Glutamate synthase [NADPH] small chain (EC 1.4.1.13)
Position: -49
Score: 4.5
Sequence: AATTGTTAGAATAAT
Locus tag: OB2303
Name: gltZ
Funciton: Proton/glutamate symport protein @ Sodium/glutamate symport protein
OB2303
gltZ
Proton/glutamate symport protein @ Sodium/glutamate symport protein
Position: -96
Score: 4.5
Sequence: TATAATCAGAATATT
Locus tag: OB2643
Name: ytcI
Funciton: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
OB2643
ytcI
Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Position: -58
Score: 4.3
Sequence: AATTATATGAATAAT
Locus tag: OB1157
Name: yhaA
Funciton: N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)
OB1157
yhaA
N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14)
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