Regulon of CodY in Anoxybacillus flavithermus WK1
| Regulator type: | Transcription factor |
| TF locus tag: | Aflv_1745 |
| Regulator family: | CodY |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Guanosine triphosphate; Branched-chain amino acids |
| Regulog: | CodY - Bacillales |
| Statistics of regulated genes: | |
| - Genes | 65 |
| - Operons | 38 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - CodY
- By effector - Guanosine triphosphate
- By effector - Branched-chain amino acids
- By pathway - Amino acid metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -140
Score: 4.9 Sequence: ATTTTTCTGACAATT
Locus tag: Aflv_1459
Name: gltO Funciton: Proton/sodium-glutamate symport protein |
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gltO
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Proton/sodium-glutamate symport protein
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Position: -77
Score: 5.1 Sequence: AATTTTTTAAAAATT
Locus tag: Aflv_0462
Name: acsA Funciton: Acetyl-coenzyme A synthetase (EC 6.2.1.1) |
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acsA
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Acetyl-coenzyme A synthetase (EC 6.2.1.1)
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Position: -117
Score: 4.6 Sequence: TATTTTCTGAATTTT
Position: -108
Score: 4.4 Sequence: AATTTTTTAATAAAT
Locus tag: Aflv_0983
Name: yqjP Funciton: Zinc metallohydrolase, metallo-beta-lactamase family (EC 3.5.2.6) |
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yqjP
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Zinc metallohydrolase, metallo-beta-lactamase family (EC 3.5.2.6)
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Position: -122
Score: 4.7 Sequence: TATTTTTATAAAATT
Locus tag: Aflv_2792
Name: glnH Funciton: Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)
Locus tag: Aflv_2791
Name: glnP Funciton: Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)
Locus tag: Aflv_2790
Name: glnQ Funciton: Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2) |
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glnH
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Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)
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glnP
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Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)
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glnQ
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Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)
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Position: -48
Score: 4.7 Sequence: AATTTTTTGAATTTT
Position: -26
Score: 4.5 Sequence: TATTTTTTTAATATT
Locus tag: Aflv_0356
Name: appD Funciton: Oligopeptide transport ATP-binding protein (TC 3.A.1.5.1)
Locus tag: Aflv_0357
Name: appF Funciton: Oligopeptide transport ATP-binding protein (TC 3.A.1.5.1)
Locus tag: Aflv_0358
Name: appA Funciton: Oligopeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
Locus tag: Aflv_0359
Name: appB Funciton: Oligopeptide transport system permease protein (TC 3.A.1.5.2)
Locus tag: Aflv_0360
Name: appC Funciton: Oligopeptide transport system permease protein (TC 3.A.1.5.2) |
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appD
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Oligopeptide transport ATP-binding protein (TC 3.A.1.5.1)
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appF
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Oligopeptide transport ATP-binding protein (TC 3.A.1.5.1)
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appA
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Oligopeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
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appB
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Oligopeptide transport system permease protein (TC 3.A.1.5.2)
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appC
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Oligopeptide transport system permease protein (TC 3.A.1.5.2)
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Position: -29
Score: 4.9 Sequence: AATTTTATGAAAATA
Locus tag: Aflv_2051
Name: azlC Funciton: Branched-chain amino acid permease (azaleucine resistance)
Locus tag: Aflv_2052
Name: azlD Funciton: Branched-chain amino acid transport protein |
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azlC
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Branched-chain amino acid permease (azaleucine resistance)
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azlD
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Branched-chain amino acid transport protein
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Position: -100
Score: 4.9 Sequence: AATTTTCAGAAAAAA
Locus tag: Aflv_1508
Name: glnR Funciton: Transcriptional regulator of nitrogen excess response, MerR family
Locus tag: Aflv_1507
Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2) |
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glnR
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Transcriptional regulator of nitrogen excess response, MerR family
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glnA
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Glutamine synthetase type I (EC 6.3.1.2)
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Position: -142
Score: 4.6 Sequence: AATTTTCTAACATTT
Locus tag: Aflv_2134
Name: null Funciton: Uncharacterized membrane protein |
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Uncharacterized membrane protein
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Position: -68
Score: 4.4 Sequence: AATTTTTTGAATTTA
Locus tag: Aflv_1145
Name: yppF Funciton: Hypothetical protein |
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yppF
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Hypothetical protein
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Position: -102
Score: 4.4 Sequence: AAAATACAGAAAATT
Locus tag: Aflv_1403
Name: glnA2 Funciton: Glutamine synthetase type I (EC 6.3.1.2) |
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glnA2
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Glutamine synthetase type I (EC 6.3.1.2)
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Position: -56
Score: 4.8 Sequence: AAATTTCAGAAAATA
Locus tag: Aflv_0564
Name: lcfA Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
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lcfA
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Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
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Position: -39
Score: 4.9 Sequence: AATTTTCAGAAAAAA
Locus tag: Aflv_1883
Name: ykzI Funciton: Hypothetical protein
Locus tag: Aflv_1882
Name: suhB Funciton: Inositol-1-monophosphatase (EC 3.1.3.25) |
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ykzI
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Hypothetical protein
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suhB
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Inositol-1-monophosphatase (EC 3.1.3.25)
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Position: -83
Score: 4.8 Sequence: AATTTTCGGAATATT
Locus tag: Aflv_2006
Name: kinE Funciton: Sporulation kinase E |
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kinE
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Sporulation kinase E
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Position: -51
Score: 5.3 Sequence: AATTTTCTAAAAATT
Locus tag: Aflv_1464
Name: metA Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46) |
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metA
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Homoserine O-succinyltransferase (EC 2.3.1.46)
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Position: -87
Score: 4.4 Sequence: ATTTATTAAAAAATT
Locus tag: Aflv_2290
Name: hpr Funciton: Transcriptional repressor of sporulation and extracellular protein, MarR family |
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hpr
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Transcriptional repressor of sporulation and extracellular protein, MarR family
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Position: -88
Score: 4.7 Sequence: TTTTTTTAGAAAATT
Locus tag: Aflv_2414
Name: hom Funciton: Homoserine dehydrogenase (EC 1.1.1.3)
Locus tag: Aflv_2413
Name: thrC Funciton: Threonine synthase (EC 4.2.3.1)
Locus tag: Aflv_2412
Name: thrB Funciton: Homoserine kinase (EC 2.7.1.39) |
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hom
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Homoserine dehydrogenase (EC 1.1.1.3)
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thrC
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Threonine synthase (EC 4.2.3.1)
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thrB
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Homoserine kinase (EC 2.7.1.39)
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Position: -136
Score: 4.8 Sequence: AATAATCAAAAAATT
Position: -79
Score: 4.7 Sequence: AATTTTCAAATAAAT
Locus tag: Aflv_0590
Name: dat Funciton: Branched-chain amino acid aminotransferase (EC 2.6.1.42) |
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dat
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Branched-chain amino acid aminotransferase (EC 2.6.1.42)
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Position: -25
Score: 4.9 Sequence: AAAATTCAGAAAATT
Locus tag: Aflv_1279
Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: Aflv_1280
Name: null Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: Aflv_1281
Name: Aflv_1281 Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3) |
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liuR
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Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
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Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
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Aflv_1281
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Acyl-CoA dehydrogenase (EC 1.3.99.3)
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Position: -120
Score: 4.6 Sequence: TATTTTATGAAAAAT
Locus tag: Aflv_0953
Name: spo0A Funciton: Stage 0 sporulation two-component response regulator (Spo0A) |
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spo0A
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Stage 0 sporulation two-component response regulator (Spo0A)
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Position: -113
Score: 5 Sequence: ATTTTTCAAAAAATT
Locus tag: Aflv_1525
Name: null Funciton: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3)
Locus tag: Aflv_1524
Name: null Funciton: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) |
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2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3)
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2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3)
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Position: -166
Score: 4.5 Sequence: ATTTTTTAAAATATT
Locus tag: Aflv_2428
Name: null Funciton: Sodium/proline symporter |
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Sodium/proline symporter
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Position: -102
Score: 4.6 Sequence: AAATGTTAGAAAATT
Locus tag: Aflv_2133
Name: oppA Funciton: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
Locus tag: Aflv_2132
Name: oppB Funciton: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
Locus tag: Aflv_2131
Name: oppC Funciton: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
Locus tag: Aflv_2130
Name: oppD Funciton: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
Locus tag: Aflv_2129
Name: oppF Funciton: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) |
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oppA
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Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
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oppB
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Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
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oppC
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Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
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oppD
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Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
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oppF
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Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)
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Position: -35
Score: 4.7 Sequence: TATTTTCCGAAAATT
Locus tag: Aflv_2073
Name: yjcG Funciton: RNA ligase/cyclic nucleotide phosphodiesterase
Locus tag: Aflv_2074
Name: yjcF Funciton: GNAT family acetyltransferase YjcF |
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yjcG
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RNA ligase/cyclic nucleotide phosphodiesterase
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yjcF
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GNAT family acetyltransferase YjcF
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Position: -99
Score: 5 Sequence: ATTTTTTAGAAAATT
Locus tag: Aflv_1453
Name: ilvA Funciton: Threonine dehydratase biosynthetic (EC 4.3.1.19) |
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ilvA
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Threonine dehydratase biosynthetic (EC 4.3.1.19)
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Position: -121
Score: 4.4 Sequence: AAATTTTTAAATATT
Locus tag: Aflv_2011
Name: lutP Funciton: L-lactate permease |
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lutP
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L-lactate permease
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Position: -60
Score: 4.4 Sequence: AATATTTAAAAATTT
Locus tag: Aflv_2010
Name: lutR Funciton: Transcriptional regulator of L-lactate utilization, GntR family |
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lutR
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Transcriptional regulator of L-lactate utilization, GntR family
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Position: -47
Score: 4.8 Sequence: AATTATCAGAAATTT
Locus tag: Aflv_1055
Name: serA Funciton: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) |
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serA
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D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
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Position: -101
Score: 5.1 Sequence: AATTTTTAAAAAATT
Locus tag: Aflv_0461
Name: acuA Funciton: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor
Locus tag: Aflv_0460
Name: acuB Funciton: Component of the acetoin degradation regulation pathway
Locus tag: Aflv_0459
Name: acuC Funciton: NAD-independent protein deacetylase AcuC |
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acuA
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Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor
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acuB
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Component of the acetoin degradation regulation pathway
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acuC
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NAD-independent protein deacetylase AcuC
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Position: -116
Score: 4.6 Sequence: ATTTTTCTGAAAAAA
Locus tag: Aflv_1527
Name: spoVS Funciton: Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS) |
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spoVS
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Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)
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Position: -209
Score: 4.3 Sequence: AAAAGTCTGATAATT
Locus tag: Aflv_0504
Name: citZ Funciton: Citrate synthase (si) (EC 2.3.3.1)
Locus tag: Aflv_0505
Name: icd Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
Locus tag: Aflv_0506
Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37) |
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citZ
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Citrate synthase (si) (EC 2.3.3.1)
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icd
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Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
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mdh
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Malate dehydrogenase (EC 1.1.1.37)
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Position: -238
Score: 4.7 Sequence: AATTTTCATATTATT
Locus tag: Aflv_0217
Name: bacD Funciton: Alanine-anticapsin ligase BacD |
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bacD
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Alanine-anticapsin ligase BacD
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Position: -32
Score: 4.7 Sequence: AATTGTGTGAAAATT
Locus tag: Aflv_2391
Name: alaR Funciton: Transcriptional regulator of alanine metabolism, Lrp/AsnC family
Locus tag: Aflv_2390
Name: alaT Funciton: Aspartate aminotransferase (EC 2.6.1.1) |
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alaR
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Transcriptional regulator of alanine metabolism, Lrp/AsnC family
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alaT
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Aspartate aminotransferase (EC 2.6.1.1)
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Position: -91
Score: 4.5 Sequence: TATTTTTTAAAAAAT
Position: -90
Score: 4.7 Sequence: ATTTTTTAAAAAATT
Locus tag: Aflv_2293
Name: serC Funciton: Phosphoserine aminotransferase (EC 2.6.1.52) |
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serC
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Phosphoserine aminotransferase (EC 2.6.1.52)
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Position: -122
Score: 4.6 Sequence: AATTTTCAAAAAACA
Locus tag: Aflv_0257
Name: adeC Funciton: Adenine deaminase (EC 3.5.4.2) |
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adeC
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Adenine deaminase (EC 3.5.4.2)
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Position: -92
Score: 4.4 Sequence: ATTTTTTAAAAAAAT
Locus tag: Aflv_0145
Name: pdaB Funciton: Probable polysaccharide deacetylase |
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pdaB
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Probable polysaccharide deacetylase
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Position: -50
Score: 4.3 Sequence: AATTTTGTTATAATT
Locus tag: Aflv_2607
Name: ushA Funciton: 5'-nucleotidase (EC 3.1.3.5) |
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ushA
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5'-nucleotidase (EC 3.1.3.5)
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Position: -228
Score: 4.4 Sequence: ATTTTTCGGAAAATA
Position: -200
Score: 4.6 Sequence: AAAAATCAGAAAATT
Locus tag: Aflv_2067
Name: metI Funciton: Cystathionine gamma-synthase (EC 2.5.1.48)
Locus tag: Aflv_2066
Name: metC Funciton: Cystathionine beta-lyase (EC 4.4.1.8) |
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metI
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Cystathionine gamma-synthase (EC 2.5.1.48)
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metC
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Cystathionine beta-lyase (EC 4.4.1.8)
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Position: -35
Score: 5.2 Sequence: AATTATCTGAAAATT
Locus tag: Aflv_2401
Name: yuiA Funciton: Conserved hypothetical protein
Locus tag: Aflv_2400
Name: yuiB Funciton: Hypothetical membrane protein
Locus tag: Aflv_2399
Name: yuiC Funciton: Cell wall-binding protein |
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yuiA
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Conserved hypothetical protein
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yuiB
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Hypothetical membrane protein
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yuiC
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Cell wall-binding protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |