Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of CodY in Bacillus cereus ATCC 14579

Properties
Regulator type: Transcription factor
TF locus tag: BC3826
Regulator family: CodY
Regulation mode:
Biological process: Amino acid metabolism
Effector: Guanosine triphosphate; Branched-chain amino acids
Regulog: CodY - Bacillales
Statistics of regulated genes:
- Genes 53
- Operons 35
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 445 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -218
Score: 4.5
Sequence: TAATATCTGAAAATT
Locus tag: BC3724
Name: gabP
Funciton: Gamma-aminobutyrate (GABA) permease
BC3724
gabP
Gamma-aminobutyrate (GABA) permease
Position: -88
Score: 4.6
Sequence: AAAATTCAGAAAATA
Locus tag: BC1389
Name: gltO
Funciton: Proton/sodium-glutamate symport protein
BC1389
gltO
Proton/sodium-glutamate symport protein
Position: -69
Score: 4.8
Sequence: AATATACTGAAAATT
Locus tag: BC4659
Name: acsA
Funciton: Acetyl-coenzyme A synthetase (EC 6.2.1.1)
BC4659
acsA
Acetyl-coenzyme A synthetase (EC 6.2.1.1)
Position: -95
Score: 4.6
Sequence: TTTTTTCTTAAAATT
Locus tag: BC0374
Name: amhX
Funciton: Amidohydrolase amhX (EC 3.5.1.-)
BC0374
amhX
Amidohydrolase amhX (EC 3.5.1.-)
Position: -108
Score: 4.4
Sequence: AATTGTTTGAAAAAA
Locus tag: BC4630
Name: argG
Funciton: Argininosuccinate synthase (EC 6.3.4.5)
Locus tag: BC4629
Name: argH
Funciton: Argininosuccinate lyase (EC 4.3.2.1)
BC4630
argG
Argininosuccinate synthase (EC 6.3.4.5)
BC4629
argH
Argininosuccinate lyase (EC 4.3.2.1)
Position: -121
Score: 4.6
Sequence: TATATTTTAAAAATT
Position: -102
Score: 4.6
Sequence: AATTTTTAAAATATA
Locus tag: BC0344
Name: putC
Funciton: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
BC0344
putC
Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
Position: -106
Score: 4.6
Sequence: ACATTTCTGAAAATT
Position: -76
Score: 4.6
Sequence: ATTTTTCAGAATAAT
Locus tag: BC1231
Name: putP
Funciton: Proline/sodium symporter (TC 2.A.21.2.1)
BC1231
putP
Proline/sodium symporter (TC 2.A.21.2.1)
Position: -124
Score: 4.9
Sequence: AATTTTATGAAAATA
Locus tag: BC5387
Name: pta
Funciton: Phosphate acetyltransferase (EC 2.3.1.8)
BC5387
pta
Phosphate acetyltransferase (EC 2.3.1.8)
Position: -83
Score: 5.3
Sequence: AATTTTCAAAAAATT
Locus tag: BC1178
Name: null
Funciton: Uncharacterized membrane protein
BC1178
Uncharacterized membrane protein
Position: -60
Score: 4.5
Sequence: AATATTATAATAATT
Locus tag: BC3482
Name: amyS
Funciton: Cytoplasmic alpha-amylase (EC 3.2.1.1)
BC3482
amyS
Cytoplasmic alpha-amylase (EC 3.2.1.1)
Position: -79
Score: 5.1
Sequence: AATTTTTAAAAAATT
Locus tag: BC1558
Name: yppF
Funciton: Hypothetical protein
BC1558
yppF
Hypothetical protein
Position: -277
Score: 4.4
Sequence: AAAAGTCAGAATATT
Locus tag: BC4526
Name: lcfA
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
BC4526
lcfA
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -60
Score: 4.8
Sequence: AATTTTAATAAAATT
Locus tag: BC0473
Name: rocR
Funciton: Transcriptional activator of arginine utilization, Fis family
BC0473
rocR
Transcriptional activator of arginine utilization, Fis family
Position: -74
Score: 4.6
Sequence: AAAAATCAGAAAATT
Locus tag: BC3959
Name: ykzI
Funciton: Hypothetical protein
Locus tag: BC3958
Name: suhB
Funciton: Inositol-1-monophosphatase (EC 3.1.3.25)
BC3959
ykzI
Hypothetical protein
BC3958
suhB
Inositol-1-monophosphatase (EC 3.1.3.25)
Position: -30
Score: 4.7
Sequence: AATTTTTAGACAATA
Locus tag: BC0012
Name: yaaC
Funciton: Conserved hypothetical protein
BC0012
yaaC
Conserved hypothetical protein
Position: -141
Score: 4.5
Sequence: TTATTTCAGAAAATT
Locus tag: BC5004
Name: fadN
Funciton: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
Locus tag: BC5003
Name: fadA
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: BC5002
Name: fadE
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
BC5004
fadN
Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
BC5003
fadA
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
BC5002
fadE
Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -142
Score: 4.5
Sequence: ATTTTTTAAAATATT
Locus tag: BC4910
Name: kapD
Funciton: KapD, inhibitor of KinA pathway to sporulation
BC4910
kapD
KapD, inhibitor of KinA pathway to sporulation
Position: -344
Score: 4.4
Sequence: AATTTTTTAATAAAT
Locus tag: BC4253
Name: metI
Funciton: Cystathionine gamma-synthase (EC 2.5.1.48)
Locus tag: BC4254
Name: metC
Funciton: Cystathionine beta-lyase (EC 4.4.1.8)
BC4253
metI
Cystathionine gamma-synthase (EC 2.5.1.48)
BC4254
metC
Cystathionine beta-lyase (EC 4.4.1.8)
Position: -167
Score: 4.4
Sequence: AATTTTTTGACTTTT
Position: -88
Score: 5.3
Sequence: AATTTTCTAAAAATT
Locus tag: BC1396
Name: dat
Funciton: Branched-chain amino acid aminotransferase (EC 2.6.1.42)
BC1396
dat
Branched-chain amino acid aminotransferase (EC 2.6.1.42)
Position: -84
Score: 4.7
Sequence: AATTTTCACACAATT
Locus tag: BC4170
Name: spo0A
Funciton: Stage 0 sporulation two-component response regulator (Spo0A)
BC4170
spo0A
Stage 0 sporulation two-component response regulator (Spo0A)
Position: -214
Score: 4.5
Sequence: AAAATTCAGAAAAAT
Locus tag: BC3774
Name: null
Funciton: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3)
Locus tag: BC3773
Name: null
Funciton: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3)
BC3774
2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3)
BC3773
2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3)
Position: -70
Score: 4.5
Sequence: AATTTATTGATAATT
Locus tag: BC4071
Name: null
Funciton: Sodium/proline symporter
BC4071
Sodium/proline symporter
Position: -87
Score: 5.1
Sequence: AATTTTTAAAAAATT
Locus tag: BC0053
Name: spoVG
Funciton: Stage V sporulation protein G required for spore cortex synthesis
BC0053
spoVG
Stage V sporulation protein G required for spore cortex synthesis
Position: -214
Score: 5.3
Sequence: AATTTTCTGAATATT
Locus tag: BC3644
Name: opuE
Funciton: Sodium/proline symporter
BC3644
opuE
Sodium/proline symporter
Position: -65
Score: 4.4
Sequence: TATTTTAAAAAAATA
Locus tag: BC1180
Name: oppB
Funciton: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
Locus tag: BC1181
Name: oppC
Funciton: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
Locus tag: BC1182
Name: oppD
Funciton: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
Locus tag: BC1183
Name: oppF
Funciton: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)
BC1180
oppB
Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
BC1181
oppC
Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
BC1182
oppD
Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
BC1183
oppF
Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)
Position: -165
Score: 4.5
Sequence: AATCTTTTAAAAATT
Position: -149
Score: 4.6
Sequence: AATTTTCTGATAAAA
Locus tag: BC1303
Name: lutA
Funciton: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit
Locus tag: BC1304
Name: lutB
Funciton: Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit
Locus tag: BC1305
Name: lutC
Funciton: Predicted L-lactate dehydrogenase, hypothetical protein subunit
BC1303
lutA
Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit
BC1304
lutB
Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit
BC1305
lutC
Predicted L-lactate dehydrogenase, hypothetical protein subunit
Position: -110
Score: 4.8
Sequence: AATTTTCAGTATATT
Locus tag: BC4660
Name: acuA
Funciton: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor
Locus tag: BC4661
Name: acuB
Funciton: Component of the acetoin degradation regulation pathway
Locus tag: BC4662
Name: acuC
Funciton: NAD-independent protein deacetylase AcuC
BC4660
acuA
Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor
BC4661
acuB
Component of the acetoin degradation regulation pathway
BC4662
acuC
NAD-independent protein deacetylase AcuC
Position: -238
Score: 4.6
Sequence: TATTTTCATAAAAAT
Locus tag: BC4343
Name: phoB
Funciton: Alkaline phosphatase (EC 3.1.3.1)
BC4343
phoB
Alkaline phosphatase (EC 3.1.3.1)
Position: -113
Score: 4.6
Sequence: ATTTTTTAGAAAAAT
Locus tag: BC3776
Name: spoVS
Funciton: Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)
BC3776
spoVS
Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)
Position: -80
Score: 4.7
Sequence: AAGTTTCTGAATATT
Position: -71
Score: 4.8
Sequence: AATATTTATAAAATT
Locus tag: BC1608
Name: ywcB
Funciton: Hypothetical Membrane Spanning Protein
Locus tag: BC1609
Name: ywcA
Funciton: SSS family solute:sodium (Na+) symporter
BC1608
ywcB
Hypothetical Membrane Spanning Protein
BC1609
ywcA
SSS family solute:sodium (Na+) symporter
Position: -90
Score: 4.3
Sequence: TTTTATCTGAAAATA
Locus tag: BC4133
Name: yqjP
Funciton: Zinc metallohydrolase, metallo-beta-lactamase family (EC 3.5.2.6)
BC4133
yqjP
Zinc metallohydrolase, metallo-beta-lactamase family (EC 3.5.2.6)
Position: -32
Score: 4.5
Sequence: AATATTATGTAAATT
Locus tag: BC2923
Name: null
Funciton: Acetyltransferase, GNAT family protein
BC2923
Acetyltransferase, GNAT family protein
Position: -231
Score: 4.4
Sequence: ATTTTTCTGTAAAAT
Locus tag: BC1252
Name: odhA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: BC1251
Name: odhB
Funciton: 2-oxoglutarate dehydrogenase E2 component
BC1252
odhA
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
BC1251
odhB
2-oxoglutarate dehydrogenase E2 component
Position: -58
Score: 4.7
Sequence: AATTAACTGAAAATT
Locus tag: BC4645
Name: ytcI
Funciton: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
BC4645
ytcI
Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Position: -36
Score: 4.8
Sequence: AATATTCAAATAATT
Locus tag: BC3653
Name: hutP
Funciton: Hut operon positive regulatory protein
Locus tag: BC3652
Name: hutH
Funciton: Histidine ammonia-lyase (EC 4.3.1.3)
Locus tag: BC3651
Name: hutU
Funciton: Urocanate hydratase (EC 4.2.1.49)
Locus tag: BC3650
Name: hutI
Funciton: Imidazolonepropionase (EC 3.5.2.7)
BC3653
hutP
Hut operon positive regulatory protein
BC3652
hutH
Histidine ammonia-lyase (EC 4.3.1.3)
BC3651
hutU
Urocanate hydratase (EC 4.2.1.49)
BC3650
hutI
Imidazolonepropionase (EC 3.5.2.7)
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