Regulon of CodY in Bacillus cereus ATCC 14579
| Regulator type: | Transcription factor |
| TF locus tag: | BC3826 |
| Regulator family: | CodY |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Guanosine triphosphate; Branched-chain amino acids |
| Regulog: | CodY - Bacillales |
| Statistics of regulated genes: | |
| - Genes | 53 |
| - Operons | 35 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - CodY
- By effector - Guanosine triphosphate
- By effector - Branched-chain amino acids
- By pathway - Amino acid metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -218
Score: 4.5 Sequence: TAATATCTGAAAATT
Locus tag: BC3724
Name: gabP Funciton: Gamma-aminobutyrate (GABA) permease |
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gabP
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Gamma-aminobutyrate (GABA) permease
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Position: -88
Score: 4.6 Sequence: AAAATTCAGAAAATA
Locus tag: BC1389
Name: gltO Funciton: Proton/sodium-glutamate symport protein |
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gltO
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Proton/sodium-glutamate symport protein
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Position: -69
Score: 4.8 Sequence: AATATACTGAAAATT
Locus tag: BC4659
Name: acsA Funciton: Acetyl-coenzyme A synthetase (EC 6.2.1.1) |
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acsA
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Acetyl-coenzyme A synthetase (EC 6.2.1.1)
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Position: -95
Score: 4.6 Sequence: TTTTTTCTTAAAATT
Locus tag: BC0374
Name: amhX Funciton: Amidohydrolase amhX (EC 3.5.1.-) |
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amhX
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Amidohydrolase amhX (EC 3.5.1.-)
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Position: -108
Score: 4.4 Sequence: AATTGTTTGAAAAAA
Locus tag: BC4630
Name: argG Funciton: Argininosuccinate synthase (EC 6.3.4.5)
Locus tag: BC4629
Name: argH Funciton: Argininosuccinate lyase (EC 4.3.2.1) |
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argG
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Argininosuccinate synthase (EC 6.3.4.5)
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argH
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Argininosuccinate lyase (EC 4.3.2.1)
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Position: -121
Score: 4.6 Sequence: TATATTTTAAAAATT
Position: -102
Score: 4.6 Sequence: AATTTTTAAAATATA
Locus tag: BC0344
Name: putC Funciton: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) |
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putC
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Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
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Position: -106
Score: 4.6 Sequence: ACATTTCTGAAAATT
Position: -76
Score: 4.6 Sequence: ATTTTTCAGAATAAT
Locus tag: BC1231
Name: putP Funciton: Proline/sodium symporter (TC 2.A.21.2.1) |
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putP
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Proline/sodium symporter (TC 2.A.21.2.1)
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Position: -124
Score: 4.9 Sequence: AATTTTATGAAAATA
Locus tag: BC5387
Name: pta Funciton: Phosphate acetyltransferase (EC 2.3.1.8) |
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pta
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Phosphate acetyltransferase (EC 2.3.1.8)
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Position: -83
Score: 5.3 Sequence: AATTTTCAAAAAATT
Locus tag: BC1178
Name: null Funciton: Uncharacterized membrane protein |
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Uncharacterized membrane protein
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Position: -60
Score: 4.5 Sequence: AATATTATAATAATT
Locus tag: BC3482
Name: amyS Funciton: Cytoplasmic alpha-amylase (EC 3.2.1.1) |
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amyS
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Cytoplasmic alpha-amylase (EC 3.2.1.1)
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Position: -79
Score: 5.1 Sequence: AATTTTTAAAAAATT
Locus tag: BC1558
Name: yppF Funciton: Hypothetical protein |
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yppF
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Hypothetical protein
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Position: -277
Score: 4.4 Sequence: AAAAGTCAGAATATT
Locus tag: BC4526
Name: lcfA Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
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lcfA
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Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
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Position: -60
Score: 4.8 Sequence: AATTTTAATAAAATT
Locus tag: BC0473
Name: rocR Funciton: Transcriptional activator of arginine utilization, Fis family |
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rocR
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Transcriptional activator of arginine utilization, Fis family
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Position: -74
Score: 4.6 Sequence: AAAAATCAGAAAATT
Locus tag: BC3959
Name: ykzI Funciton: Hypothetical protein
Locus tag: BC3958
Name: suhB Funciton: Inositol-1-monophosphatase (EC 3.1.3.25) |
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ykzI
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Hypothetical protein
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suhB
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Inositol-1-monophosphatase (EC 3.1.3.25)
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Position: -30
Score: 4.7 Sequence: AATTTTTAGACAATA
Locus tag: BC0012
Name: yaaC Funciton: Conserved hypothetical protein |
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yaaC
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Conserved hypothetical protein
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Position: -141
Score: 4.5 Sequence: TTATTTCAGAAAATT
Locus tag: BC5004
Name: fadN Funciton: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
Locus tag: BC5003
Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: BC5002
Name: fadE Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3) |
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fadN
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Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
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fadA
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3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
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fadE
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Acyl-CoA dehydrogenase (EC 1.3.99.3)
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Position: -142
Score: 4.5 Sequence: ATTTTTTAAAATATT
Locus tag: BC4910
Name: kapD Funciton: KapD, inhibitor of KinA pathway to sporulation |
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kapD
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KapD, inhibitor of KinA pathway to sporulation
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Position: -344
Score: 4.4 Sequence: AATTTTTTAATAAAT
Locus tag: BC4253
Name: metI Funciton: Cystathionine gamma-synthase (EC 2.5.1.48)
Locus tag: BC4254
Name: metC Funciton: Cystathionine beta-lyase (EC 4.4.1.8) |
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metI
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Cystathionine gamma-synthase (EC 2.5.1.48)
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metC
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Cystathionine beta-lyase (EC 4.4.1.8)
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Position: -167
Score: 4.4 Sequence: AATTTTTTGACTTTT
Position: -88
Score: 5.3 Sequence: AATTTTCTAAAAATT
Locus tag: BC1396
Name: dat Funciton: Branched-chain amino acid aminotransferase (EC 2.6.1.42) |
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dat
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Branched-chain amino acid aminotransferase (EC 2.6.1.42)
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Position: -84
Score: 4.7 Sequence: AATTTTCACACAATT
Locus tag: BC4170
Name: spo0A Funciton: Stage 0 sporulation two-component response regulator (Spo0A) |
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spo0A
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Stage 0 sporulation two-component response regulator (Spo0A)
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Position: -214
Score: 4.5 Sequence: AAAATTCAGAAAAAT
Locus tag: BC3774
Name: null Funciton: 2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3)
Locus tag: BC3773
Name: null Funciton: 2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) |
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2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3)
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2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3)
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Position: -70
Score: 4.5 Sequence: AATTTATTGATAATT
Locus tag: BC4071
Name: null Funciton: Sodium/proline symporter |
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Sodium/proline symporter
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Position: -87
Score: 5.1 Sequence: AATTTTTAAAAAATT
Locus tag: BC0053
Name: spoVG Funciton: Stage V sporulation protein G required for spore cortex synthesis |
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spoVG
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Stage V sporulation protein G required for spore cortex synthesis
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Position: -214
Score: 5.3 Sequence: AATTTTCTGAATATT
Locus tag: BC3644
Name: opuE Funciton: Sodium/proline symporter |
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opuE
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Sodium/proline symporter
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Position: -65
Score: 4.4 Sequence: TATTTTAAAAAAATA
Locus tag: BC1180
Name: oppB Funciton: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
Locus tag: BC1181
Name: oppC Funciton: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
Locus tag: BC1182
Name: oppD Funciton: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
Locus tag: BC1183
Name: oppF Funciton: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) |
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oppB
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Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
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oppC
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Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
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oppD
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Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
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oppF
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Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)
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Position: -165
Score: 4.5 Sequence: AATCTTTTAAAAATT
Position: -149
Score: 4.6 Sequence: AATTTTCTGATAAAA
Locus tag: BC1303
Name: lutA Funciton: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit
Locus tag: BC1304
Name: lutB Funciton: Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit
Locus tag: BC1305
Name: lutC Funciton: Predicted L-lactate dehydrogenase, hypothetical protein subunit |
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lutA
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Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit
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lutB
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Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit
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lutC
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Predicted L-lactate dehydrogenase, hypothetical protein subunit
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Position: -110
Score: 4.8 Sequence: AATTTTCAGTATATT
Locus tag: BC4660
Name: acuA Funciton: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor
Locus tag: BC4661
Name: acuB Funciton: Component of the acetoin degradation regulation pathway
Locus tag: BC4662
Name: acuC Funciton: NAD-independent protein deacetylase AcuC |
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acuA
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Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor
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acuB
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Component of the acetoin degradation regulation pathway
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acuC
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NAD-independent protein deacetylase AcuC
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Position: -238
Score: 4.6 Sequence: TATTTTCATAAAAAT
Locus tag: BC4343
Name: phoB Funciton: Alkaline phosphatase (EC 3.1.3.1) |
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phoB
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Alkaline phosphatase (EC 3.1.3.1)
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Position: -113
Score: 4.6 Sequence: ATTTTTTAGAAAAAT
Locus tag: BC3776
Name: spoVS Funciton: Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS) |
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spoVS
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Stage V sporulation protein required for dehydratation of the spore core and assembly of the coat (SpoVS)
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Position: -80
Score: 4.7 Sequence: AAGTTTCTGAATATT
Position: -71
Score: 4.8 Sequence: AATATTTATAAAATT
Locus tag: BC1608
Name: ywcB Funciton: Hypothetical Membrane Spanning Protein
Locus tag: BC1609
Name: ywcA Funciton: SSS family solute:sodium (Na+) symporter |
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ywcB
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Hypothetical Membrane Spanning Protein
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ywcA
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SSS family solute:sodium (Na+) symporter
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Position: -90
Score: 4.3 Sequence: TTTTATCTGAAAATA
Locus tag: BC4133
Name: yqjP Funciton: Zinc metallohydrolase, metallo-beta-lactamase family (EC 3.5.2.6) |
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yqjP
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Zinc metallohydrolase, metallo-beta-lactamase family (EC 3.5.2.6)
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Position: -32
Score: 4.5 Sequence: AATATTATGTAAATT
Locus tag: BC2923
Name: null Funciton: Acetyltransferase, GNAT family protein |
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Acetyltransferase, GNAT family protein
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Position: -231
Score: 4.4 Sequence: ATTTTTCTGTAAAAT
Locus tag: BC1252
Name: odhA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: BC1251
Name: odhB Funciton: 2-oxoglutarate dehydrogenase E2 component |
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odhA
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2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
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odhB
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2-oxoglutarate dehydrogenase E2 component
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Position: -58
Score: 4.7 Sequence: AATTAACTGAAAATT
Locus tag: BC4645
Name: ytcI Funciton: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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ytcI
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Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
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Position: -36
Score: 4.8 Sequence: AATATTCAAATAATT
Locus tag: BC3653
Name: hutP Funciton: Hut operon positive regulatory protein
Locus tag: BC3652
Name: hutH Funciton: Histidine ammonia-lyase (EC 4.3.1.3)
Locus tag: BC3651
Name: hutU Funciton: Urocanate hydratase (EC 4.2.1.49)
Locus tag: BC3650
Name: hutI Funciton: Imidazolonepropionase (EC 3.5.2.7) |
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hutP
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Hut operon positive regulatory protein
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hutH
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Histidine ammonia-lyase (EC 4.3.1.3)
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hutU
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Urocanate hydratase (EC 4.2.1.49)
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hutI
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Imidazolonepropionase (EC 3.5.2.7)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |