Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of CodY in Geobacillus kaustophilus HTA426

Properties
Regulator type: Transcription factor
TF locus tag: GK1215
Regulator family: CodY
Regulation mode:
Biological process: Amino acid metabolism
Effector: Guanosine triphosphate; Branched-chain amino acids
Regulog: CodY - Bacillales
Statistics of regulated genes:
- Genes 34
- Operons 16
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 445 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -102
Score: 4.4
Sequence: AAATTTCAAAAAAGT
Position: -77
Score: 4.9
Sequence: AATATTTTAAAAATT
Locus tag: GK2806
Name: acsA
Funciton: Acetyl-coenzyme A synthetase (EC 6.2.1.1)
GK2806
acsA
Acetyl-coenzyme A synthetase (EC 6.2.1.1)
Position: -158
Score: 4.8
Sequence: AATTTACAGAATATT
Locus tag: GK3452
Name: putP
Funciton: Proline/sodium symporter (TC 2.A.21.2.1)
GK3452
putP
Proline/sodium symporter (TC 2.A.21.2.1)
Position: -264
Score: 4.8
Sequence: AATATTCTGTAAATT
Locus tag: GK3453
Name: glnH
Funciton: Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)
Locus tag: GK3454
Name: glnP
Funciton: Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)
Locus tag: GK3455
Name: glnQ
Funciton: Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)
GK3453
glnH
Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2)
GK3454
glnP
Glutamine transport system permease protein GlnP (TC 3.A.1.3.2)
GK3455
glnQ
Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)
Position: -51
Score: 4.7
Sequence: AATTTTTAGACAATA
Locus tag: GK0673
Name: azlC
Funciton: Branched-chain amino acid permease (azaleucine resistance)
Locus tag: GK0674
Name: azlD
Funciton: Branched-chain amino acid transport protein
GK0673
azlC
Branched-chain amino acid permease (azaleucine resistance)
GK0674
azlD
Branched-chain amino acid transport protein
Position: -36
Score: 4.7
Sequence: AAAATTCAGAATATT
Locus tag: GK1490
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: GK1491
Name: null
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: GK1492
Name: GK1492
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: GK1495
Name: yuxK
Funciton: Possible thiol-disulphide dehydrogenase
GK1490
liuR
Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
GK1491
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
GK1492
GK1492
Acyl-CoA dehydrogenase (EC 1.3.99.3)
GK1495
yuxK
Possible thiol-disulphide dehydrogenase
Position: -96
Score: 4.7
Sequence: TATTTTTTGAAAAAT
Locus tag: GK2387
Name: spo0A
Funciton: Stage 0 sporulation two-component response regulator (Spo0A)
GK2387
spo0A
Stage 0 sporulation two-component response regulator (Spo0A)
Position: -96
Score: 4.6
Sequence: AATTTATAAAAAATT
Locus tag: GK0042
Name: spoVG
Funciton: Stage V sporulation protein G required for spore cortex synthesis
GK0042
spoVG
Stage V sporulation protein G required for spore cortex synthesis
Position: -172
Score: 4.5
Sequence: AATTTTTTTAAATTT
Locus tag: GK0865
Name: ycjH
Funciton: Putative acetyl esterase YjcH (EC 3.1.1.-)
Locus tag: GK0864
Name: yjcG
Funciton: RNA ligase/cyclic nucleotide phosphodiesterase
Locus tag: GK0863
Name: yjcF
Funciton: GNAT family acetyltransferase YjcF
GK0865
ycjH
Putative acetyl esterase YjcH (EC 3.1.1.-)
GK0864
yjcG
RNA ligase/cyclic nucleotide phosphodiesterase
GK0863
yjcF
GNAT family acetyltransferase YjcF
Position: -86
Score: 4.8
Sequence: AATTATCAGAAATTT
Locus tag: GK2247
Name: serA
Funciton: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
GK2247
serA
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
Position: -112
Score: 4.9
Sequence: AATTTTTAAAATATT
Position: -87
Score: 4.4
Sequence: ACTTTTTTGAAATTT
Locus tag: GK2807
Name: acuA
Funciton: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor
Locus tag: GK2808
Name: acuB
Funciton: Component of the acetoin degradation regulation pathway
Locus tag: GK2809
Name: acuC
Funciton: NAD-independent protein deacetylase AcuC
GK2807
acuA
Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor
GK2808
acuB
Component of the acetoin degradation regulation pathway
GK2809
acuC
NAD-independent protein deacetylase AcuC
Position: -201
Score: 4.3
Sequence: AAAAGTCTGATAATT
Locus tag: GK2736
Name: citZ
Funciton: Citrate synthase (si) (EC 2.3.3.1)
Locus tag: GK2735
Name: icd
Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
Locus tag: GK2734
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
GK2736
citZ
Citrate synthase (si) (EC 2.3.3.1)
GK2735
icd
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
GK2734
mdh
Malate dehydrogenase (EC 1.1.1.37)
Position: -130
Score: 4.5
Sequence: ATTTTTCAGATAAAT
Locus tag: GK0929
Name: ywcB
Funciton: Hypothetical Membrane Spanning Protein
Locus tag: GK0928
Name: ywcA
Funciton: SSS family solute:sodium (Na+) symporter
GK0929
ywcB
Hypothetical Membrane Spanning Protein
GK0928
ywcA
SSS family solute:sodium (Na+) symporter
Position: -118
Score: 4.4
Sequence: TTTTTTCTTAATATT
Position: -68
Score: 4.4
Sequence: ATTTTTTTGACAATA
Locus tag: GK2020
Name: yclF
Funciton: POT family proton (H+)-dependent oligopeptide transporter
GK2020
yclF
POT family proton (H+)-dependent oligopeptide transporter
Position: -341
Score: 4.5
Sequence: AAATTTAAAAAAATT
Locus tag: GK0866
Name: metI
Funciton: Cystathionine gamma-synthase (EC 2.5.1.48)
Locus tag: GK0867
Name: metC
Funciton: Cystathionine beta-lyase (EC 4.4.1.8)
GK0866
metI
Cystathionine gamma-synthase (EC 2.5.1.48)
GK0867
metC
Cystathionine beta-lyase (EC 4.4.1.8)
Position: -102
Score: 4.3
Sequence: AAAATTCAAAAAAAT
Locus tag: GK1367
Name: hutU
Funciton: Urocanate hydratase (EC 4.2.1.49)
Locus tag: GK1368
Name: hutI
Funciton: Imidazolonepropionase (EC 3.5.2.7)
Locus tag: GK1369
Name: null
Funciton: Predicted histidine uptake transporter
GK1367
hutU
Urocanate hydratase (EC 4.2.1.49)
GK1368
hutI
Imidazolonepropionase (EC 3.5.2.7)
GK1369
Predicted histidine uptake transporter
Position: -54
Score: 4.4
Sequence: TTTTTACAGAAAATT
Locus tag: GK2951
Name: yuiA
Funciton: Conserved hypothetical protein
Locus tag: GK2950
Name: yuiB
Funciton: Hypothetical membrane protein
Locus tag: GK2949
Name: yuiC
Funciton: Cell wall-binding protein
GK2951
yuiA
Conserved hypothetical protein
GK2950
yuiB
Hypothetical membrane protein
GK2949
yuiC
Cell wall-binding protein
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