Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of CodY in Bacillus clausii KSM-K16

Properties
Regulator type: Transcription factor
TF locus tag: ABC2273
Regulator family: CodY
Regulation mode:
Biological process: Amino acid metabolism
Effector: Guanosine triphosphate; Branched-chain amino acids
Regulog: CodY - Bacillales
Statistics of regulated genes:
- Genes 12
- Operons 8
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 445 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -77
Score: 4.3
Sequence: AATTTTTAATAAAAT
Locus tag: ABC3908
Name: gltO
Funciton: Proton/sodium-glutamate symport protein
ABC3908
gltO
Proton/sodium-glutamate symport protein
Position: -208
Score: 4.5
Sequence: AATTTTCGAAAAATA
Locus tag: ABC0645
Name: gamR
Funciton: Predicted transcriptional regulator of glucosamine utilization, GntR family
ABC0645
gamR
Predicted transcriptional regulator of glucosamine utilization, GntR family
Position: -117
Score: 4.5
Sequence: TATTTTTCGAAAATT
Locus tag: ABC0646
Name: chi
Funciton: Chitinase (EC 3.2.1.14)
ABC0646
chi
Chitinase (EC 3.2.1.14)
Position: -122
Score: 4.7
Sequence: TATTATCTGAATATT
Locus tag: ABC3940
Name: glnA2
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
ABC3940
glnA2
Glutamine synthetase type I (EC 6.3.1.2)
Position: -191
Score: 4.5
Sequence: AAATTTAAAAAAATT
Locus tag: ABC3806
Name: null
Funciton: Hypothetical protein
ABC3806
Hypothetical protein
Position: -101
Score: 4.6
Sequence: TTTTTTCAGAAAATA
Locus tag: ABC1961
Name: null
Funciton: Sodium/proline symporter
ABC1961
Sodium/proline symporter
Position: -245
Score: 4.5
Sequence: TATTTTTGGAAAATT
Position: -55
Score: 4.5
Sequence: AATAATTTTAAAATT
Locus tag: ABC3661
Name: oppA
Funciton: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
Locus tag: ABC3660
Name: oppB
Funciton: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
Locus tag: ABC3659
Name: oppC
Funciton: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
Locus tag: ABC3658
Name: appD
Funciton: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
Locus tag: ABC3657
Name: oppF
Funciton: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)
ABC3661
oppA
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
ABC3660
oppB
Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
ABC3659
oppC
Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
ABC3658
appD
Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
ABC3657
oppF
Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)
Position: -175
Score: 4.3
Sequence: CTTTTTTAGAAAATT
Locus tag: ABC3255
Name: ytcI
Funciton: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
ABC3255
ytcI
Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
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