Regulons of Desulfovibrio salexigens DSM 2638
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| TF |
ArsR |
Arsenate |
Arsenic resistance |
4 |
6 |
| TF |
ArsR2 |
|
Arsenic resistance |
2 |
2 |
| TF |
CooA |
|
Carbon monoxide utilization |
1 |
1 |
| TF |
DVU0030 |
|
Amino acid transport |
2 |
4 |
| TF |
DVU0057 |
|
|
1 |
1 |
| TF |
DVU0309 |
|
|
3 |
4 |
| TF |
DVU0379 |
|
Uranium reduction |
1 |
1 |
| TF |
DVU0525 |
|
Multidrug resistance |
1 |
3 |
| TF |
DVU0539/DVU0946 |
|
|
2 |
2 |
| TF |
DVU0569 |
|
Amino acid metabolism |
1 |
3 |
| TF |
DVU0619 |
|
|
1 |
3 |
| TF |
DVU1063 |
|
Motility |
10 |
14 |
| TF |
DVU1419 |
|
|
2 |
2 |
| TF |
DVU1964/DVU1967 |
|
|
2 |
5 |
| TF |
DVU2106 |
|
Nitrogen fixation |
2 |
2 |
| TF |
DVU2275 |
|
Pyruvate metabolism |
1 |
3 |
| TF |
DVU2394 |
|
Energy metabolism |
4 |
1 |
| TF |
DVU2644 |
|
Amino acid metabolism |
3 |
3 |
| TF |
DVU2802 |
|
|
1 |
3 |
| TF |
DVU2894 |
|
Motility |
7 |
2 |
| TF |
DVU2934 |
|
|
1 |
3 |
| TF |
DVU3305 |
|
|
4 |
2 |
| TF |
DVUA0057 |
|
Biofilm formation |
1 |
1 |
| TF |
DVUA0143 |
|
Nitrogen fixation |
2 |
4 |
| TF |
Dbac_0104 |
|
Metabolite transport |
1 |
2 |
| TF |
Dde_1200 |
|
|
1 |
1 |
| TF |
Desal_0038 |
|
Carbohydrate metabolism |
1 |
1 |
| TF |
Desal_0494 |
|
|
2 |
2 |
| TF |
Desal_2066 |
|
|
3 |
2 |
| TF |
Desal_2919 |
|
Hypothetical ABC transporter |
2 |
2 |
| TF |
Desal_3745 |
|
Metabolite transport |
2 |
2 |
| TF |
FliA |
|
Motility |
15 |
5 |
| TF |
Fur |
Iron ion, (Fe2+) |
Iron homeostasis |
23 |
41 |
| TF |
GalR |
Galactose |
Galactose utilization |
2 |
3 |
| TF |
HcpR |
Nitric oxide |
Nitrosative stress response |
5 |
5 |
| TF |
HmcR |
|
Energy metabolism |
1 |
3 |
| TF |
HrsM |
|
|
6 |
3 |
| TF |
LldR |
L-lactate |
Lactate utilization |
1 |
2 |
| TF |
ModE2 |
Molybdenum |
Molybdopterin biosynthesis; Molybdenum homeostasis |
10 |
11 |
| TF |
NifA-1 |
|
Nitrogen assimilation |
12 |
23 |
| TF |
NikR |
Nickel ion, (Ni2+) |
Nickel homeostasis |
5 |
1 |
| TF |
OhcR |
|
Energy metabolism |
1 |
1 |
| TF |
PerR |
|
Peroxide stress response |
3 |
3 |
| TF |
PhoB |
Inorganic phosphate |
Phosphate metabolism |
14 |
12 |
| TF |
RbsR |
Ribose |
Ribose utilization |
1 |
1 |
| TF |
Rex |
NADH |
Energy metabolism |
17 |
14 |
| TF |
RpoH |
Heat shock |
Heat shock response |
6 |
1 |
| TF |
RpoN |
|
Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism |
74 |
53 |
| TF |
SahR |
S-adenosylhomocysteine |
Methionine metabolism |
5 |
4 |
| TF |
SmtB |
|
Heavy metal resistance |
1 |
1 |
| TF |
TunR |
Molybdate; Tungsten |
Tungsten homeostasis; Molybdenum homeostasis |
5 |
1 |
| TF |
Zur |
Zinc ion, (Zn2+) |
Zinc homeostasis |
3 |
1 |
| RNA |
Cobalamin |
Adenosylcobalamin |
Cobalamin biosynthesis |
8 |
4 |
| RNA |
FMN |
Flavin mononucleotide |
Riboflavin biosynthesis |
1 |
1 |
| RNA |
SAM |
S-adenosylmethionine |
Methionine biosynthesis |
1 |
1 |
| RNA |
TPP |
Thiamine pyrophosphate |
Thiamine biosynthesis |
2 |
1 |
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