Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Fur in Desulfovibrio salexigens DSM 2638

Properties
Regulator type: Transcription factor
TF locus tag: Desal_0460, Desal_3797, Desal_0108
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Regulog: Fur - Desulfovibrionales
Statistics of regulated genes:
- Genes 35
- Operons 20
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 193 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -123
Score: 4.5
Sequence: ATGCAATTGAAATTCAC
Position: -117
Score: 5.2
Sequence: TTGAAATTCACAATCAA
Locus tag: Desal_2081
Name: null
Funciton: hypothetical protein
Locus tag: Desal_2082
Name: null
Funciton: MotA/TolQ/ExbB proton channel
Locus tag: Desal_2083
Name: null
Funciton: MotA/TolQ/ExbB proton channel
Locus tag: Desal_2084
Name: null
Funciton: Biopolymer transport protein ExbD/TolR
Locus tag: Desal_2085
Name: null
Funciton: TonB family protein
Locus tag: Desal_2086
Name: null
Funciton: Tetratricopeptide domain protein
Desal_2081
hypothetical protein
Desal_2082
MotA/TolQ/ExbB proton channel
Desal_2083
MotA/TolQ/ExbB proton channel
Desal_2084
Biopolymer transport protein ExbD/TolR
Desal_2085
TonB family protein
Desal_2086
Tetratricopeptide domain protein
Position: -82
Score: 4.9
Sequence: TTGATATTGACTTTGAA
Position: -76
Score: 5.3
Sequence: TTGACTTTGAATTTCAC
Position: -70
Score: 4.7
Sequence: TTGAATTTCACTCTCAC
Locus tag: Desal_0805
Name: fld
Funciton: Flavodoxin, iron-repressed
Desal_0805
fld
Flavodoxin, iron-repressed
Position: -22
Score: 4.7
Sequence: CTGACTTTAAATTTCAA
Locus tag: Desal_2172
Name: feoA
Funciton: ferrous iron transporter component feoA
Desal_2172
feoA
ferrous iron transporter component feoA
Position: -76
Score: 5.1
Sequence: TTGACAATCATTTTCGA
Locus tag: Desal_1904
Name: hdd
Funciton: GAF domain/HD domain protein
Desal_1904
hdd
GAF domain/HD domain protein
Position: -234
Score: 4.7
Sequence: ATGAATTTCGAAATCAA
Position: -128
Score: 4.9
Sequence: TTGATATTGACATTCGT
Position: -122
Score: 5.2
Sequence: TTGACATTCGTTTTCAT
Locus tag: Desal_0110
Name: gdp
Funciton: diguanylate cyclase
Desal_0110
gdp
diguanylate cyclase
Position: -61
Score: 4.9
Sequence: TTGACACTGAAAATCAT
Position: -55
Score: 5.1
Sequence: CTGAAAATCATTTTCAC
Locus tag: Desal_3096
Name: null
Funciton: hypothetical protein
Desal_3096
hypothetical protein
Position: -124
Score: 5.3
Sequence: TTGAGATTGACTTTCAA
Position: -51
Score: 4.9
Sequence: TTGAAAATGCTATTCAT
Position: -45
Score: 4.9
Sequence: ATGCTATTCATATTCAT
Locus tag: Desal_1569
Name: feoA
Funciton: ferrous iron transport protein A
Locus tag: Desal_1570
Name: feoB
Funciton: ferrous iron transport protein B
Desal_1569
feoA
ferrous iron transport protein A
Desal_1570
feoB
ferrous iron transport protein B
Position: -98
Score: 4.6
Sequence: TTGAATTCGATTTTGAT
Position: -74
Score: 4.6
Sequence: TTGATTTTGAAGTTTAT
Locus tag: Desal_3268
Name: null
Funciton: 2,5-didehydrogluconate reductase
Desal_3268
2,5-didehydrogluconate reductase
Position: -51
Score: 4.7
Sequence: TTGACCATGAATATCAA
Position: -45
Score: 5.1
Sequence: ATGAATATCAAAATCAA
Locus tag: Desal_1878
Name: null
Funciton: TonB-dependent receptor
Locus tag: Desal_1877
Name: null
Funciton: Methyltransferase type 12
Locus tag: Desal_1876
Name: null
Funciton: ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein
Locus tag: Desal_1875
Name: null
Funciton: binding-protein-dependent transport systems inner membrane component
Desal_1878
TonB-dependent receptor
Desal_1877
Methyltransferase type 12
Desal_1876
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein
Desal_1875
binding-protein-dependent transport systems inner membrane component
Position: -129
Score: 5.2
Sequence: TTGAAAATTAATTTCAT
Position: -123
Score: 4.6
Sequence: ATTAATTTCATTTTCTT
Position: -67
Score: 5.7
Sequence: TTGACATTGATTTTCAA
Locus tag: Desal_1504
Name: null
Funciton: ferrous ion transport protein A
Locus tag: Desal_1503
Name: null
Funciton: ferrous iron transport protein B
Desal_1504
ferrous ion transport protein A
Desal_1503
ferrous iron transport protein B
Position: 0
Score: 5.1
Sequence: ATGAAAATGGATTTCAT
Position: 6
Score: 4.6
Sequence: ATGGATTTCATTTTCGA
Locus tag: Desal_0460
Name: null
Funciton: ferric uptake regulator, Fur family
Desal_0460
ferric uptake regulator, Fur family
Position: -65
Score: 5.3
Sequence: TTGAAATTGAAATTCTT
Position: -59
Score: 5.4
Sequence: TTGAAATTCTTTTTCAT
Locus tag: Desal_0451
Name: null
Funciton: TonB-dependent receptor
Desal_0451
TonB-dependent receptor
Position: -117
Score: 4.5
Sequence: TTGAGTTTCAATTGCAG
Position: -68
Score: 5.2
Sequence: TTGACAATGATTATCAC
Locus tag: Desal_0108
Name: fur
Funciton: Ferric uptake regulator, Fur family
Desal_0108
fur
Ferric uptake regulator, Fur family
Position: -164
Score: 4.6
Sequence: ATGAAAACGAATGTCAA
Position: -52
Score: 4.9
Sequence: TTGATTTCGAAATTCAT
Locus tag: Desal_0111
Name: feoA
Funciton: FeoA family protein
Locus tag: Desal_0112
Name: feoB
Funciton: ferrous iron transport protein B
Locus tag: Desal_0113
Name: null
Funciton: hypothetical protein
Locus tag: Desal_0114
Name: null
Funciton: hypothetical protein
Desal_0111
feoA
FeoA family protein
Desal_0112
feoB
ferrous iron transport protein B
Desal_0113
hypothetical protein
Desal_0114
hypothetical protein
Position: -74
Score: 4
Sequence: TTGACATCGGTCTTCAA
Locus tag: Desal_3797
Name: fur
Funciton: Ferric uptake regulator, Fur family
Desal_3797
fur
Ferric uptake regulator, Fur family
Position: -223
Score: 4.8
Sequence: TTTAAATTCAAAATCAA
Position: -217
Score: 3.8
Sequence: TTCAAAATCAATATTTA
Position: -136
Score: 4.4
Sequence: ATCATAATCTTTATCAT
Locus tag: Desal_0032
Name: pep
Funciton: metalloprotease, iron-related
Desal_0032
pep
metalloprotease, iron-related
Position: -191
Score: 4
Sequence: AAGATTTTCACTGTCAC
Position: -68
Score: 4.4
Sequence: TTGATTCTTAATATCAA
Locus tag: Desal_0634
Name: copA
Funciton: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4)
Desal_0634
copA
Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4)
Position: -77
Score: 4.5
Sequence: TCGAAAATCGTTTTCAA
Locus tag: Desal_2558
Name: null
Funciton: ATPase associated with various cellular activities AAA_3
Locus tag: Desal_2559
Name: null
Funciton: hypothetical protein
Locus tag: Desal_2560
Name: null
Funciton: hypothetical protein
Desal_2558
ATPase associated with various cellular activities AAA_3
Desal_2559
hypothetical protein
Desal_2560
hypothetical protein
Position: -131
Score: 3.9
Sequence: TTGAGAATAATTAGCAG
Locus tag: Desal_1558
Name: null
Funciton: mercuric transport protein periplasmic component
Desal_1558
mercuric transport protein periplasmic component
Position: -71
Score: 5.2
Sequence: CTGATATTGACTTTCAA
Position: -65
Score: 4.4
Sequence: TTGACTTTCAATCTCTG
Position: -29
Score: 3.5
Sequence: ATTAATATCAAAATAAC
Locus tag: Desal_1879
Name: null
Funciton: transcriptional regulator, AraC family
Desal_1879
transcriptional regulator, AraC family
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