Regulog Fur - Desulfovibrionales
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Phylum: | Proteobacteria/delta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfovibrionales
- By trascription factor - FUR
- By TF family - FUR
- By effector - Iron ion, (Fe2+)
- By pathway - Iron homeostasis
| Genome | Genes | Operons |
|---|---|---|
| Desulfovibrio vulgaris Hildenborough | 34 | 13 |
| Desulfovibrio vulgaris str. Miyazaki F | 16 | 10 |
| Desulfovibrio desulfuricans G20 | 50 | 21 |
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | 16 | 11 |
| Desulfovibrio piger ATCC 29098 | 25 | 11 |
| Desulfovibrio salexigens DSM 2638 | 35 | 20 |
| Desulfovibrio magneticus RS-1 | 19 | 12 |
| Lawsonia intracellularis PHE/MN1-00 | 6 | 5 |
| Desulfomicrobium baculatum DSM 4028 | 1 | 1 |
| Desulfohalobium retbaense DSM 5692 | 1 | 1 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| feoA |
*
Desulfovibrio vulgaris Hildenborough Site: position = -59 score = 4.51878 sequence = TTGATAAAGAAAATCAA Gene: DVU2572: Ferrous iron transport protein A |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -63 score = 4.63141 sequence = ATGAGAAAGATTTTCAA Gene: DvMF_1016: Ferrous iron transport protein A |
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Desulfovibrio desulfuricans G20 Site: position = -58 score = 4.70399 sequence = AGGATTTTCAATTTCAC Site: position = -64 score = 4.7545 sequence = ATGAGAAGGATTTTCAA Gene: Dde_2670: Ferrous iron transport protein A |
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Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -175 score = 5.19504 sequence = TTGAAATTGACTTTCTT Gene: Ddes_1750: Ferrous iron transport protein A |
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Desulfovibrio piger ATCC 29098 Site: position = -188 score = 4.96815 sequence = ATGAAAGTGATTTTCTT Gene: DESPIG_01418: Ferrous iron transport protein A |
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Gene: DMR_19560: Ferrous iron transport protein A |
Gene: LI1082: Ferrous iron transport protein A |
Gene: Dbac_0013: Ferrous iron transport protein A |
Gene: Dret_0317: Ferrous iron transport protein A |
Ferrous iron transport protein A |
| DVU3330 |
*
Desulfovibrio vulgaris Hildenborough Site: position = -74 score = 4.65323 sequence = TTCAATTTCAGTATCAA Site: position = -80 score = 4.78707 sequence = TAGATTTTCAATTTCAG Site: position = -86 score = 4.94298 sequence = TTGATTTAGATTTTCAA Gene: DVU3330: hypothetical iron-regulated P-type ATPase |
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Gene: Ddes_1751: hypothetical iron-regulated P-type ATPase |
Gene: DESPIG_01417: hypothetical iron-regulated P-type ATPase |
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hypothetical iron-regulated P-type ATPase |
| DVU3332 |
Gene: DVU3332: Probable cation-transporting P-type ATPase C (EC 3.6.3.-) (Metal-transporting ATPase Mta72) |
Gene: DvMF_1417: Probable cation-transporting P-type ATPase C (EC 3.6.3.-) (Metal-transporting ATPase Mta72) |
2
Desulfovibrio desulfuricans G20 Gene: Dde_0498: Probable cation-transporting P-type ATPase C (EC 3.6.3.-) (Metal-transporting ATPase Mta72) Gene: Dde_0495: Probable cation-transporting P-type ATPase C (EC 3.6.3.-) (Metal-transporting ATPase Mta72) |
Gene: Ddes_1752: Probable cation-transporting P-type ATPase C (EC 3.6.3.-) (Metal-transporting ATPase Mta72) |
Gene: DESPIG_01416: Probable cation-transporting P-type ATPase C (EC 3.6.3.-) (Metal-transporting ATPase Mta72) |
Gene: Desal_0101: Probable cation-transporting P-type ATPase C (EC 3.6.3.-) (Metal-transporting ATPase Mta72) |
Gene: DMR_28330: Probable cation-transporting P-type ATPase C (EC 3.6.3.-) (Metal-transporting ATPase Mta72) |
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Probable cation-transporting P-type ATPase C (EC 3.6.3.-) (Metal-transporting ATPase Mta72) |
| Ddes_1753 |
Gene: DVU3333: hypothetical protein |
Gene: DvMF_1416: hypothetical protein |
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Gene: Ddes_1753: hypothetical protein |
Gene: DESPIG_01415: hypothetical protein |
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Gene: DMR_28340: hypothetical protein |
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hypothetical protein |
| DVU3331 |
Gene: DVU3331: hypothetical protein |
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hypothetical protein |
| DvMF_1418 |
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*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -146 score = 4.87429 sequence = TTGATTTTCGATATCAA Site: position = -152 score = 5.25538 sequence = TTGACATTGATTTTCGA Gene: DvMF_1418: hypothetical protein |
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Gene: DMR_28320: hypothetical protein |
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hypothetical protein |
| feoB |
Gene: DVU2571: Ferrous iron transport protein B |
Gene: DvMF_1015: Ferrous iron transport protein B |
Gene: Dde_2669: Ferrous iron transport protein B |
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Gene: LI1083: Ferrous iron transport protein B |
Gene: Dbac_1622: Ferrous iron transport protein B |
Gene: Dret_0316: Ferrous iron transport protein B |
Ferrous iron transport protein B |
| pleD |
Gene: DVU2570: GGDEF domain/HAMP domain protein |
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GGDEF domain/HAMP domain protein |
| feoA |
*
Desulfovibrio vulgaris Hildenborough Site: position = -94 score = 5.67448 sequence = TTGACAATCATTTTCAT Gene: DVU2574: ferrous iron transporter component feoA |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -135 score = 5.37984 sequence = TTGACAATCATTTTCAG Gene: DvMF_1018: ferrous iron transporter component feoA |
*
Desulfovibrio desulfuricans G20 Site: position = -53 score = 5.21732 sequence = TTGACAATCATTCTCAT Gene: Dde_2673: ferrous iron transporter component feoA |
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*
Desulfovibrio salexigens DSM 2638 Site: position = -22 score = 4.71766 sequence = CTGACTTTAAATTTCAA Gene: Desal_2172: ferrous iron transporter component feoA |
*
Desulfovibrio magneticus RS-1 Site: position = -50 score = 5.21732 sequence = TTGACAATCATTCTCAT Gene: DMR_19550: ferrous iron transporter component feoA |
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Gene: Dret_0319: ferrous iron transporter component feoA |
ferrous iron transporter component feoA |
| Dde_2672 |
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Gene: Dde_2672: hypothetical protein |
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hypothetical protein |
| DvMF_1017 |
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Gene: DvMF_1017: hypothetical protein |
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hypothetical protein |
| DVU2573 |
Gene: DVU2573: hypothetical protein |
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hypothetical protein |
| CRON 2. | |||||||||||
| CRON 3. | |||||||||||
| DVU3328 |
*
Desulfovibrio vulgaris Hildenborough Site: position = -108 score = 4.76475 sequence = TTGAAAATCTAAATCAA Site: position = -114 score = 4.65099 sequence = CTGAAATTGAAAATCTA Site: position = -120 score = 4.53015 sequence = TTGATACTGAAATTGAA Gene: DVU3328: hypothetical protein |
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hypothetical protein |
| CRON 4. | |||||||||||
| hdd |
*
Desulfovibrio vulgaris Hildenborough Site: position = -88 score = 5.06145 sequence = ATGATTTTCTTTTTCAA Site: position = -94 score = 5.22701 sequence = TTGACAATGATTTTCTT Gene: DVU3123: GAF domain/HD domain protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -95 score = 5.40306 sequence = ATGAGAATGATTTTCAA Gene: DvMF_1513: GAF domain/HD domain protein |
*
Desulfovibrio desulfuricans G20 Site: position = -106 score = 4.84036 sequence = GTGATATTGAAATTCTT Gene: Dde_1151: GAF domain/HD domain protein |
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*
Desulfovibrio salexigens DSM 2638 Site: position = -76 score = 5.11395 sequence = TTGACAATCATTTTCGA Gene: Desal_1904: GAF domain/HD domain protein |
Gene: DMR_28350: GAF domain/HD domain protein |
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Gene: Dbac_0208: GAF domain/HD domain protein |
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GAF domain/HD domain protein |
| gdp |
*
Desulfovibrio vulgaris Hildenborough Site: position = -29 score = 5.38672 sequence = TTGAAAATCATAATCAA Site: position = -35 score = 5.26806 sequence = TTGACTTTGAAAATCAT Gene: DVU0763: diguanylate cyclase |
Gene: DvMF_1514: diguanylate cyclase |
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*
Desulfovibrio salexigens DSM 2638 Site: position = -122 score = 5.21609 sequence = TTGACATTCGTTTTCAT Site: position = -128 score = 4.93675 sequence = TTGATATTGACATTCGT Site: position = -234 score = 4.65003 sequence = ATGAATTTCGAAATCAA Gene: Desal_0110: diguanylate cyclase |
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Gene: Dbac_0207: diguanylate cyclase |
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diguanylate cyclase |
| CRON 5. | |||||||||||
| DVU2575 |
*
Desulfovibrio vulgaris Hildenborough Site: position = -159 score = 5.24886 sequence = ATGAAAATGATTGTCAA Gene: DVU2575: peptidase, M20/M25/M40 family |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -228 score = 4.96495 sequence = CTGAAAATGATTGTCAA Gene: DvMF_1019: peptidase, M20/M25/M40 family |
Gene: Dde_1186: peptidase, M20/M25/M40 family |
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peptidase, M20/M25/M40 family |
| oppD |
Gene: DVU2576: oligopeptide ABC transporter, ATP-binding protein |
Gene: DvMF_1020: oligopeptide ABC transporter, ATP-binding protein |
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Gene: Ddes_1893: oligopeptide ABC transporter, ATP-binding protein |
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*
Lawsonia intracellularis PHE/MN1-00 Site: position = -127 score = 5.29835 sequence = TTGATAATGATTGTCAA Gene: LI1081: oligopeptide ABC transporter, ATP-binding protein |
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oligopeptide ABC transporter, ATP-binding protein |
| CRON 6. | |||||||||||
| DVU0304 |
*
Desulfovibrio vulgaris Hildenborough Site: position = -50 score = 5.11482 sequence = TTGATTTTCGTTTTCAA Site: position = -56 score = 5.32393 sequence = TTGACATTGATTTTCGT Gene: DVU0304: hypothetical protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -61 score = 5.12499 sequence = ATGAAAATCGTTTTCAT Site: position = -67 score = 4.7672 sequence = TTGACAATGAAAATCGT Gene: DvMF_1815: hypothetical protein |
*
Desulfovibrio desulfuricans G20 Site: position = -77 score = 5.4518 sequence = TTGATTTTCATTTTCAC Site: position = -83 score = 5.81591 sequence = TTGACATTGATTTTCAT Gene: Dde_0283: hypothetical protein |
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Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -89 score = 5.82888 sequence = TTGAAATTCAATTTCAA Site: position = -95 score = 5.38275 sequence = TTGACTTTGAAATTCAA Gene: Ddes_1586: hypothetical protein |
*
Desulfovibrio piger ATCC 29098 Site: position = -75 score = 5.32148 sequence = TTGAAATTCTTTTTCAA Site: position = -81 score = 5.13637 sequence = TTGACATTGAAATTCTT Gene: DESPIG_00813: hypothetical protein |
*
Desulfovibrio salexigens DSM 2638 Site: position = -55 score = 5.10951 sequence = CTGAAAATCATTTTCAC Site: position = -61 score = 4.91988 sequence = TTGACACTGAAAATCAT Gene: Desal_3096: hypothetical protein |
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hypothetical protein |
| DVU0303 |
Gene: DVU0303: Tetratricopeptide TPR_2 repeat protein |
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Gene: Dde_0282: Tetratricopeptide TPR_2 repeat protein |
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Tetratricopeptide TPR_2 repeat protein |
| CRON 7. | |||||||||||
| DVU0273 |
*
Desulfovibrio vulgaris Hildenborough Site: position = -34 score = 5.18242 sequence = TTGAAAATTATTTTCAA Site: position = -40 score = 4.75422 sequence = TTGACATTGAAAATTAT Gene: DVU0273: conserved hypothetical protein |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -127 score = 4.83035 sequence = ATGAAAATCGTTTTCAG Site: position = -133 score = 4.63466 sequence = TTGACTATGAAAATCGT Gene: DvMF_2558: conserved hypothetical protein |
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conserved hypothetical protein |
| CRON 8. | |||||||||||
| DMR_44300 |
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*
Desulfovibrio magneticus RS-1 Site: position = -108 score = 5.23001 sequence = ATGATTTTGAATGTCAT Gene: DMR_44300: hypothetical protein |
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hypothetical protein |
| DVU0163 |
*
Desulfovibrio vulgaris Hildenborough Site: position = -33 score = 4.78993 sequence = ATGGCAATGATTATCAT Site: position = -57 score = 4.92612 sequence = ATGATAATCACTTTCTT Gene: DVU0163: lipoprotein, putative |
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Gene: Dde_1896: lipoprotein, putative |
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Gene: DMR_44310: lipoprotein, putative |
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lipoprotein, putative |
| DVU0164 |
Gene: DVU0164: cation efflux family protein |
Gene: DvMF_2581: cation efflux family protein |
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Gene: Desal_3765: cation efflux family protein |
Gene: DMR_32970: cation efflux family protein |
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Gene: Dbac_2025: cation efflux family protein |
Gene: Dret_1021: cation efflux family protein |
cation efflux family protein |
| CRON 9. | |||||||||||
| DvMF_2988 |
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Gene: DvMF_2988: methyl-accepting chemotaxis protein |
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*3
Desulfovibrio magneticus RS-1 Gene: DMR_19950: methyl-accepting chemotaxis protein Gene: DMR_35360: methyl-accepting chemotaxis protein Site: position = 6 score = 5.06151 sequence = CTGAAATTCAAGTTCAT Site: position = 0 score = 4.69917 sequence = ATGAGTCTGAAATTCAA Gene: DMR_40240: methyl-accepting chemotaxis protein |
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methyl-accepting chemotaxis protein |
| CRON 10. | |||||||||||
| DMR_26840 |
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*
Desulfovibrio magneticus RS-1 Site: position = -86 score = 4.63603 sequence = ATGATACTCAGAATCAT Site: position = -92 score = 4.79823 sequence = ATGAAAATGATACTCAG Gene: DMR_26840: hypothetical membrane protein |
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hypothetical membrane protein |
| CRON 11. | |||||||||||
| DMR_12770 |
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*
Desulfovibrio magneticus RS-1 Site: position = -159 score = 5.1683 sequence = TTGAGATTCAATGTCAA Site: position = -165 score = 5.35893 sequence = TTGAAATTGAGATTCAA Gene: DMR_12770: putative small multidrug resistance protein |
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putative small multidrug resistance protein |
| CRON 12. | |||||||||||
| feoA |
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*
Desulfovibrio salexigens DSM 2638 Site: position = -45 score = 4.8744 sequence = ATGCTATTCATATTCAT Site: position = -51 score = 4.94385 sequence = TTGAAAATGCTATTCAT Site: position = -124 score = 5.32076 sequence = TTGAGATTGACTTTCAA Gene: Desal_1569: ferrous iron transport protein A |
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Desulfovibrio magneticus RS-1 Site: position = -176 score = 5.38001 sequence = TTGATATTGAGTATCAT Site: position = -182 score = 4.74226 sequence = TTGACATTGATATTGAG Gene: DMR_11980: ferrous iron transport protein A |
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Gene: Dbac_1621: ferrous iron transport protein A |
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ferrous iron transport protein A |
| feoB |
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Gene: Desal_1570: ferrous iron transport protein B |
Gene: DMR_11990: ferrous iron transport protein B |
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ferrous iron transport protein B |
| CRON 13. | |||||||||||
| DMR_07790 |
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*
Desulfovibrio magneticus RS-1 Site: position = -92 score = 4.77658 sequence = TTGATTTTCATTATCGC Site: position = -98 score = 5.81591 sequence = TTGACATTGATTTTCAT Gene: DMR_07790: hypothetical protein |
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hypothetical protein |
| DMR_07780 |
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Gene: DMR_07780: hypothetical protein |
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hypothetical protein |
| CRON 14. | |||||||||||
| DMR_06220 |
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*
Desulfovibrio magneticus RS-1 Site: position = -71 score = 5.71463 sequence = TTGATTTTCATTTTCAA Site: position = -77 score = 4.90708 sequence = GTGGTATTGATTTTCAT Gene: DMR_06220: hypothetical protein |
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hypothetical protein |
| CRON 15. | |||||||||||
| DMR_03560 |
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*
Desulfovibrio magneticus RS-1 Site: position = -69 score = 5.60593 sequence = TTGACAATGATTTTCAA Site: position = -63 score = 4.81404 sequence = ATGATTTTCAATTTCGC Gene: DMR_03560: hypothetical protein |
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hypothetical protein |
| CRON 16. | |||||||||||
| Ddes_1585 |
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Gene: Ddes_1585: ferrous iron transport protein B |
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Desulfovibrio piger ATCC 29098 Site: position = -112 score = 5.74736 sequence = TTGACATTCATTTTCAA Gene: DESPIG_00814: ferrous iron transport protein B |
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ferrous iron transport protein B |
| CRON 17. | |||||||||||
| Ddes_1700 |
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Gene: Ddes_1700: hypothetical protein |
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Desulfovibrio piger ATCC 29098 Site: position = 6 score = 4.60897 sequence = ATGACTTTCATCCTCAT Site: position = 0 score = 4.63454 sequence = ATGCAAATGACTTTCAT Gene: DESPIG_00069: hypothetical protein |
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hypothetical protein |
| Ddes_1701 |
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Gene: Ddes_1701: hypothetical protein |
Gene: DESPIG_00068: hypothetical protein |
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hypothetical protein |
| CRON 18. | |||||||||||
| Ddes_1247 |
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*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -84 score = 4.9158 sequence = TTGAAAAAGAATTTCAA Gene: Ddes_1247: hypothetical protein |
*
Desulfovibrio piger ATCC 29098 Site: position = -63 score = 4.67347 sequence = TTGACATCAATTTTCAA Gene: DESPIG_00020: hypothetical protein |
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hypothetical protein |
| Ddes_1248 |
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Gene: Ddes_1248: hypothetical protein |
Gene: DESPIG_00019: hypothetical protein |
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hypothetical protein |
| CRON 19. | |||||||||||
| Desal_3268 |
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*
Desulfovibrio salexigens DSM 2638 Site: position = -74 score = 4.61599 sequence = TTGATTTTGAAGTTTAT Site: position = -98 score = 4.61153 sequence = TTGAATTCGATTTTGAT Gene: Desal_3268: 2,5-didehydrogluconate reductase |
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2,5-didehydrogluconate reductase |
| CRON 20. | |||||||||||
| Ddes_0429 |
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Gene: Ddes_0429: TonB-dependent receptor |
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*
Desulfovibrio salexigens DSM 2638 Site: position = -51 score = 4.74495 sequence = TTGACCATGAATATCAA Site: position = -45 score = 5.10841 sequence = ATGAATATCAAAATCAA Gene: Desal_1878: TonB-dependent receptor |
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TonB-dependent receptor |
| Ddes_0428 |
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Gene: Ddes_0428: Methyltransferase type 12 |
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Gene: Desal_1877: Methyltransferase type 12 |
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Methyltransferase type 12 |
| Ddes_0427 |
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Gene: Ddes_0427: ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein |
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Gene: Desal_1876: ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein |
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ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein |
| Ddes_0426 |
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Gene: Ddes_0426: binding-protein-dependent transport systems inner membrane component |
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Gene: Desal_1875: binding-protein-dependent transport systems inner membrane component |
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binding-protein-dependent transport systems inner membrane component |
| CRON 21. | |||||||||||
| Desal_1504 |
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*
Desulfovibrio salexigens DSM 2638 Site: position = -67 score = 5.74736 sequence = TTGACATTGATTTTCAA Site: position = -123 score = 4.59156 sequence = ATTAATTTCATTTTCTT Site: position = -129 score = 5.19368 sequence = TTGAAAATTAATTTCAT Gene: Desal_1504: ferrous ion transport protein A |
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ferrous ion transport protein A |
| Desal_1503 |
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Gene: Desal_1503: ferrous iron transport protein B |
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ferrous iron transport protein B |
| CRON 22. | |||||||||||
| fur2 |
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Gene: Dde_0497: ferric uptake regulator, Fur family |
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*
Desulfovibrio salexigens DSM 2638 Site: position = 6 score = 4.56035 sequence = ATGGATTTCATTTTCGA Site: position = 0 score = 5.0677 sequence = ATGAAAATGGATTTCAT Gene: Desal_0460: ferric uptake regulator, Fur family |
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ferric uptake regulator, Fur family |
| CRON 23. | |||||||||||
| Desal_0451 |
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*
Desulfovibrio salexigens DSM 2638 Site: position = -59 score = 5.39003 sequence = TTGAAATTCTTTTTCAT Site: position = -65 score = 5.27519 sequence = TTGAAATTGAAATTCTT Gene: Desal_0451: TonB-dependent receptor |
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TonB-dependent receptor |
| CRON 24. | |||||||||||
| Ddes_1652 |
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*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -67 score = 5.76489 sequence = TTGAATTTCAATTTCAT Site: position = -73 score = 5.69007 sequence = TTGACATTGAATTTCAA Gene: Ddes_1652: hypothetical protein |
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Desulfovibrio piger ATCC 29098 Site: position = 0 score = 4.78552 sequence = ATGAAATTCTTTTTCTA Site: position = -6 score = 5.13376 sequence = TTGAAAATGAAATTCTT Gene: DESPIG_02510: hypothetical protein |
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hypothetical protein |
| CRON 25. | |||||||||||
| Ddes_0477 |
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*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -45 score = 4.50109 sequence = TTGATTTTCAATCTAAA Site: position = -51 score = 5.88617 sequence = TTGAAATTGATTTTCAA Gene: Ddes_0477: dihydrodipicolinate reductase |
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dihydrodipicolinate reductase |
| CRON 26. | |||||||||||
| DvMF_3169 |
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Desulfovibrio vulgaris str. Miyazaki F Site: position = -90 score = 3.79857 sequence = TTGAAAGGCGTTCTCAT Gene: DvMF_3169: mercuric transport protein periplasmic component |
*
Desulfovibrio desulfuricans G20 Site: position = -126 score = 4.68378 sequence = TTGACATCGATTCTCAA Gene: Dde_1312: mercuric transport protein periplasmic component |
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*
Desulfovibrio salexigens DSM 2638 Site: position = -131 score = 3.91348 sequence = TTGAGAATAATTAGCAG Gene: Desal_1558: mercuric transport protein periplasmic component |
Gene: DMR_22340: mercuric transport protein periplasmic component |
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Gene: Dbac_0968: mercuric transport protein periplasmic component |
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mercuric transport protein periplasmic component |
| CRON 27. | |||||||||||
| feoA |
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Gene: Ddes_0645: FeoA family protein |
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Desulfovibrio salexigens DSM 2638 Site: position = -164 score = 4.58516 sequence = ATGAAAACGAATGTCAA Site: position = -52 score = 4.9447 sequence = TTGATTTCGAAATTCAT Gene: Desal_0111: FeoA family protein |
Gene: DMR_16640: FeoA family protein |
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FeoA family protein |
| feoB |
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Gene: Ddes_0646: ferrous iron transport protein B |
Gene: DESPIG_01975: ferrous iron transport protein B |
Gene: Desal_0112: ferrous iron transport protein B |
Gene: DMR_16650: ferrous iron transport protein B |
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ferrous iron transport protein B |
| DESPIG_01976 |
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Gene: DESPIG_01976: hypothetical protein |
Gene: Desal_0113: hypothetical protein |
*
Desulfovibrio magneticus RS-1 Site: position = 12 score = 4.53816 sequence = ATGAAAATGCTTTTCGT Gene: DMR_16660: hypothetical protein |
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hypothetical protein |
| Ddes_0648 |
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*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -28 score = 5.20664 sequence = TTGAAATTCAAATTCTA Site: position = -34 score = 4.65008 sequence = AAGACTTTGAAATTCAA Gene: Ddes_0648: hypothetical protein |
Gene: DESPIG_01977: hypothetical protein |
Gene: Desal_0114: hypothetical protein |
Gene: DMR_16670: hypothetical protein |
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hypothetical protein |
| gdp |
|
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*
Desulfovibrio desulfuricans G20 Site: position = -115 score = 5.39421 sequence = TTGAGTTTCATATTCAT Site: position = -121 score = 5.43071 sequence = TTGATTTTGAGTTTCAT Gene: Dde_3048: diguanylate cyclase |
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diguanylate cyclase |
| Dde_3047 |
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Gene: Dde_3047: serine phosphatase |
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serine phosphatase |
| Dde_3046 |
|
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Gene: Dde_3046: hypothetical protein |
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hypothetical protein |
| Dde_3045 |
|
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Gene: Dde_3045: Fe-S OXIDOREDUCTASE (1.8.-.-) |
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Gene: Dret_2359: Fe-S OXIDOREDUCTASE (1.8.-.-) |
Fe-S OXIDOREDUCTASE (1.8.-.-) |
| CRON 28. | |||||||||||
| Dde_2805 |
|
|
*
Desulfovibrio desulfuricans G20 Site: position = -184 score = 4.65195 sequence = GTGAATTTCAATTACAA Site: position = -190 score = 5.37827 sequence = TTGAAAGTGAATTTCAA Gene: Dde_2805: prophage antirepressor-like |
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prophage antirepressor-like |
| Dde_1731 |
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2
Desulfovibrio desulfuricans G20 Gene: Dde_1731: rha protein, phage phi-80 Gene: Dde_2806: rha protein, phage phi-80 |
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Gene: Dbac_0897: rha protein, phage phi-80 |
|
rha protein, phage phi-80 |
| DvMF_0873 |
|
Gene: DvMF_0873: nuclease (SNase domain protein) |
2
Desulfovibrio desulfuricans G20 Gene: Dde_2354: nuclease (SNase domain protein) Gene: Dde_2807: nuclease (SNase domain protein) |
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Gene: DMR_19170: nuclease (SNase domain protein) |
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nuclease (SNase domain protein) |
| CRON 29. | |||||||||||
| Dde_1733 |
|
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*
Desulfovibrio desulfuricans G20 Site: position = -23 score = 4.65195 sequence = GTGAATTTCAATTACAA Site: position = -29 score = 5.37827 sequence = TTGAAAGTGAATTTCAA Gene: Dde_1733: hypothetical protein |
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hypothetical protein |
| CRON 30. | |||||||||||
| DESPIG_00269 |
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*
Desulfovibrio piger ATCC 29098 Site: position = 28 score = 5.32148 sequence = TTGAAATTCTTTTTCAA Site: position = 22 score = 5.00383 sequence = TTGACTTTGAAATTCTT Gene: DESPIG_00269: hypothetical protein |
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hypothetical protein |
| DESPIG_00268 |
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Gene: DESPIG_00268: hypothetical protein |
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hypothetical protein |
| DESPIG_00267 |
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Gene: DESPIG_00267: hypothetical protein |
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hypothetical protein |
| Dde_1608 |
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Gene: Dde_1608: amino acid adenylation |
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Gene: DESPIG_00266: hypothetical protein |
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amino acid adenylation |
| DESPIG_00265 |
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Gene: DESPIG_00265: hypothetical protein |
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hypothetical protein |
| DESPIG_00264 |
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Gene: DESPIG_00264: hypothetical protein |
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hypothetical protein |
| DESPIG_00263 |
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Gene: DESPIG_00263: hypothetical protein |
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hypothetical protein |
| DESPIG_00262 |
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Gene: DESPIG_00262: hypothetical protein |
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hypothetical protein |
| Dde_1609 |
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*
Desulfovibrio desulfuricans G20 Site: position = -179 score = 5.16146 sequence = ATGATTTTCAATGTCAA Site: position = -185 score = 4.70473 sequence = GCGAAAATGATTTTCAA Gene: Dde_1609: amino acid adenylation |
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amino acid adenylation |
| CRON 31. | |||||||||||
| copA |
*
Desulfovibrio vulgaris Hildenborough Site: position = -262 score = 4.77117 sequence = CTGATAATGATTATCTT Gene: DVU2324: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) |
*
Desulfovibrio vulgaris str. Miyazaki F Site: position = -139 score = 3.78977 sequence = ATGAGAACGCCTTTCAA Gene: DvMF_3170: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) |
*
Desulfovibrio desulfuricans G20 Site: position = -31 score = 4.42706 sequence = TTGAGAATCGATGTCAA Gene: Dde_1313: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -136 score = 3.6966 sequence = TTCAATTTCAATGTGGT Site: position = -142 score = 3.71204 sequence = ACAGTTTTCAATTTCAA Gene: Ddes_1876: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) |
*
Desulfovibrio piger ATCC 29098 Site: position = -177 score = 5.71463 sequence = TTGATTTTCATTTTCAA Site: position = -183 score = 4.33444 sequence = CACATATTGATTTTCAT Site: position = -225 score = 4.23668 sequence = TTGACTTTGAGGATCTT Gene: DESPIG_02348: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) |
*
Desulfovibrio salexigens DSM 2638 Site: position = -191 score = 3.99952 sequence = AAGATTTTCACTGTCAC Site: position = -68 score = 4.43106 sequence = TTGATTCTTAATATCAA Gene: Desal_0634: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: DMR_33500: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) |
*
Lawsonia intracellularis PHE/MN1-00 Site: position = 54 score = 4.29601 sequence = TTGAACTTTATTGTCAA Gene: LI1125: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) |
*
Desulfomicrobium baculatum DSM 4028 Site: position = -183 score = 3.89158 sequence = ACCAATTTGTTTTTCAA Gene: Dbac_3067: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) |
*
Desulfohalobium retbaense DSM 5692 Site: position = -179 score = 3.62359 sequence = TTGATGTCCATATACAG Gene: Dret_1877: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) |
Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) |
| CRON 32. | |||||||||||
| DvMF_2569 |
|
Gene: DvMF_2569: ATPase associated with various cellular activities AAA_3 |
*
Desulfovibrio desulfuricans G20 Site: position = -31 score = 4.93484 sequence = TTGAAAATGAAATTTAT Site: position = -94 score = 4.6352 sequence = TTGGTTTTCAATATCAG Site: position = -100 score = 4.91395 sequence = CTGAAATTGGTTTTCAA Gene: Dde_0483: ATPase |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -74 score = 5.35198 sequence = TTGACTTTCATTTTCAC Site: position = -80 score = 5.41521 sequence = ATGACATTGACTTTCAT Gene: Ddes_1729: ATPase associated with various cellular activities AAA_3 |
*
Desulfovibrio piger ATCC 29098 Site: position = -32 score = 4.66239 sequence = ATGAAATTCAATTTATT Site: position = -38 score = 5.51268 sequence = TTGAAAATGAAATTCAA Gene: DESPIG_01861: hypothetical protein |
*
Desulfovibrio salexigens DSM 2638 Site: position = -77 score = 4.50074 sequence = TCGAAAATCGTTTTCAA Gene: Desal_2558: ATPase associated with various cellular activities AAA_3 |
Gene: DMR_22740: hypothetical protein |
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ATPase associated with various cellular activities AAA_3 |
| DvMF_2570 |
|
Gene: DvMF_2570: hypothetical protein |
Gene: Dde_0484: hypothetical protein |
Gene: Ddes_1728: hypothetical protein |
Gene: DESPIG_01860: hypothetical protein |
Gene: Desal_2559: hypothetical protein |
Gene: DMR_22750: hypothetical protein |
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hypothetical protein |
| DvMF_2571 |
|
Gene: DvMF_2571: hypothetical protein |
Gene: Dde_0485: hypothetical protein |
Gene: Ddes_1727: hypothetical protein |
Gene: DESPIG_01859: hypothetical protein |
Gene: Desal_2560: hypothetical protein |
Gene: DMR_22760: hypothetical protein |
|
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hypothetical protein |
| CRON 33. | |||||||||||
| pep |
Gene: DVU0941: metalloprotease, iron-related |
Gene: DvMF_1365: metalloprotease, iron-related |
*
Desulfovibrio desulfuricans G20 Site: position = -284 score = 4.61472 sequence = CTGGTTTTCATTATCAT Site: position = -280 score = 4.05631 sequence = TTCAGACTGGTTTTCAT Gene: Dde_2677: metalloprotease, iron-related |
Gene: Ddes_0345: metalloprotease, iron-related |
Gene: DESPIG_02308: metalloprotease, iron-related |
*
Desulfovibrio salexigens DSM 2638 Site: position = -136 score = 4.37318 sequence = ATCATAATCTTTATCAT Site: position = -217 score = 3.84567 sequence = TTCAAAATCAATATTTA Site: position = -223 score = 4.7762 sequence = TTTAAATTCAAAATCAA Gene: Desal_0032: metalloprotease, iron-related |
Gene: DMR_43100: metalloprotease, iron-related |
*
Lawsonia intracellularis PHE/MN1-00 Site: position = -270 score = 4.44138 sequence = TTGAATTTGAAATGCTT Gene: LI0650: metalloprotease, iron-related |
Gene: Dbac_0490: metalloprotease, iron-related |
Gene: Dret_1565: metalloprotease, iron-related |
metalloprotease, iron-related |
| fur |
Gene: DVU0942: Ferric uptake regulator, Fur family |
Gene: DvMF_1364: Ferric uptake regulator, Fur family |
Gene: Dde_2676: Ferric uptake regulator, Fur family |
Gene: Ddes_0603: Ferric uptake regulator, Fur family |
Gene: DESPIG_03126: Ferric uptake regulator, Fur family |
*2
Desulfovibrio salexigens DSM 2638 Site: position = -68 score = 5.15985 sequence = TTGACAATGATTATCAC Site: position = -117 score = 4.5158 sequence = TTGAGTTTCAATTGCAG Gene: Desal_0108: Ferric uptake regulator, Fur family Site: position = -74 score = 4.01239 sequence = TTGACATCGGTCTTCAA Gene: Desal_3797: Ferric uptake regulator, Fur family |
|
Gene: LI0035: Ferric uptake regulator, Fur family |
|
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Ferric uptake regulator, Fur family |
| CRON 34. | |||||||||||
| Desal_0644 |
|
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Gene: Desal_0644: Methyltransferase type 11 |
|
*2
Lawsonia intracellularis PHE/MN1-00 Site: position = 10 score = 5.14563 sequence = TTGAAATTCAATCTCAG Site: position = 4 score = 4.32477 sequence = AGAATATTGAAATTCAA Gene: LIA012: NA Site: position = 40 score = 4.38533 sequence = ATGAATATATTATTCAT Gene: LIA011: S-adenosylmethionine-dependentmethyltransferase |
|
|
Methyltransferase type 11 |
| CRON 35. | |||||||||||
| bfr |
Gene: DVU1397: Bacterioferritin |
Gene: DvMF_1981: Bacterioferritin |
*
Desulfovibrio desulfuricans G20 Site: position = 34 score = 3.58017 sequence = ATGTCATTGAAGTTCTG Site: position = -120 score = 3.66778 sequence = CTGACTTTCGTCATCAC Gene: Dde_0133: Bacterioferritin |
Gene: Ddes_1387: Bacterioferritin |
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*
Lawsonia intracellularis PHE/MN1-00 Site: position = -105 score = 3.66547 sequence = ATGATAGTAATCTTTAA Site: position = -235 score = 4.01909 sequence = TTGACGTTTATATTCGT Site: position = -307 score = 4.47968 sequence = TTGATATTCATTACGAT Site: position = -313 score = 4.08271 sequence = GTTATGTTGATATTCAT Gene: LI0660: Bacterioferritin |
Gene: Dbac_0293: Bacterioferritin |
Gene: Dret_0066: Bacterioferritin |
Bacterioferritin |
| CRON 36. | |||||||||||
| fur3 |
|
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*
Desulfovibrio desulfuricans G20 Site: position = -76 score = 5.25733 sequence = ATGAAAATAATTTTCAT Gene: Dde_0753: ferric uptake regulation protein |
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ferric uptake regulation protein |
| CRON 37. | |||||||||||
| foxR |
*
Desulfovibrio vulgaris Hildenborough Site: position = -257 score = 5.47097 sequence = TTGATTTTCACTTTCAT Site: position = -263 score = 5.35198 sequence = TTGACTTTGATTTTCAC Gene: DVU2378: transcriptional regulator, AraC family |
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transcriptional regulator, AraC family |
| pqqL |
Gene: DVU2379: peptidase, M16 family, putative |
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peptidase, M16 family, putative |
| atpX |
Gene: DVU2380: ABC transporter, ATP-binding protein |
|
Gene: Dde_0445: ATPase |
|
*
Desulfovibrio piger ATCC 29098 Site: position = -50 score = 5.25749 sequence = TTGAATTTCTTTTTCAT Site: position = -56 score = 5.31115 sequence = TTGACATTGAATTTCTT Gene: DESPIG_01980: hypothetical protein |
|
*
Desulfovibrio magneticus RS-1 Site: position = -35 score = 4.85963 sequence = ATGAAATTGATTATCGC Gene: DMR_04510: putative ABC transporter ATP-binding protein |
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ABC transporter, ATP-binding protein |
| DVU2381 |
Gene: DVU2381: conserved hypothetical protein |
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Gene: DESPIG_01979: hypothetical protein |
|
Gene: DMR_04500: hypothetical membrane protein |
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conserved hypothetical protein |
| DVU2382 |
Gene: DVU2382: conserved domain protein |
|
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conserved domain protein |
| DVU2383 |
Gene: DVU2383: tonB dependent receptor domain protein |
|
*
Desulfovibrio desulfuricans G20 Site: position = -34 score = 4.82889 sequence = TTGAAAATGAGACTCAT Gene: Dde_0447: TonB dependent receptor domain-containing protein |
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tonB dependent receptor domain protein |
| DVU2384 |
Gene: DVU2384: ABC transporter, periplasmic substrate-binding protein |
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ABC transporter, periplasmic substrate-binding protein |
| DVU2385 |
Gene: DVU2385: ABC transporter, permease protein |
|
Gene: Dde_0449: putative peptide transport system permease protein |
|
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ABC transporter, permease protein |
| oppC |
Gene: DVU2386: ABC transporter, permease protein |
|
Gene: Dde_0450: putative peptide transport system permease protein |
|
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ABC transporter, permease protein |
| DVU2387 |
Gene: DVU2387: ABC transporter, ATP-binding protein |
|
Gene: Dde_0451: ATPase |
|
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ABC transporter, ATP-binding protein |
| tolQ-1 |
Gene: DVU2388: tolQ protein |
|
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*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -32 score = 5.08272 sequence = TTCAATTTCATATTCAT Site: position = -38 score = 5.76489 sequence = TTGAATTTCAATTTCAT Gene: Ddes_1459: MotA/TolQ/ExbB proton channel |
|
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tolQ protein |
| tolR |
Gene: DVU2389: biopolymer transport protein, ExbD/TolR family |
|
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Gene: Ddes_1460: Biopolymer transport protein ExbD/TolR |
|
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biopolymer transport protein, ExbD/TolR family |
| DVU2390 |
Gene: DVU2390: TonB domain protein |
|
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|
TonB domain protein |
| Dde_0448 |
|
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Gene: Dde_0448: ABC transporter, periplasmic substrate-binding protein |
|
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ABC transporter, periplasmic substrate-binding protein |
| Dde_0452 |
|
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Gene: Dde_0452: hypothetical protein |
|
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hypothetical protein |
| Dde_0453 |
|
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Gene: Dde_0453: biopolymer transport proteins-like |
|
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biopolymer transport proteins-like |
| Dde_0454 |
|
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Gene: Dde_0454: biopolymer transport proteins-like |
|
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|
biopolymer transport proteins-like |
| Dde_0455 |
|
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Gene: Dde_0455: biopolymer transport protein (ExbD2) |
|
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|
biopolymer transport protein (ExbD2) |
| Dde_0456 |
|
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Gene: Dde_0456: TonB-like |
|
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TonB-like |
| Dde_0457 |
|
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Gene: Dde_0457: TPR repeat-containing protein |
|
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TPR repeat-containing protein |
| Dde_2152 |
|
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*
Desulfovibrio desulfuricans G20 Site: position = -42 score = 4.51155 sequence = TTCAGAATCAAAATCAA Site: position = -48 score = 4.70147 sequence = ATGAGTTTCAGAATCAA Gene: Dde_2152: hypothetical protein |
|
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*
Desulfovibrio salexigens DSM 2638 Site: position = -123 score = 4.52474 sequence = ATGCAATTGAAATTCAC Site: position = -117 score = 5.21594 sequence = TTGAAATTCACAATCAA Gene: Desal_2081: hypothetical protein |
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|
hypothetical protein |
| Desal_2082 |
|
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|
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Gene: Desal_2082: MotA/TolQ/ExbB proton channel |
|
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|
|
MotA/TolQ/ExbB proton channel |
| Dde_2154 |
|
|
Gene: Dde_2154: biopolymer transport protein (ExbB)-like |
|
|
Gene: Desal_2083: MotA/TolQ/ExbB proton channel |
|
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|
|
biopolymer transport protein (ExbB)-like |
| Dde_2155 |
|
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Gene: Dde_2155: biopolymer transport protein (ExbD2) |
|
|
Gene: Desal_2084: Biopolymer transport protein ExbD/TolR |
|
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|
biopolymer transport protein (ExbD2) |
| Dde_2156 |
|
|
Gene: Dde_2156: TonB-like |
Gene: Ddes_1461: TonB family protein |
|
Gene: Desal_2085: TonB family protein |
|
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|
|
TonB-like |
| Dde_2157 |
|
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Gene: Dde_2157: TPR repeat-containing protein |
|
|
Gene: Desal_2086: Tetratricopeptide domain protein |
|
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|
|
TPR repeat-containing protein |
| Dde_2153 |
|
|
Gene: Dde_2153: transport protein TolQ-like |
|
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|
transport protein TolQ-like |
| DESPIG_01978 |
|
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|
|
Gene: DESPIG_01978: hypothetical protein |
|
Gene: DMR_04490: hypothetical membrane protein |
|
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|
hypothetical protein |
| pqqL |
|
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*
Desulfovibrio desulfuricans G20 Site: position = -49 score = 5.13388 sequence = ATAAATTTCATTTTCAT Site: position = -55 score = 5.20005 sequence = ATGAAAATAAATTTCAT Gene: Dde_0444: M16 family peptidase putative |
|
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|
peptidase M16 domain protein |
| Dde_0446 |
|
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Gene: Dde_0446: hypothetical protein |
|
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|
hypothetical protein |
| CRON 38. | |||||||||||
| Dde_3146 |
|
|
*
Desulfovibrio desulfuricans G20 Site: position = -105 score = 3.41523 sequence = ATGAAAATGAATCGTTT Site: position = -56 score = 4.15461 sequence = CTGATGATGAAATTCTT Site: position = -50 score = 4.55777 sequence = ATGAAATTCTTTATCGA Gene: Dde_3146: hypothetical protein |
|
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|
hypothetical protein |
| CRON 39. | |||||||||||
| Dde_1239 |
|
|
*
Desulfovibrio desulfuricans G20 Site: position = -97 score = 3.60333 sequence = ACAATAACGAAATTCAT Site: position = -91 score = 5.03881 sequence = ACGAAATTCATTATCAT Site: position = -85 score = 3.3727 sequence = TTCATTATCATAATGTG Site: position = -71 score = 3.54872 sequence = GTGGGTTTCATTGTGAT Gene: Dde_1239: hypothetical protein |
|
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|
|
hypothetical protein |
| CRON 40. | |||||||||||
| Ddes_0430 |
|
|
*
Desulfovibrio desulfuricans G20 Site: position = -122 score = 3.41235 sequence = CAGAAAATAATATTCTG Site: position = -64 score = 5.4006 sequence = TTGACATTGAAAATCAT Site: position = -58 score = 4.98993 sequence = TTGAAAATCATTTTCGC Gene: Dde_1611: Transcriptional regulator, AraC family |
*
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -192 score = 3.81994 sequence = TTGAATGTTCTTTTCAG Site: position = -198 score = 4.16525 sequence = TTGAAATTGAATGTTCT Gene: Ddes_0430: Transcriptional regulator, AraC family |
|
*
Desulfovibrio salexigens DSM 2638 Site: position = -71 score = 5.16255 sequence = CTGATATTGACTTTCAA Site: position = -65 score = 4.42681 sequence = TTGACTTTCAATCTCTG Site: position = -29 score = 3.45182 sequence = ATTAATATCAAAATAAC Gene: Desal_1879: transcriptional regulator, AraC family |
|
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Transcriptional regulator, AraC family |
| CRON 41. | |||||||||||
| fld |
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Desulfovibrio vulgaris Hildenborough Site: position = -199 score = 3.65721 sequence = GTGATGTGCATTTTTAT Site: position = -181 score = 4.25556 sequence = TTGAAAACAAAAATCAA Site: position = -175 score = 4.35497 sequence = ACAAAAATCAATTTCAA Gene: DVU2680: Flavodoxin, iron-repressed |
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Desulfovibrio vulgaris str. Miyazaki F Site: position = -317 score = 5.09266 sequence = AGGATTTTCATTTTCAT Site: position = -323 score = 5.16473 sequence = TTGAAAAGGATTTTCAT Gene: DvMF_1143: Flavodoxin, iron-repressed |
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Desulfovibrio desulfuricans G20 Site: position = -256 score = 5.40231 sequence = ATGAATTTCATTTTCAC Site: position = -262 score = 5.61719 sequence = TTGACAATGAATTTCAT Gene: Dde_3667: Flavodoxin, iron-repressed |
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Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Site: position = -48 score = 4.51858 sequence = ATGAATTTCATTTTATA Site: position = -54 score = 5.756 sequence = TTGAAAATGAATTTCAT Gene: Ddes_1951: Flavodoxin, iron-repressed |
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Desulfovibrio piger ATCC 29098 Site: position = -52 score = 4.74147 sequence = TTGAATTTCTTTTTCTA Site: position = -58 score = 5.44996 sequence = TTGAAATTGAATTTCTT Gene: DESPIG_01466: Flavodoxin, iron-repressed |
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Desulfovibrio salexigens DSM 2638 Site: position = -70 score = 4.72142 sequence = TTGAATTTCACTCTCAC Site: position = -76 score = 5.2947 sequence = TTGACTTTGAATTTCAC Site: position = -82 score = 4.93072 sequence = TTGATATTGACTTTGAA Gene: Desal_0805: Flavodoxin, iron-repressed |
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Desulfovibrio magneticus RS-1 Site: position = -86 score = 5.44089 sequence = CTGAAAATCATTTTCAT Site: position = -92 score = 4.91988 sequence = TTGACACTGAAAATCAT Gene: DMR_03500: Flavodoxin, iron-repressed |
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Flavodoxin, iron-repressed |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |