Regulon of Fur in Desulfovibrio vulgaris Hildenborough

Properties
Regulator type:	Transcription factor
TF locus tag:	DVU0942
Regulator family:	FUR
Regulation mode:	repressor
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Regulog:	Fur - Desulfovibrionales
Statistics of regulated genes:
- Genes	34
- Operons	13
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 193 sites [see more]

Member of regulog collections

By taxonomy - Desulfovibrionales
By trascription factor - FUR
By TF family - FUR
By effector - Iron ion, (Fe2+)
By pathway - Iron homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -263 Score: 5.4 Sequence: TTGACTTTGATTTTCAC Position: -257 Score: 5.5 Sequence: TTGATTTTCACTTTCAT Locus tag: DVU2378 Name: foxR Funciton: transcriptional regulator, AraC family Locus tag: DVU2379 Name: pqqL Funciton: peptidase, M16 family, putative Locus tag: DVU2380 Name: atpX Funciton: ABC transporter, ATP-binding protein Locus tag: DVU2381 Name: null Funciton: conserved hypothetical protein Locus tag: DVU2382 Name: null Funciton: conserved domain protein Locus tag: DVU2383 Name: null Funciton: tonB dependent receptor domain protein Locus tag: DVU2384 Name: null Funciton: ABC transporter, periplasmic substrate-binding protein Locus tag: DVU2385 Name: null Funciton: ABC transporter, permease protein Locus tag: DVU2386 Name: oppC Funciton: ABC transporter, permease protein Locus tag: DVU2387 Name: null Funciton: ABC transporter, ATP-binding protein Locus tag: DVU2388 Name: tolQ-1 Funciton: tolQ protein Locus tag: DVU2389 Name: tolR Funciton: biopolymer transport protein, ExbD/TolR family Locus tag: DVU2390 Name: null Funciton: TonB domain protein
	DVU2378	foxR	transcriptional regulator, AraC family
	DVU2379	pqqL	peptidase, M16 family, putative
	DVU2380	atpX	ABC transporter, ATP-binding protein
	DVU2381		conserved hypothetical protein
	DVU2382		conserved domain protein
	DVU2383		tonB dependent receptor domain protein
	DVU2384		ABC transporter, periplasmic substrate-binding protein
	DVU2385		ABC transporter, permease protein
	DVU2386	oppC	ABC transporter, permease protein
	DVU2387		ABC transporter, ATP-binding protein
	DVU2388	tolQ-1	tolQ protein
	DVU2389	tolR	biopolymer transport protein, ExbD/TolR family
	DVU2390		TonB domain protein
Position: -59 Score: 4.5 Sequence: TTGATAAAGAAAATCAA Locus tag: DVU2572 Name: feoA Funciton: Ferrous iron transport protein A Locus tag: DVU2571 Name: feoB Funciton: Ferrous iron transport protein B Locus tag: DVU2570 Name: pleD Funciton: GGDEF domain/HAMP domain protein
	DVU2572	feoA	Ferrous iron transport protein A
	DVU2571	feoB	Ferrous iron transport protein B
	DVU2570	pleD	GGDEF domain/HAMP domain protein
Position: -94 Score: 5.7 Sequence: TTGACAATCATTTTCAT Locus tag: DVU2574 Name: feoA Funciton: ferrous iron transporter component feoA Locus tag: DVU2573 Name: null Funciton: hypothetical protein
	DVU2574	feoA	ferrous iron transporter component feoA
	DVU2573		hypothetical protein
Position: -86 Score: 4.9 Sequence: TTGATTTAGATTTTCAA Position: -80 Score: 4.8 Sequence: TAGATTTTCAATTTCAG Position: -74 Score: 4.7 Sequence: TTCAATTTCAGTATCAA Locus tag: DVU3330 Name: null Funciton: hypothetical iron-regulated P-type ATPase Locus tag: DVU3331 Name: null Funciton: hypothetical protein Locus tag: DVU3332 Name: null Funciton: Probable cation-transporting P-type ATPase C (EC 3.6.3.-) (Metal-transporting ATPase Mta72) Locus tag: DVU3333 Name: null Funciton: hypothetical protein
	DVU3330		hypothetical iron-regulated P-type ATPase
	DVU3331		hypothetical protein
	DVU3332		Probable cation-transporting P-type ATPase C (EC 3.6.3.-) (Metal-transporting ATPase Mta72)
	DVU3333		hypothetical protein
Position: -120 Score: 4.5 Sequence: TTGATACTGAAATTGAA Position: -114 Score: 4.7 Sequence: CTGAAATTGAAAATCTA Position: -108 Score: 4.8 Sequence: TTGAAAATCTAAATCAA Locus tag: DVU3328 Name: null Funciton: hypothetical protein
	DVU3328		hypothetical protein
Position: -35 Score: 5.3 Sequence: TTGACTTTGAAAATCAT Position: -29 Score: 5.4 Sequence: TTGAAAATCATAATCAA Locus tag: DVU0763 Name: gdp Funciton: diguanylate cyclase
	DVU0763	gdp	diguanylate cyclase
Position: -94 Score: 5.2 Sequence: TTGACAATGATTTTCTT Position: -88 Score: 5.1 Sequence: ATGATTTTCTTTTTCAA Locus tag: DVU3123 Name: hdd Funciton: GAF domain/HD domain protein
	DVU3123	hdd	GAF domain/HD domain protein
Position: -159 Score: 5.2 Sequence: ATGAAAATGATTGTCAA Locus tag: DVU2575 Name: null Funciton: peptidase, M20/M25/M40 family Locus tag: DVU2576 Name: oppD Funciton: oligopeptide ABC transporter, ATP-binding protein
	DVU2575		peptidase, M20/M25/M40 family
	DVU2576	oppD	oligopeptide ABC transporter, ATP-binding protein
Position: -56 Score: 5.3 Sequence: TTGACATTGATTTTCGT Position: -50 Score: 5.1 Sequence: TTGATTTTCGTTTTCAA Locus tag: DVU0304 Name: null Funciton: hypothetical protein Locus tag: DVU0303 Name: null Funciton: Tetratricopeptide TPR_2 repeat protein
	DVU0304		hypothetical protein
	DVU0303		Tetratricopeptide TPR_2 repeat protein
Position: -40 Score: 4.8 Sequence: TTGACATTGAAAATTAT Position: -34 Score: 5.2 Sequence: TTGAAAATTATTTTCAA Locus tag: DVU0273 Name: null Funciton: conserved hypothetical protein
	DVU0273		conserved hypothetical protein
Position: -57 Score: 4.9 Sequence: ATGATAATCACTTTCTT Position: -33 Score: 4.8 Sequence: ATGGCAATGATTATCAT Locus tag: DVU0163 Name: null Funciton: lipoprotein, putative Locus tag: DVU0164 Name: null Funciton: cation efflux family protein
	DVU0163		lipoprotein, putative
	DVU0164		cation efflux family protein
Position: -262 Score: 4.8 Sequence: CTGATAATGATTATCTT Locus tag: DVU2324 Name: copA Funciton: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4)
	DVU2324	copA	Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4)
Position: -199 Score: 3.7 Sequence: GTGATGTGCATTTTTAT Position: -181 Score: 4.3 Sequence: TTGAAAACAAAAATCAA Position: -175 Score: 4.4 Sequence: ACAAAAATCAATTTCAA Locus tag: DVU2680 Name: fld Funciton: Flavodoxin, iron-repressed
	DVU2680	fld	Flavodoxin, iron-repressed

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Fur in Desulfovibrio vulgaris Hildenborough

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --