Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Fur in Desulfovibrio vulgaris Hildenborough

Properties
Regulator type: Transcription factor
TF locus tag: DVU0942
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Regulog: Fur - Desulfovibrionales
Statistics of regulated genes:
- Genes 34
- Operons 13
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 193 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -263
Score: 5.4
Sequence: TTGACTTTGATTTTCAC
Position: -257
Score: 5.5
Sequence: TTGATTTTCACTTTCAT
Locus tag: DVU2378
Name: foxR
Funciton: transcriptional regulator, AraC family
Locus tag: DVU2379
Name: pqqL
Funciton: peptidase, M16 family, putative
Locus tag: DVU2380
Name: atpX
Funciton: ABC transporter, ATP-binding protein
Locus tag: DVU2381
Name: null
Funciton: conserved hypothetical protein
Locus tag: DVU2382
Name: null
Funciton: conserved domain protein
Locus tag: DVU2383
Name: null
Funciton: tonB dependent receptor domain protein
Locus tag: DVU2384
Name: null
Funciton: ABC transporter, periplasmic substrate-binding protein
Locus tag: DVU2385
Name: null
Funciton: ABC transporter, permease protein
Locus tag: DVU2386
Name: oppC
Funciton: ABC transporter, permease protein
Locus tag: DVU2387
Name: null
Funciton: ABC transporter, ATP-binding protein
Locus tag: DVU2388
Name: tolQ-1
Funciton: tolQ protein
Locus tag: DVU2389
Name: tolR
Funciton: biopolymer transport protein, ExbD/TolR family
Locus tag: DVU2390
Name: null
Funciton: TonB domain protein
DVU2378
foxR
transcriptional regulator, AraC family
DVU2379
pqqL
peptidase, M16 family, putative
DVU2380
atpX
ABC transporter, ATP-binding protein
DVU2381
conserved hypothetical protein
DVU2382
conserved domain protein
DVU2383
tonB dependent receptor domain protein
DVU2384
ABC transporter, periplasmic substrate-binding protein
DVU2385
ABC transporter, permease protein
DVU2386
oppC
ABC transporter, permease protein
DVU2387
ABC transporter, ATP-binding protein
DVU2388
tolQ-1
tolQ protein
DVU2389
tolR
biopolymer transport protein, ExbD/TolR family
DVU2390
TonB domain protein
Position: -59
Score: 4.5
Sequence: TTGATAAAGAAAATCAA
Locus tag: DVU2572
Name: feoA
Funciton: Ferrous iron transport protein A
Locus tag: DVU2571
Name: feoB
Funciton: Ferrous iron transport protein B
Locus tag: DVU2570
Name: pleD
Funciton: GGDEF domain/HAMP domain protein
DVU2572
feoA
Ferrous iron transport protein A
DVU2571
feoB
Ferrous iron transport protein B
DVU2570
pleD
GGDEF domain/HAMP domain protein
Position: -94
Score: 5.7
Sequence: TTGACAATCATTTTCAT
Locus tag: DVU2574
Name: feoA
Funciton: ferrous iron transporter component feoA
Locus tag: DVU2573
Name: null
Funciton: hypothetical protein
DVU2574
feoA
ferrous iron transporter component feoA
DVU2573
hypothetical protein
Position: -86
Score: 4.9
Sequence: TTGATTTAGATTTTCAA
Position: -80
Score: 4.8
Sequence: TAGATTTTCAATTTCAG
Position: -74
Score: 4.7
Sequence: TTCAATTTCAGTATCAA
Locus tag: DVU3330
Name: null
Funciton: hypothetical iron-regulated P-type ATPase
Locus tag: DVU3331
Name: null
Funciton: hypothetical protein
Locus tag: DVU3332
Name: null
Funciton: Probable cation-transporting P-type ATPase C (EC 3.6.3.-) (Metal-transporting ATPase Mta72)
Locus tag: DVU3333
Name: null
Funciton: hypothetical protein
DVU3330
hypothetical iron-regulated P-type ATPase
DVU3331
hypothetical protein
DVU3332
Probable cation-transporting P-type ATPase C (EC 3.6.3.-) (Metal-transporting ATPase Mta72)
DVU3333
hypothetical protein
Position: -120
Score: 4.5
Sequence: TTGATACTGAAATTGAA
Position: -114
Score: 4.7
Sequence: CTGAAATTGAAAATCTA
Position: -108
Score: 4.8
Sequence: TTGAAAATCTAAATCAA
Locus tag: DVU3328
Name: null
Funciton: hypothetical protein
DVU3328
hypothetical protein
Position: -35
Score: 5.3
Sequence: TTGACTTTGAAAATCAT
Position: -29
Score: 5.4
Sequence: TTGAAAATCATAATCAA
Locus tag: DVU0763
Name: gdp
Funciton: diguanylate cyclase
DVU0763
gdp
diguanylate cyclase
Position: -94
Score: 5.2
Sequence: TTGACAATGATTTTCTT
Position: -88
Score: 5.1
Sequence: ATGATTTTCTTTTTCAA
Locus tag: DVU3123
Name: hdd
Funciton: GAF domain/HD domain protein
DVU3123
hdd
GAF domain/HD domain protein
Position: -159
Score: 5.2
Sequence: ATGAAAATGATTGTCAA
Locus tag: DVU2575
Name: null
Funciton: peptidase, M20/M25/M40 family
Locus tag: DVU2576
Name: oppD
Funciton: oligopeptide ABC transporter, ATP-binding protein
DVU2575
peptidase, M20/M25/M40 family
DVU2576
oppD
oligopeptide ABC transporter, ATP-binding protein
Position: -56
Score: 5.3
Sequence: TTGACATTGATTTTCGT
Position: -50
Score: 5.1
Sequence: TTGATTTTCGTTTTCAA
Locus tag: DVU0304
Name: null
Funciton: hypothetical protein
Locus tag: DVU0303
Name: null
Funciton: Tetratricopeptide TPR_2 repeat protein
DVU0304
hypothetical protein
DVU0303
Tetratricopeptide TPR_2 repeat protein
Position: -40
Score: 4.8
Sequence: TTGACATTGAAAATTAT
Position: -34
Score: 5.2
Sequence: TTGAAAATTATTTTCAA
Locus tag: DVU0273
Name: null
Funciton: conserved hypothetical protein
DVU0273
conserved hypothetical protein
Position: -57
Score: 4.9
Sequence: ATGATAATCACTTTCTT
Position: -33
Score: 4.8
Sequence: ATGGCAATGATTATCAT
Locus tag: DVU0163
Name: null
Funciton: lipoprotein, putative
Locus tag: DVU0164
Name: null
Funciton: cation efflux family protein
DVU0163
lipoprotein, putative
DVU0164
cation efflux family protein
Position: -262
Score: 4.8
Sequence: CTGATAATGATTATCTT
Locus tag: DVU2324
Name: copA
Funciton: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4)
DVU2324
copA
Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4)
Position: -199
Score: 3.7
Sequence: GTGATGTGCATTTTTAT
Position: -181
Score: 4.3
Sequence: TTGAAAACAAAAATCAA
Position: -175
Score: 4.4
Sequence: ACAAAAATCAATTTCAA
Locus tag: DVU2680
Name: fld
Funciton: Flavodoxin, iron-repressed
DVU2680
fld
Flavodoxin, iron-repressed
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise