Regulon of Fur in Desulfovibrio desulfuricans G20

Properties
Regulator type:	Transcription factor
TF locus tag:	Dde_2676
Regulator family:	FUR
Regulation mode:	repressor
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Regulog:	Fur - Desulfovibrionales
Statistics of regulated genes:
- Genes	50
- Operons	21
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 193 sites [see more]

Member of regulog collections

By taxonomy - Desulfovibrionales
By trascription factor - FUR
By TF family - FUR
By effector - Iron ion, (Fe2+)
By pathway - Iron homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -120 Score: 3.7 Sequence: CTGACTTTCGTCATCAC Position: 34 Score: 3.6 Sequence: ATGTCATTGAAGTTCTG Locus tag: Dde_0133 Name: bfr Funciton: Bacterioferritin
	Dde_0133	bfr	Bacterioferritin
Position: -76 Score: 5.3 Sequence: ATGAAAATAATTTTCAT Locus tag: Dde_0753 Name: fur3 Funciton: ferric uptake regulation protein
	Dde_0753	fur3	ferric uptake regulation protein
Position: -48 Score: 4.7 Sequence: ATGAGTTTCAGAATCAA Position: -42 Score: 4.5 Sequence: TTCAGAATCAAAATCAA Locus tag: Dde_2152 Name: null Funciton: hypothetical protein Locus tag: Dde_2153 Name: null Funciton: transport protein TolQ-like Locus tag: Dde_2154 Name: null Funciton: biopolymer transport protein (ExbB)-like Locus tag: Dde_2155 Name: null Funciton: biopolymer transport protein (ExbD2) Locus tag: Dde_2156 Name: null Funciton: TonB-like Locus tag: Dde_2157 Name: null Funciton: TPR repeat-containing protein
	Dde_2152		hypothetical protein
	Dde_2153		transport protein TolQ-like
	Dde_2154		biopolymer transport protein (ExbB)-like
	Dde_2155		biopolymer transport protein (ExbD2)
	Dde_2156		TonB-like
	Dde_2157		TPR repeat-containing protein
Position: -34 Score: 4.8 Sequence: TTGAAAATGAGACTCAT Locus tag: Dde_0447 Name: null Funciton: TonB dependent receptor domain-containing protein Locus tag: Dde_0448 Name: null Funciton: ABC transporter, periplasmic substrate-binding protein Locus tag: Dde_0449 Name: null Funciton: putative peptide transport system permease protein Locus tag: Dde_0450 Name: oppC Funciton: putative peptide transport system permease protein Locus tag: Dde_0451 Name: null Funciton: ATPase Locus tag: Dde_0452 Name: null Funciton: hypothetical protein Locus tag: Dde_0453 Name: null Funciton: biopolymer transport proteins-like Locus tag: Dde_0454 Name: null Funciton: biopolymer transport proteins-like Locus tag: Dde_0455 Name: null Funciton: biopolymer transport protein (ExbD2) Locus tag: Dde_0456 Name: null Funciton: TonB-like Locus tag: Dde_0457 Name: null Funciton: TPR repeat-containing protein
	Dde_0447		TonB dependent receptor domain-containing protein
	Dde_0448		ABC transporter, periplasmic substrate-binding protein
	Dde_0449		putative peptide transport system permease protein
	Dde_0450	oppC	putative peptide transport system permease protein
	Dde_0451		ATPase
	Dde_0452		hypothetical protein
	Dde_0453		biopolymer transport proteins-like
	Dde_0454		biopolymer transport proteins-like
	Dde_0455		biopolymer transport protein (ExbD2)
	Dde_0456		TonB-like
	Dde_0457		TPR repeat-containing protein
Position: -55 Score: 5.2 Sequence: ATGAAAATAAATTTCAT Position: -49 Score: 5.1 Sequence: ATAAATTTCATTTTCAT Locus tag: Dde_0444 Name: pqqL Funciton: M16 family peptidase putative Locus tag: Dde_0445 Name: null Funciton: ATPase Locus tag: Dde_0446 Name: null Funciton: hypothetical protein
	Dde_0444	pqqL	M16 family peptidase putative
	Dde_0445		ATPase
	Dde_0446		hypothetical protein
Position: -262 Score: 5.6 Sequence: TTGACAATGAATTTCAT Position: -256 Score: 5.4 Sequence: ATGAATTTCATTTTCAC Locus tag: Dde_3667 Name: fld Funciton: Flavodoxin, iron-repressed
	Dde_3667	fld	Flavodoxin, iron-repressed
Position: -53 Score: 5.2 Sequence: TTGACAATCATTCTCAT Locus tag: Dde_2673 Name: feoA Funciton: ferrous iron transporter component feoA Locus tag: Dde_2672 Name: null Funciton: hypothetical protein
	Dde_2673	feoA	ferrous iron transporter component feoA
	Dde_2672		hypothetical protein
Position: -64 Score: 4.8 Sequence: ATGAGAAGGATTTTCAA Position: -58 Score: 4.7 Sequence: AGGATTTTCAATTTCAC Locus tag: Dde_2670 Name: feoA Funciton: Ferrous iron transport protein A Locus tag: Dde_2669 Name: feoB Funciton: Ferrous iron transport protein B
	Dde_2670	feoA	Ferrous iron transport protein A
	Dde_2669	feoB	Ferrous iron transport protein B
Position: -106 Score: 4.8 Sequence: GTGATATTGAAATTCTT Locus tag: Dde_1151 Name: hdd Funciton: GAF domain/HD domain protein
	Dde_1151	hdd	GAF domain/HD domain protein
Position: -83 Score: 5.8 Sequence: TTGACATTGATTTTCAT Position: -77 Score: 5.5 Sequence: TTGATTTTCATTTTCAC Locus tag: Dde_0283 Name: null Funciton: hypothetical protein Locus tag: Dde_0282 Name: null Funciton: Tetratricopeptide TPR_2 repeat protein
	Dde_0283		hypothetical protein
	Dde_0282		Tetratricopeptide TPR_2 repeat protein
Position: -126 Score: 4.7 Sequence: TTGACATCGATTCTCAA Locus tag: Dde_1312 Name: null Funciton: mercuric transport protein periplasmic component
	Dde_1312		mercuric transport protein periplasmic component
Position: -121 Score: 5.4 Sequence: TTGATTTTGAGTTTCAT Position: -115 Score: 5.4 Sequence: TTGAGTTTCATATTCAT Locus tag: Dde_3048 Name: gdp Funciton: diguanylate cyclase Locus tag: Dde_3047 Name: null Funciton: serine phosphatase Locus tag: Dde_3046 Name: null Funciton: hypothetical protein Locus tag: Dde_3045 Name: null Funciton: Fe-S OXIDOREDUCTASE (1.8.-.-)
	Dde_3048	gdp	diguanylate cyclase
	Dde_3047		serine phosphatase
	Dde_3046		hypothetical protein
	Dde_3045		Fe-S OXIDOREDUCTASE (1.8.-.-)
Position: -190 Score: 5.4 Sequence: TTGAAAGTGAATTTCAA Position: -184 Score: 4.7 Sequence: GTGAATTTCAATTACAA Locus tag: Dde_2805 Name: null Funciton: prophage antirepressor-like Locus tag: Dde_2806 Name: null Funciton: rha protein, phage phi-80 Locus tag: Dde_2807 Name: null Funciton: nuclease (SNase domain protein)
	Dde_2805		prophage antirepressor-like
	Dde_2806		rha protein, phage phi-80
	Dde_2807		nuclease (SNase domain protein)
Position: -284 Score: 4.6 Sequence: CTGGTTTTCATTATCAT Position: -280 Score: 4.1 Sequence: TTCAGACTGGTTTTCAT Locus tag: Dde_2677 Name: pep Funciton: metalloprotease, iron-related Locus tag: Dde_2676 Name: fur Funciton: Ferric uptake regulator, Fur family
	Dde_2677	pep	metalloprotease, iron-related
	Dde_2676	fur	Ferric uptake regulator, Fur family
Position: -29 Score: 5.4 Sequence: TTGAAAGTGAATTTCAA Position: -23 Score: 4.7 Sequence: GTGAATTTCAATTACAA Locus tag: Dde_1733 Name: null Funciton: hypothetical protein
	Dde_1733		hypothetical protein
Position: -185 Score: 4.7 Sequence: GCGAAAATGATTTTCAA Position: -179 Score: 5.2 Sequence: ATGATTTTCAATGTCAA Locus tag: Dde_1609 Name: null Funciton: amino acid adenylation Locus tag: Dde_1608 Name: null Funciton: amino acid adenylation
	Dde_1609		amino acid adenylation
	Dde_1608		amino acid adenylation
Position: -31 Score: 4.4 Sequence: TTGAGAATCGATGTCAA Locus tag: Dde_1313 Name: copA Funciton: Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4)
	Dde_1313	copA	Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4)
Position: -100 Score: 4.9 Sequence: CTGAAATTGGTTTTCAA Position: -94 Score: 4.6 Sequence: TTGGTTTTCAATATCAG Position: -31 Score: 4.9 Sequence: TTGAAAATGAAATTTAT Locus tag: Dde_0483 Name: null Funciton: ATPase Locus tag: Dde_0484 Name: null Funciton: hypothetical protein Locus tag: Dde_0485 Name: null Funciton: hypothetical protein
	Dde_0483		ATPase
	Dde_0484		hypothetical protein
	Dde_0485		hypothetical protein
Position: -105 Score: 3.4 Sequence: ATGAAAATGAATCGTTT Position: -56 Score: 4.2 Sequence: CTGATGATGAAATTCTT Position: -50 Score: 4.6 Sequence: ATGAAATTCTTTATCGA Locus tag: Dde_3146 Name: null Funciton: hypothetical protein
	Dde_3146		hypothetical protein
Position: -122 Score: 3.4 Sequence: CAGAAAATAATATTCTG Position: -64 Score: 5.4 Sequence: TTGACATTGAAAATCAT Position: -58 Score: 5 Sequence: TTGAAAATCATTTTCGC Locus tag: Dde_1611 Name: null Funciton: Transcriptional regulator, AraC family
	Dde_1611		Transcriptional regulator, AraC family
Position: -97 Score: 3.6 Sequence: ACAATAACGAAATTCAT Position: -91 Score: 5 Sequence: ACGAAATTCATTATCAT Position: -85 Score: 3.4 Sequence: TTCATTATCATAATGTG Position: -71 Score: 3.5 Sequence: GTGGGTTTCATTGTGAT Locus tag: Dde_1239 Name: null Funciton: hypothetical protein
	Dde_1239		hypothetical protein

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Fur in Desulfovibrio desulfuricans G20

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --