Regulon of Fur in Desulfovibrio magneticus RS-1
| Regulator type: | Transcription factor |
| TF locus tag: | DMR_43000 |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Regulog: | Fur - Desulfovibrionales |
| Statistics of regulated genes: | |
| - Genes | 19 |
| - Operons | 12 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfovibrionales
- By trascription factor - FUR
- By TF family - FUR
- By effector - Iron ion, (Fe2+)
- By pathway - Iron homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -35
Score: 4.9 Sequence: ATGAAATTGATTATCGC
Locus tag: DMR_04510
Name: null Funciton: putative ABC transporter ATP-binding protein
Locus tag: DMR_04500
Name: null Funciton: hypothetical membrane protein
Locus tag: DMR_04490
Name: null Funciton: hypothetical membrane protein |
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putative ABC transporter ATP-binding protein
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hypothetical membrane protein
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hypothetical membrane protein
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Position: -92
Score: 4.9 Sequence: TTGACACTGAAAATCAT
Position: -86
Score: 5.4 Sequence: CTGAAAATCATTTTCAT
Locus tag: DMR_03500
Name: fld Funciton: Flavodoxin, iron-repressed |
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fld
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Flavodoxin, iron-repressed
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Position: -50
Score: 5.2 Sequence: TTGACAATCATTCTCAT
Locus tag: DMR_19550
Name: feoA Funciton: ferrous iron transporter component feoA
Locus tag: DMR_19560
Name: feoA Funciton: Ferrous iron transport protein A |
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feoA
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ferrous iron transporter component feoA
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feoA
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Ferrous iron transport protein A
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Position: -108
Score: 5.2 Sequence: ATGATTTTGAATGTCAT
Locus tag: DMR_44300
Name: null Funciton: hypothetical protein
Locus tag: DMR_44310
Name: null Funciton: lipoprotein, putative |
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hypothetical protein
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lipoprotein, putative
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Position: 0
Score: 4.7 Sequence: ATGAGTCTGAAATTCAA
Position: 6
Score: 5.1 Sequence: CTGAAATTCAAGTTCAT
Locus tag: DMR_40240
Name: null Funciton: methyl-accepting chemotaxis protein |
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methyl-accepting chemotaxis protein
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Position: -92
Score: 4.8 Sequence: ATGAAAATGATACTCAG
Position: -86
Score: 4.6 Sequence: ATGATACTCAGAATCAT
Locus tag: DMR_26840
Name: null Funciton: hypothetical membrane protein |
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hypothetical membrane protein
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Position: -165
Score: 5.4 Sequence: TTGAAATTGAGATTCAA
Position: -159
Score: 5.2 Sequence: TTGAGATTCAATGTCAA
Locus tag: DMR_12770
Name: null Funciton: putative small multidrug resistance protein |
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putative small multidrug resistance protein
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Position: -182
Score: 4.7 Sequence: TTGACATTGATATTGAG
Position: -176
Score: 5.4 Sequence: TTGATATTGAGTATCAT
Locus tag: DMR_11980
Name: feoA Funciton: ferrous iron transport protein A
Locus tag: DMR_11990
Name: feoB Funciton: ferrous iron transport protein B |
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feoA
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ferrous iron transport protein A
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feoB
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ferrous iron transport protein B
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Position: -98
Score: 5.8 Sequence: TTGACATTGATTTTCAT
Position: -92
Score: 4.8 Sequence: TTGATTTTCATTATCGC
Locus tag: DMR_07790
Name: null Funciton: hypothetical protein
Locus tag: DMR_07780
Name: null Funciton: hypothetical protein |
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hypothetical protein
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hypothetical protein
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Position: -77
Score: 4.9 Sequence: GTGGTATTGATTTTCAT
Position: -71
Score: 5.7 Sequence: TTGATTTTCATTTTCAA
Locus tag: DMR_06220
Name: null Funciton: hypothetical protein |
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hypothetical protein
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Position: -69
Score: 5.6 Sequence: TTGACAATGATTTTCAA
Position: -63
Score: 4.8 Sequence: ATGATTTTCAATTTCGC
Locus tag: DMR_03560
Name: null Funciton: hypothetical protein |
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hypothetical protein
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Position: 12
Score: 4.5 Sequence: ATGAAAATGCTTTTCGT
Locus tag: DMR_16660
Name: null Funciton: hypothetical protein
Locus tag: DMR_16670
Name: null Funciton: hypothetical protein |
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hypothetical protein
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hypothetical protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |