Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Rex in Desulfovibrio salexigens DSM 2638

Properties
Regulator type: Transcription factor
TF locus tag: Desal_3723
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Regulog: Rex - Desulfovibrionales
Statistics of regulated genes:
- Genes 37
- Operons 12
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 107 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -74
Score: 4.1
Sequence: CTTGTGAAGGTTTGCGCAAA
Locus tag: Desal_3727
Name: atpI1
Funciton: ATP synthase protein I
Locus tag: Desal_3726
Name: atpI2
Funciton: ATP synthase protein I2
Locus tag: Desal_3725
Name: atpB
Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: Desal_3724
Name: atpE
Funciton: ATP synthase C chain (EC 3.6.3.14)
Desal_3727
atpI1
ATP synthase protein I
Desal_3726
atpI2
ATP synthase protein I2
Desal_3725
atpB
ATP synthase A chain (EC 3.6.3.14)
Desal_3724
atpE
ATP synthase C chain (EC 3.6.3.14)
Position: -242
Score: 4.6
Sequence: CTTGACATTTCTTTCACAAA
Locus tag: Desal_0228
Name: sat
Funciton: Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
Desal_0228
sat
Sulfate adenylyltransferase, dissimilatory-type (EC 2.7.7.4)
Position: -112
Score: 4.8
Sequence: TTTGTGAAAAGTTTCATATT
Locus tag: Desal_1042
Name: qrcA
Funciton: cytochrome c class III family protein
Locus tag: Desal_1043
Name: qrcB
Funciton: molybdopterin oxidoreductase, molybdopterin-binding subunit, putative
Locus tag: Desal_1044
Name: qrcC
Funciton: molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit, putative
Locus tag: Desal_1045
Name: qrcD
Funciton: molybdopterin oxidoreductase, transmembrane subunit, putative
Desal_1042
qrcA
cytochrome c class III family protein
Desal_1043
qrcB
molybdopterin oxidoreductase, molybdopterin-binding subunit, putative
Desal_1044
qrcC
molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit, putative
Desal_1045
qrcD
molybdopterin oxidoreductase, transmembrane subunit, putative
Position: -57
Score: 4.5
Sequence: ATTGTGATAGAAGACACAAG
Locus tag: Desal_2248
Name: ppaC
Funciton: Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1)
Desal_2248
ppaC
Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1)
Position: -275
Score: 4.7
Sequence: TTTGTGCAAAAATTACCAAA
Position: -144
Score: 4.7
Sequence: TGTGTGAAAATTTTCCCAAT
Locus tag: Desal_2447
Name: null
Funciton: cytochrome c class III
Desal_2447
cytochrome c class III
Position: -173
Score: 5
Sequence: CTTGGGAATTAAAGCACAAA
Locus tag: Desal_2181
Name: null
Funciton: Sulfate transporter family protein
Desal_2181
Sulfate transporter family protein
Position: 21
Score: 4.7
Sequence: TTCGTGAAAATGTGCACAGG
Locus tag: Desal_2050
Name: hysB
Funciton: periplasmic [NiFeSe] hydrogenase, small subunit
Locus tag: Desal_2049
Name: hysA
Funciton: periplasmic [NiFeSe] hydrogenase, large subunit, selenocysteine-containing
Desal_2050
hysB
periplasmic [NiFeSe] hydrogenase, small subunit
Desal_2049
hysA
periplasmic [NiFeSe] hydrogenase, large subunit, selenocysteine-containing
Position: -39
Score: 5.1
Sequence: TTTGTGAAATTTGTTACTAA
Locus tag: Desal_1973
Name: adk
Funciton: Adenylate kinase (EC 2.7.4.3)
Desal_1973
adk
Adenylate kinase (EC 2.7.4.3)
Position: -146
Score: 4.7
Sequence: CTTGTTCTAAATTTCACTTT
Locus tag: Desal_0229
Name: apsB
Funciton: Adenylylsulfate reductase beta-subunit (EC 1.8.99.2)
Locus tag: Desal_0230
Name: apsA
Funciton: Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2)
Locus tag: Desal_0231
Name: qmoA
Funciton: quinone-interacting membrane-bound oxidoreductase complex subunit A
Locus tag: Desal_0232
Name: qmoB
Funciton: quinone-interacting membrane-bound oxidoreductase complex subunit B
Locus tag: Desal_0233
Name: qmoC
Funciton: quinone-interacting membrane-bound oxidoreductase complex subunit C
Locus tag: Desal_0234
Name: null
Funciton: hypothetical protein
Desal_0229
apsB
Adenylylsulfate reductase beta-subunit (EC 1.8.99.2)
Desal_0230
apsA
Adenylylsulfate reductase alpha-subunit (EC 1.8.99.2)
Desal_0231
qmoA
quinone-interacting membrane-bound oxidoreductase complex subunit A
Desal_0232
qmoB
quinone-interacting membrane-bound oxidoreductase complex subunit B
Desal_0233
qmoC
quinone-interacting membrane-bound oxidoreductase complex subunit C
Desal_0234
hypothetical protein
Position: -177
Score: 4.2
Sequence: GTTGTGTTTTTTTTCACTTA
Locus tag: Desal_0787
Name: dsrA
Funciton: Sulfite reductase alpha subunit (EC 1.8.99.1)
Locus tag: Desal_0788
Name: dsrB
Funciton: Sulfite reductase beta subunit (EC 1.8.99.1)
Locus tag: Desal_0789
Name: dsrD
Funciton: Dissimilatory sulfite reductase D
Desal_0787
dsrA
Sulfite reductase alpha subunit (EC 1.8.99.1)
Desal_0788
dsrB
Sulfite reductase beta subunit (EC 1.8.99.1)
Desal_0789
dsrD
Dissimilatory sulfite reductase D
Position: -150
Score: 4.5
Sequence: TTAGTTAAAAAAATAACAAG
Position: -36
Score: 4.8
Sequence: TTTGGACAAAAATTCACAAC
Locus tag: Desal_3459
Name: atpF1
Funciton: ATP synthase B' chain (EC 3.6.3.14)
Locus tag: Desal_3458
Name: atpF2
Funciton: ATP synthase F0, B subunit
Locus tag: Desal_3457
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: Desal_3456
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: Desal_3455
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: Desal_3454
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: Desal_3453
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
Desal_3459
atpF1
ATP synthase B' chain (EC 3.6.3.14)
Desal_3458
atpF2
ATP synthase F0, B subunit
Desal_3457
atpH
ATP synthase delta chain (EC 3.6.3.14)
Desal_3456
atpA
ATP synthase alpha chain (EC 3.6.3.14)
Desal_3455
atpG
ATP synthase gamma chain (EC 3.6.3.14)
Desal_3454
atpD
ATP synthase beta chain (EC 3.6.3.14)
Desal_3453
atpC
ATP synthase epsilon chain (EC 3.6.3.14)
Position: -118
Score: 3.9
Sequence: AGTGTGACAGAATTCACATT
Locus tag: Desal_0187
Name: null
Funciton: hypothetical protein
Locus tag: Desal_0186
Name: dsrM
Funciton: Sulfite reduction-associated complex DsrMKJOP protein DsrM (= HmeC)
Locus tag: Desal_0185
Name: dsrK
Funciton: Sulfite reduction-associated complex DsrMKJOP protein DsrK (=HmeD)
Locus tag: Desal_0184
Name: dsrJ
Funciton: Sulfite reduction-associated complex DsrMKJOP multiheme protein DsrJ (=HmeF)
Locus tag: Desal_0183
Name: dsrO
Funciton: Sulfite reduction-associated complex DsrMKJOP iron-sulfur protein DsrO (=HmeA)
Locus tag: Desal_0182
Name: dsrP
Funciton: Sulfite reduction-associated complex DsrMKJOP protein DsrP (= HmeB)
Desal_0187
hypothetical protein
Desal_0186
dsrM
Sulfite reduction-associated complex DsrMKJOP protein DsrM (= HmeC)
Desal_0185
dsrK
Sulfite reduction-associated complex DsrMKJOP protein DsrK (=HmeD)
Desal_0184
dsrJ
Sulfite reduction-associated complex DsrMKJOP multiheme protein DsrJ (=HmeF)
Desal_0183
dsrO
Sulfite reduction-associated complex DsrMKJOP iron-sulfur protein DsrO (=HmeA)
Desal_0182
dsrP
Sulfite reduction-associated complex DsrMKJOP protein DsrP (= HmeB)
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