Regulon of NifA-1 in Desulfovibrio salexigens DSM 2638

Properties
Regulator type:	Transcription factor
TF locus tag:	Desal_1531
Regulator family:	Fis
Regulation mode:
Biological process:	Nitrogen assimilation
Effector:
Regulog:	NifA-1 - Desulfovibrionales
Statistics of regulated genes:
- Genes	22
- Operons	10
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 101 sites [see more]

Member of regulog collections

By taxonomy - Desulfovibrionales
By TF family - Fis
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -289 Score: 4.4 Sequence: CTGAAAAAATTGTCAA Position: -185 Score: 4.7 Sequence: TTTACCTTTTTGTAAT Position: -134 Score: 4.4 Sequence: AATACATTTTTGTAAT Locus tag: Desal_3066 Name: amtB2 Funciton: Ammonium transporter Locus tag: Desal_3067 Name: glnB2 Funciton: Nitrogen regulatory protein P-II
	Desal_3066	amtB2	Ammonium transporter
	Desal_3067	glnB2	Nitrogen regulatory protein P-II
Position: -153 Score: 3.6 Sequence: TTAACAAAAATGATTT Position: -9 Score: 3.6 Sequence: TGTACAAAAGTGATAA Locus tag: Desal_3370 Name: null Funciton: amino acid ABC transporter, ATP-binding protein Locus tag: Desal_3369 Name: null Funciton: amino acid ABC transporter, amino acid-binding protein Locus tag: Desal_3368 Name: null Funciton: Glutamine-binding periplasmic protein/glutamine transport system permease protein
	Desal_3370		amino acid ABC transporter, ATP-binding protein
	Desal_3369		amino acid ABC transporter, amino acid-binding protein
	Desal_3368		Glutamine-binding periplasmic protein/glutamine transport system permease protein
Position: -276 Score: 4.7 Sequence: TATACAATTTTGTAAC Position: -225 Score: 4.8 Sequence: ATTACATTTTTGTAAC Position: -182 Score: 4.6 Sequence: TCTACATTTTTGTAAG Locus tag: Desal_2290 Name: glnN Funciton: Glutamine synthetase type III, GlnN (EC 6.3.1.2)
	Desal_2290	glnN	Glutamine synthetase type III, GlnN (EC 6.3.1.2)
Position: -358 Score: 3.9 Sequence: TTGTCTTTTTTGTATA Position: -197 Score: 4.5 Sequence: TGTACATAAATGGAAA Locus tag: Desal_1519 Name: glnQ Funciton: ABC-type polar amino acid transport system, ATPase component Locus tag: Desal_1520 Name: null Funciton: amino acid ABC transporter, periplasmic amino acid-binding protein Locus tag: Desal_1521 Name: gltJ Funciton: amino acid ABC transproter, permease protein, His/Glu/Gln/Arg/opine family Locus tag: Desal_1522 Name: null Funciton: amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family
	Desal_1519	glnQ	ABC-type polar amino acid transport system, ATPase component
	Desal_1520		amino acid ABC transporter, periplasmic amino acid-binding protein
	Desal_1521	gltJ	amino acid ABC transproter, permease protein, His/Glu/Gln/Arg/opine family
	Desal_1522		amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family
Position: -194 Score: 3.8 Sequence: TTACAAATATTGTTAA Position: -92 Score: 4.8 Sequence: TTTACAATATTGATAA Position: -35 Score: 4.3 Sequence: CTAACAGTATTGAAAA Locus tag: Desal_3587 Name: DVU0671 Funciton: Ferredoxin-dependent glutamate synthase
	Desal_3587	DVU0671	Ferredoxin-dependent glutamate synthase
Position: -339 Score: 3.9 Sequence: TTGCCAAAATTGTTTT Locus tag: Desal_3280 Name: null Funciton: putative glutamate synthase, large subunit (domain 1) Locus tag: Desal_3279 Name: null Funciton: glutamate synthase, iron-sulfur cluster-binding subunit, putative Locus tag: Desal_3278 Name: null Funciton: glutamate synthase alpha subunit domain protein
	Desal_3280		putative glutamate synthase, large subunit (domain 1)
	Desal_3279		glutamate synthase, iron-sulfur cluster-binding subunit, putative
	Desal_3278		glutamate synthase alpha subunit domain protein
Position: -138 Score: 4.2 Sequence: TTTCCATTAATGTTCA Position: -108 Score: 4.8 Sequence: TTTACATAAATGTGAA Locus tag: Desal_0518 Name: nifA-2 Funciton: transcriptional regulator, NifA, Fis Family
	Desal_0518	nifA-2	transcriptional regulator, NifA, Fis Family
Position: -140 Score: 4.4 Sequence: CTGTCAATTTTGAAAA Locus tag: Desal_1531 Name: nifA-1 Funciton: transcriptional regulator, NifA subfamily, Fis Family
	Desal_1531	nifA-1	transcriptional regulator, NifA subfamily, Fis Family
Position: -231 Score: 3.9 Sequence: ATTGCAAAAAAGTCAA Position: -76 Score: 4.5 Sequence: TTGACCTTTTTGTCAG Locus tag: Desal_1534 Name: null Funciton: hypothetical protein Locus tag: Desal_1533 Name: iorA Funciton: indolepyruvate ferredoxin oxidoreductase, alpha subunit, putative Locus tag: Desal_1532 Name: iorB Funciton: indolepyruvate ferredoxin oxidoreductase, beta subunit, putative
	Desal_1534		hypothetical protein
	Desal_1533	iorA	indolepyruvate ferredoxin oxidoreductase, alpha subunit, putative
	Desal_1532	iorB	indolepyruvate ferredoxin oxidoreductase, beta subunit, putative
Position: -204 Score: 4 Sequence: TTTCCAATTATGTTTT Position: -153 Score: 4 Sequence: TTTTCAGTTTTGGCAC Position: -91 Score: 3.7 Sequence: TGTCTAAAATTGTAAA Position: -50 Score: 4 Sequence: GAGACGAAATTGTAAA Locus tag: Desal_3438 Name: amtB Funciton: Ammonium transporter Locus tag: Desal_3437 Name: glnB Funciton: Nitrogen regulatory protein P-II Locus tag: Desal_3436 Name: glnD Funciton: UTP-GlnB uridylyltransferase, GlnD
	Desal_3438	amtB	Ammonium transporter
	Desal_3437	glnB	Nitrogen regulatory protein P-II
	Desal_3436	glnD	UTP-GlnB uridylyltransferase, GlnD

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of NifA-1 in Desulfovibrio salexigens DSM 2638

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --