Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Profile of regulator NifA-1 in Desulfovibrionales

Properties
Regulator family: Fis
Regulation mode:
Biological process: Nitrogen assimilation
Effector:
Regulog: NifA-1 - Desulfovibrionales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Desulfohalobium retbaense DSM 5692
Dret_0402 DVU0671 -87 4.6 TTTACATTTTCGTAAC
Dret_2267 amtB -132 4.2 ATGCCATTTTTGACAA
Dret_2267 amtB -173 3.9 GTAACAAATTTGTCCA
Dret_0113 amtB2 -151 5 TTTTCAATTTTGTCAA
Dret_0113 amtB2 -270 4.5 ATTCCATTTTTGTAAC
Dret_0113 amtB2 -393 3.9 GTTTCAGAAATGGAAG
Dret_2389 glnA -141 5 TTGACAAAAATGAAAA
Dret_2389 glnA -182 4.5 TTTTCGTTTTTGTCAA
Dret_2389 glnA -173 3.9 TTGTCAATATTGGATC
Desulfomicrobium baculatum DSM 4028
Dbac_3049 amtB2 -176 4.7 TATACATAAATGTTAA
Dbac_1372 null -75 4.3 ATGACATTTCTGTCAT
Dbac_1496 glnN -208 4.6 TTTGCAAATTTGTAAT
Dbac_3048 amtB -387 4.5 TTTTCAATTTTGGAAG
Dbac_1496 glnN -328 4 TTGACATTTATGTGCA
Dbac_1504 null -38 5.1 TTTACAATAATGGCAA
Dbac_2819 glnA -89 4.6 TTTCCAATTTTGCAAA
Dbac_3049 amtB2 -284 4.5 CTTCCAAAATTGAAAA
Dbac_3049 amtB2 -64 3.7 TTAACAACTTTGGCAC
Dbac_1496 glnN -155 4.5 ATTTCAAAAATGTAAT
Dbac_1372 null -117 4.4 TCTACATTTTTGTCAT
Desulfovibrio desulfuricans G20
Dde_1814 gltB-1 -46 4.2 TAAACATTTTTGTCAC
Dde_1814 gltB-1 -254 4.9 ATTACAAAATTGTAAT
Dde_1814 gltB-1 -208 3.7 TTCTCAAAAATATAAA
Dde_1218 DVU0671 -198 3.7 ATTGCATTTTTCTCAA
Dde_0102 glnN -174 4.7 TAAACATTTATGTAAA
Dde_0102 glnN -216 4.1 TTAACAAAAAAGTTAA
Dde_1428 glnQ -253 5.1 TTTACAATTATGTAAC
Dde_1428 glnQ -59 3.7 TTGACAATTTTGAGCA
Dde_1428 glnQ 23 3.5 TATTCATAAATGGTAC
Dde_2763 null -139 4.5 ATAACAAATTTGTAAT
Dde_1634 null -99 4.9 TTGACATTTCTGTAAG
Dde_1218 DVU0671 -353 4.7 TTGACGTTTATGTCAA
Dde_3492 amtB2 -192 4.9 TTTACTTTTTTGTAAA
Dde_3492 amtB2 -160 5.2 TTGACATATATGTCAA
Dde_0104 glnA -140 4 TTTGCAAAAATGTGAT
Dde_2311 amtB -207 3.7 TTAACAAAATTGTGTT
Dde_2311 amtB -175 4.3 ATAACAAATATGTATA
Desulfovibrio magneticus RS-1
DMR_10730 glnN -236 4.4 TTTACATTATTGCTAG
DMR_10730 glnN -335 3.7 TTGACACAATTGTTTC
DMR_34890 amtB -158 4.4 GTTGCAAAAATGTCAA
Desulfovibrio salexigens DSM 2638
Desal_3587 DVU0671 -194 3.8 TTACAAATATTGTTAA
Desal_2290 glnN -276 4.7 TATACAATTTTGTAAC
Desal_3587 DVU0671 -92 4.8 TTTACAATATTGATAA
Desal_3587 DVU0671 -35 4.3 CTAACAGTATTGAAAA
Desal_1519 glnQ -358 3.9 TTGTCTTTTTTGTATA
Desal_1519 glnQ -197 4.5 TGTACATAAATGGAAA
Desal_3370 null -153 3.6 TTAACAAAAATGATTT
Desal_1531 nifA-1 -140 4.4 CTGTCAATTTTGAAAA
Desal_3280 null -339 3.9 TTGCCAAAATTGTTTT
Desal_2290 glnN -225 4.8 ATTACATTTTTGTAAC
Desal_2290 glnN -182 4.6 TCTACATTTTTGTAAG
Desal_1534 null -231 3.9 ATTGCAAAAAAGTCAA
Desal_1534 null -76 4.5 TTGACCTTTTTGTCAG
Desal_3066 amtB2 -134 4.4 AATACATTTTTGTAAT
Desal_3066 amtB2 -289 4.4 CTGAAAAAATTGTCAA
Desal_3066 amtB2 -185 4.7 TTTACCTTTTTGTAAT
Desal_3438 amtB -50 4 GAGACGAAATTGTAAA
Desal_3438 amtB -91 3.7 TGTCTAAAATTGTAAA
Desal_3438 amtB -204 4 TTTCCAATTATGTTTT
Desal_3438 amtB -153 4 TTTTCAGTTTTGGCAC
Desal_3370 null -9 3.6 TGTACAAAAGTGATAA
Desal_0518 nifA-2 -138 4.2 TTTCCATTAATGTTCA
Desal_0518 nifA-2 -108 4.8 TTTACATAAATGTGAA
Desulfovibrio vulgaris Hildenborough
DVU1823 gltB-1 -240 4.1 GTCTCAAAATTGTAAA
DVU0671 DVU0671 -355 4.8 GTTACATTTTTGTAAT
DVU0753 null -246 4.1 TTGACGTTTTTGAAAT
DVU0753 null -106 4.8 ATGACAGTTTTGTAAA
DVU1231 amtB -159 3.9 ACGACAAAAATGCAAA
DVU3290 null -230 4.2 TAGACAAAAATGTTAC
DVU3290 null -178 4 TTGCCATTTTTGATAT
DVU1258 glnN -275 4.7 TATACATTTTTGGAAA
DVU2343 glnQ -248 4.1 ATTACTTTTTTGTCAC
DVU2343 glnQ -403 3.7 TTGTCTTGTTTGTAAA
DVU1258 glnN -178 4.3 TTTACTATTTTGAAAG
DVU1258 glnN -230 4.6 ATTACAATAGTGTCAA
DVU1258 glnN -411 4.3 TTTACATATTTGATAC
DVU3392 glnA -176 3.9 TGAACAACATTGTCAA
DVU3392 glnA -135 4.8 CTTCCAATAATGTAAG
DVU1952 null -92 4.9 TTGACATTTCTGTAAG
Desulfovibrio vulgaris str. Miyazaki F
DvMF_2387 null -101 3.8 TTGCCGTTTTTGGAAT
DvMF_2387 null -176 4.1 GTGGCAAAAATGTAAT
DvMF_2387 null -153 4.2 AGTACAAATATGTAAT
DvMF_2528 nifA-2 -170 3.6 TATTCAAAAATGGTAT
DvMF_0546 gltB-1 -403 3.5 AGAACAAAAATGTTAT
DvMF_0866 amtB -175 3.9 TTACCAAAATGGAAAA
DvMF_0866 amtB -208 4.1 TTTACAAAAAAGAAAC
DvMF_1590 glnN -332 3.9 GTTACAAGTTTGCAAA
DvMF_2788 null -177 4.2 GAAACATTAATGTCAA
DvMF_2788 null -305 4.1 CTGACAATTTCGCAAA
DvMF_1590 glnN -54 4 GAAACAAATTTGTAAG
DvMF_1590 glnN -288 3.9 TGAACGAATTTGTAAA
DvMF_0866 amtB -176 4.3 GTTACCAAAATGGAAA
DvMF_3151 glnQ -67 4.7 CTGACAATATGGTAAA
DvMF_3151 glnQ -340 4.6 TTTACGTTTTTGTTAA
DvMF_2665 DVU0671 -369 3.7 TTCGCGAAATTGTAAA
DvMF_2099 glnA -203 4.9 TTTACAATGATGTCAA
DvMF_0611 null -92 4.8 TTGACATTTCTGTAAT
DvMF_3023 amtB2 -238 4.4 TATACAAAAATGTTAT
DvMF_2528 nifA-2 -138 4.4 TTTCGATAATTGTAAA
DvMF_3023 amtB2 -419 4.8 TTTTCAAAAATGTAAT
DvMF_3023 amtB2 -270 4.1 AATGCAAATATGTAAA
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