Profile of regulator NifA-1 in Desulfovibrionales
Properties
| Regulator family: |
Fis |
| Regulation mode: |
|
| Biological process: |
Nitrogen assimilation |
| Effector: |
|
| Regulog: |
NifA-1 - Desulfovibrionales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Desulfohalobium retbaense DSM 5692
|
|
Dret_0402 |
DVU0671 |
-87 |
4.6 |
TTTACATTTTCGTAAC |
|
Dret_2267 |
amtB |
-132 |
4.2 |
ATGCCATTTTTGACAA |
|
Dret_2267 |
amtB |
-173 |
3.9 |
GTAACAAATTTGTCCA |
|
Dret_0113 |
amtB2 |
-151 |
5 |
TTTTCAATTTTGTCAA |
|
Dret_0113 |
amtB2 |
-270 |
4.5 |
ATTCCATTTTTGTAAC |
|
Dret_0113 |
amtB2 |
-393 |
3.9 |
GTTTCAGAAATGGAAG |
|
Dret_2389 |
glnA |
-141 |
5 |
TTGACAAAAATGAAAA |
|
Dret_2389 |
glnA |
-182 |
4.5 |
TTTTCGTTTTTGTCAA |
|
Dret_2389 |
glnA |
-173 |
3.9 |
TTGTCAATATTGGATC |
|
Desulfomicrobium baculatum DSM 4028
|
|
Dbac_3049 |
amtB2 |
-176 |
4.7 |
TATACATAAATGTTAA |
|
Dbac_1372 |
null |
-75 |
4.3 |
ATGACATTTCTGTCAT |
|
Dbac_1496 |
glnN |
-208 |
4.6 |
TTTGCAAATTTGTAAT |
|
Dbac_3048 |
amtB |
-387 |
4.5 |
TTTTCAATTTTGGAAG |
|
Dbac_1496 |
glnN |
-328 |
4 |
TTGACATTTATGTGCA |
|
Dbac_1504 |
null |
-38 |
5.1 |
TTTACAATAATGGCAA |
|
Dbac_2819 |
glnA |
-89 |
4.6 |
TTTCCAATTTTGCAAA |
|
Dbac_3049 |
amtB2 |
-284 |
4.5 |
CTTCCAAAATTGAAAA |
|
Dbac_3049 |
amtB2 |
-64 |
3.7 |
TTAACAACTTTGGCAC |
|
Dbac_1496 |
glnN |
-155 |
4.5 |
ATTTCAAAAATGTAAT |
|
Dbac_1372 |
null |
-117 |
4.4 |
TCTACATTTTTGTCAT |
|
Desulfovibrio desulfuricans G20
|
|
Dde_1814 |
gltB-1 |
-46 |
4.2 |
TAAACATTTTTGTCAC |
|
Dde_1814 |
gltB-1 |
-254 |
4.9 |
ATTACAAAATTGTAAT |
|
Dde_1814 |
gltB-1 |
-208 |
3.7 |
TTCTCAAAAATATAAA |
|
Dde_1218 |
DVU0671 |
-198 |
3.7 |
ATTGCATTTTTCTCAA |
|
Dde_0102 |
glnN |
-174 |
4.7 |
TAAACATTTATGTAAA |
|
Dde_0102 |
glnN |
-216 |
4.1 |
TTAACAAAAAAGTTAA |
|
Dde_1428 |
glnQ |
-253 |
5.1 |
TTTACAATTATGTAAC |
|
Dde_1428 |
glnQ |
-59 |
3.7 |
TTGACAATTTTGAGCA |
|
Dde_1428 |
glnQ |
23 |
3.5 |
TATTCATAAATGGTAC |
|
Dde_2763 |
null |
-139 |
4.5 |
ATAACAAATTTGTAAT |
|
Dde_1634 |
null |
-99 |
4.9 |
TTGACATTTCTGTAAG |
|
Dde_1218 |
DVU0671 |
-353 |
4.7 |
TTGACGTTTATGTCAA |
|
Dde_3492 |
amtB2 |
-192 |
4.9 |
TTTACTTTTTTGTAAA |
|
Dde_3492 |
amtB2 |
-160 |
5.2 |
TTGACATATATGTCAA |
|
Dde_0104 |
glnA |
-140 |
4 |
TTTGCAAAAATGTGAT |
|
Dde_2311 |
amtB |
-207 |
3.7 |
TTAACAAAATTGTGTT |
|
Dde_2311 |
amtB |
-175 |
4.3 |
ATAACAAATATGTATA |
|
Desulfovibrio magneticus RS-1
|
|
DMR_10730 |
glnN |
-236 |
4.4 |
TTTACATTATTGCTAG |
|
DMR_10730 |
glnN |
-335 |
3.7 |
TTGACACAATTGTTTC |
|
DMR_34890 |
amtB |
-158 |
4.4 |
GTTGCAAAAATGTCAA |
|
Desulfovibrio salexigens DSM 2638
|
|
Desal_3587 |
DVU0671 |
-194 |
3.8 |
TTACAAATATTGTTAA |
|
Desal_2290 |
glnN |
-276 |
4.7 |
TATACAATTTTGTAAC |
|
Desal_3587 |
DVU0671 |
-92 |
4.8 |
TTTACAATATTGATAA |
|
Desal_3587 |
DVU0671 |
-35 |
4.3 |
CTAACAGTATTGAAAA |
|
Desal_1519 |
glnQ |
-358 |
3.9 |
TTGTCTTTTTTGTATA |
|
Desal_1519 |
glnQ |
-197 |
4.5 |
TGTACATAAATGGAAA |
|
Desal_3370 |
null |
-153 |
3.6 |
TTAACAAAAATGATTT |
|
Desal_1531 |
nifA-1 |
-140 |
4.4 |
CTGTCAATTTTGAAAA |
|
Desal_3280 |
null |
-339 |
3.9 |
TTGCCAAAATTGTTTT |
|
Desal_2290 |
glnN |
-225 |
4.8 |
ATTACATTTTTGTAAC |
|
Desal_2290 |
glnN |
-182 |
4.6 |
TCTACATTTTTGTAAG |
|
Desal_1534 |
null |
-231 |
3.9 |
ATTGCAAAAAAGTCAA |
|
Desal_1534 |
null |
-76 |
4.5 |
TTGACCTTTTTGTCAG |
|
Desal_3066 |
amtB2 |
-134 |
4.4 |
AATACATTTTTGTAAT |
|
Desal_3066 |
amtB2 |
-289 |
4.4 |
CTGAAAAAATTGTCAA |
|
Desal_3066 |
amtB2 |
-185 |
4.7 |
TTTACCTTTTTGTAAT |
|
Desal_3438 |
amtB |
-50 |
4 |
GAGACGAAATTGTAAA |
|
Desal_3438 |
amtB |
-91 |
3.7 |
TGTCTAAAATTGTAAA |
|
Desal_3438 |
amtB |
-204 |
4 |
TTTCCAATTATGTTTT |
|
Desal_3438 |
amtB |
-153 |
4 |
TTTTCAGTTTTGGCAC |
|
Desal_3370 |
null |
-9 |
3.6 |
TGTACAAAAGTGATAA |
|
Desal_0518 |
nifA-2 |
-138 |
4.2 |
TTTCCATTAATGTTCA |
|
Desal_0518 |
nifA-2 |
-108 |
4.8 |
TTTACATAAATGTGAA |
|
Desulfovibrio vulgaris Hildenborough
|
|
DVU1823 |
gltB-1 |
-240 |
4.1 |
GTCTCAAAATTGTAAA |
|
DVU0671 |
DVU0671 |
-355 |
4.8 |
GTTACATTTTTGTAAT |
|
DVU0753 |
null |
-246 |
4.1 |
TTGACGTTTTTGAAAT |
|
DVU0753 |
null |
-106 |
4.8 |
ATGACAGTTTTGTAAA |
|
DVU1231 |
amtB |
-159 |
3.9 |
ACGACAAAAATGCAAA |
|
DVU3290 |
null |
-230 |
4.2 |
TAGACAAAAATGTTAC |
|
DVU3290 |
null |
-178 |
4 |
TTGCCATTTTTGATAT |
|
DVU1258 |
glnN |
-275 |
4.7 |
TATACATTTTTGGAAA |
|
DVU2343 |
glnQ |
-248 |
4.1 |
ATTACTTTTTTGTCAC |
|
DVU2343 |
glnQ |
-403 |
3.7 |
TTGTCTTGTTTGTAAA |
|
DVU1258 |
glnN |
-178 |
4.3 |
TTTACTATTTTGAAAG |
|
DVU1258 |
glnN |
-230 |
4.6 |
ATTACAATAGTGTCAA |
|
DVU1258 |
glnN |
-411 |
4.3 |
TTTACATATTTGATAC |
|
DVU3392 |
glnA |
-176 |
3.9 |
TGAACAACATTGTCAA |
|
DVU3392 |
glnA |
-135 |
4.8 |
CTTCCAATAATGTAAG |
|
DVU1952 |
null |
-92 |
4.9 |
TTGACATTTCTGTAAG |
|
Desulfovibrio vulgaris str. Miyazaki F
|
|
DvMF_2387 |
null |
-101 |
3.8 |
TTGCCGTTTTTGGAAT |
|
DvMF_2387 |
null |
-176 |
4.1 |
GTGGCAAAAATGTAAT |
|
DvMF_2387 |
null |
-153 |
4.2 |
AGTACAAATATGTAAT |
|
DvMF_2528 |
nifA-2 |
-170 |
3.6 |
TATTCAAAAATGGTAT |
|
DvMF_0546 |
gltB-1 |
-403 |
3.5 |
AGAACAAAAATGTTAT |
|
DvMF_0866 |
amtB |
-175 |
3.9 |
TTACCAAAATGGAAAA |
|
DvMF_0866 |
amtB |
-208 |
4.1 |
TTTACAAAAAAGAAAC |
|
DvMF_1590 |
glnN |
-332 |
3.9 |
GTTACAAGTTTGCAAA |
|
DvMF_2788 |
null |
-177 |
4.2 |
GAAACATTAATGTCAA |
|
DvMF_2788 |
null |
-305 |
4.1 |
CTGACAATTTCGCAAA |
|
DvMF_1590 |
glnN |
-54 |
4 |
GAAACAAATTTGTAAG |
|
DvMF_1590 |
glnN |
-288 |
3.9 |
TGAACGAATTTGTAAA |
|
DvMF_0866 |
amtB |
-176 |
4.3 |
GTTACCAAAATGGAAA |
|
DvMF_3151 |
glnQ |
-67 |
4.7 |
CTGACAATATGGTAAA |
|
DvMF_3151 |
glnQ |
-340 |
4.6 |
TTTACGTTTTTGTTAA |
|
DvMF_2665 |
DVU0671 |
-369 |
3.7 |
TTCGCGAAATTGTAAA |
|
DvMF_2099 |
glnA |
-203 |
4.9 |
TTTACAATGATGTCAA |
|
DvMF_0611 |
null |
-92 |
4.8 |
TTGACATTTCTGTAAT |
|
DvMF_3023 |
amtB2 |
-238 |
4.4 |
TATACAAAAATGTTAT |
|
DvMF_2528 |
nifA-2 |
-138 |
4.4 |
TTTCGATAATTGTAAA |
|
DvMF_3023 |
amtB2 |
-419 |
4.8 |
TTTTCAAAAATGTAAT |
|
DvMF_3023 |
amtB2 |
-270 |
4.1 |
AATGCAAATATGTAAA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
DOWNLOAD
|
