Regulon of Cobalamin in Desulfovibrio salexigens DSM 2638

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Desulfovibrionales
Under regulation:
- Genes	10
- Operons	4

Member of regulog collections

By taxonomy - Desulfovibrionales
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -393 Score: 38.6 Sequence: TCGTTGTGTTTTCAC... Locus tag: Desal_0826 Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
	Desal_0826	nrdA	Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Position: -265 Score: 58.6 Sequence: TATATTGAATTTGAT... Locus tag: Desal_0813 Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Locus tag: Desal_0814 Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
	Desal_0813	metE	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
	Desal_0814	metF	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Position: -306 Score: 76.2 Sequence: ATATTTAGCCTTTGC... Locus tag: Desal_2307 Name: cbiK Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3) Locus tag: Desal_2306 Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC Locus tag: Desal_2305 Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD Locus tag: Desal_2304 Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF Locus tag: Desal_2303 Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
	Desal_2307	cbiK	Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
	Desal_2306	btuC	Vitamin B12 ABC transporter, permease component BtuC
	Desal_2305	btuD	Vitamin B12 ABC transporter, ATPase component BtuD
	Desal_2304	btuF	Vitamin B12 ABC transporter, B12-binding component BtuF
	Desal_2303	cbiL	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Position: -420 Score: 40.7 Sequence: ACTTCAGGAATCCGT... Locus tag: Desal_3514 Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Locus tag: Desal_3513 Name: null Funciton: Hypothetical protein
	Desal_3514	nrdD	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
	Desal_3513		Hypothetical protein

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD