Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Cobalamin in Desulfovibrio salexigens DSM 2638

Properties
Regulator type: RNA regulatory element
Name: Cobalamin
RFAM: RF00174
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector: Adenosylcobalamin
Regulog: Cobalamin - Desulfovibrionales
Under regulation:
- Genes 10
- Operons 4
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -393
Score: 38.6
Sequence: TCGTTGTGTTTTCAC...
Locus tag: Desal_0826
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
nrdA
Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)

Position: -265
Score: 58.6
Sequence: TATATTGAATTTGAT...
Locus tag: Desal_0813
Name: metE
Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
Locus tag: Desal_0814
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
metE
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
metF
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)

Position: -306
Score: 76.2
Sequence: ATATTTAGCCTTTGC...
Locus tag: Desal_2307
Name: cbiK
Funciton: Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
Locus tag: Desal_2306
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Desal_2305
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Desal_2304
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Desal_2303
Name: cbiL
Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
cbiK
Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3)
btuC
Vitamin B12 ABC transporter, permease component BtuC
btuD
Vitamin B12 ABC transporter, ATPase component BtuD
btuF
Vitamin B12 ABC transporter, B12-binding component BtuF
cbiL
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)

Position: -420
Score: 40.7
Sequence: ACTTCAGGAATCCGT...
Locus tag: Desal_3514
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Desal_3513
Name: null
Funciton: Hypothetical protein
nrdD
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Hypothetical protein
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