Regulons of Rhodococcus opacus B4

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	AcnR	Citrate	Tricarboxylic acid cycle	2	2
TF	AmtR	GlnK-AMP, signal transduction protein	Nitrogen metabolism	3	2
TF	AnsR		Aspartate utilization; Asparagine degradation	2	4
TF	ArgR	Arginine	Arginine biosynthesis	1	1
TF	ArsR	Arsenite; Arsenate	Arsenic resistance	2	2
TF	BioQ	Biotin	Biotin biosynthesis	6	8
TF	BioQ	Biotin	Biotin biosynthesis	6	8
TF	CsoR	Copper ion, (Cu+)	Copper resistance	3	2
TF	DasR	Glucosamine-6-phosphate	N-acetylglucosamine utilization	2	2
TF	HrcA	Heat shock	Heat shock response	3	4
TF	HutC	cis-Urocanic acid	Histidine utilization	4	2
TF	IolR		Inositol utilization	8	8
TF	LexA	DNA damage	SOS response	8	9
TF	LldR	L-lactate	Lactate utilization	2	4
TF	LtbR		Leucine biosynthesis	3	2
TF	Mce2R		Fatty acid metabolism	1	1
TF	MntR	Manganese ion, (Mn2+)	Manganese homeostasis	3	3
TF	Nfa20840			5	7
TF	Nfa21130		Metabolite transport	1	1
TF	Nfa3720		Multidrug resistance; Multidrug efflux	1	1
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	2
TF	NrtR	Adenosine diphosphate ribose	NAD biosynthesis	1	2
TF	PaaR	Phenylacetyl-CoA	Phenylacetic acid degradation	6	8
TF	PaaR	Phenylacetyl-CoA	Phenylacetic acid degradation	4	7
TF	PdxR2	Pyridoxal-5-phosphate	Pyridoxine/pyridoxal homeostasis	1	1
TF	PdxR3		Pyridoxine/pyridoxal homeostasis	4	6
TF	PhnF		Phosphonate utilization; 2-aminoethylphosphonate utilization	4	4
TF	QorR		Energy metabolism	2	2
TF	RER_29210		Multidrug efflux	1	1
TF	ROP_32700			2	4
TF	Rex	NADH	Energy metabolism	12	9
TF	Rex	NADH	Energy metabolism	8	8
TF	TauR	Taurine	Taurine utilization	5	5
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	6	8

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --