Regulon of BioQ in Rhodococcus opacus B4

Properties
Regulator type:	Transcription factor
TF locus tag:	ROP_07710
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Biotin biosynthesis
Effector:	Biotin
Regulog:	BioQ - Nocardiaceae
Statistics of regulated genes:
- Genes	14
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 25 sites [see more]

Member of regulog collections

By trascription factor - BioQ
By taxonomy - Nocardiaceae
By TF family - TetR
By effector - Biotin
By pathway - Biotin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -99 Score: 5.5 Sequence: ATTGAACACCGTACAAG Position: -83 Score: 5.8 Sequence: GTTGAACGGTGTTCACG Locus tag: ROP_07710 Name: bioQ Funciton: Biotin repressor, TetR family
	ROP_07710	bioQ	Biotin repressor, TetR family
Position: -41 Score: 6.1 Sequence: CTTGAACGGTGTTCAAC Locus tag: ROP_07830 Name: bioA Funciton: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
	ROP_07830	bioA	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
Position: -38 Score: 5.7 Sequence: CTTGAACGTCGTTCAAG Locus tag: ROP_53000 Name: bioY Funciton: Substrate-specific component BioY of biotin ECF transporter Locus tag: ROP_53010 Name: yhfT Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Locus tag: ROP_53020 Name: yhfS Funciton: acetyl-CoA acetyltransferase Locus tag: ROP_53030 Name: bioM Funciton: ATPase component BioM of energizing module of biotin ECF transporter Locus tag: ROP_53040 Name: bioN Funciton: Transmembrane component BioN of energizing module of biotin ECF transporter Locus tag: ROP_53050 Name: yhfT Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	ROP_53000	bioY	Substrate-specific component BioY of biotin ECF transporter
	ROP_53010	yhfT	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	ROP_53020	yhfS	acetyl-CoA acetyltransferase
	ROP_53030	bioM	ATPase component BioM of energizing module of biotin ECF transporter
	ROP_53040	bioN	Transmembrane component BioN of energizing module of biotin ECF transporter
	ROP_53050	yhfT	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -38 Score: 5.7 Sequence: CTTGAACGTCGTTCAAG Locus tag: ROP_52960 Name: bioY Funciton: Substrate-specific component BioY of biotin ECF transporter Locus tag: ROP_52970 Name: yhfT Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) Locus tag: ROP_52980 Name: yhfS Funciton: acetyl-CoA acetyltransferase
	ROP_52960	bioY	Substrate-specific component BioY of biotin ECF transporter
	ROP_52970	yhfT	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	ROP_52980	yhfS	acetyl-CoA acetyltransferase
Position: -88 Score: 5.9 Sequence: CGTGAACACCGTTCAAC Position: -72 Score: 5.1 Sequence: CTTGTACGGTGTTCAAT Locus tag: ROP_07700 Name: bioB Funciton: Biotin synthase (EC 2.8.1.6)
	ROP_07700	bioB	Biotin synthase (EC 2.8.1.6)
Position: -24 Score: 6.1 Sequence: GTTGAACACCGTTCAAG Locus tag: ROP_07820 Name: bioF Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47) Locus tag: ROP_07810 Name: bioD Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
	ROP_07820	bioF	8-amino-7-oxononanoate synthase (EC 2.3.1.47)
	ROP_07810	bioD	Dethiobiotin synthetase (EC 6.3.3.3)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of BioQ in Rhodococcus opacus B4

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --