Regulon of BioQ in Rhodococcus opacus B4
| Regulator type: | Transcription factor |
| TF locus tag: | ROP_07710 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Biotin biosynthesis |
| Effector: | Biotin |
| Regulog: | BioQ - Actinomycetales |
| Statistics of regulated genes: | |
| - Genes | 14 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - BioQ
- By TF family - TetR
- By effector - Biotin
- By pathway - Biotin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -38
Score: 5.4 Sequence: CTTGAACGTCGTTCAAG
Locus tag: ROP_52960
Name: bioY Funciton: Substrate-specific component BioY of biotin ECF transporter
Locus tag: ROP_52970
Name: null Funciton: hypothetical protein
Locus tag: ROP_52980
Name: null Funciton: probable beta-ketoadipyl-CoA thiolase |
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bioY
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Substrate-specific component BioY of biotin ECF transporter
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hypothetical protein
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probable beta-ketoadipyl-CoA thiolase
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Position: -38
Score: 5.4 Sequence: CTTGAACGTCGTTCAAG
Locus tag: ROP_53000
Name: bioY Funciton: Substrate-specific component BioY of biotin ECF transporter
Locus tag: ROP_53010
Name: null Funciton: hypothetical protein
Locus tag: ROP_53020
Name: null Funciton: acetyl-CoA acetyltransferase
Locus tag: ROP_53030
Name: bioM Funciton: ATPase component BioM of energizing module of biotin ECF transporter
Locus tag: ROP_53040
Name: bioN Funciton: Transmembrane component BioN of energizing module of biotin ECF transporter
Locus tag: ROP_53050
Name: null Funciton: putative acid--CoA ligase |
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bioY
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Substrate-specific component BioY of biotin ECF transporter
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hypothetical protein
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acetyl-CoA acetyltransferase
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bioM
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ATPase component BioM of energizing module of biotin ECF transporter
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bioN
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Transmembrane component BioN of energizing module of biotin ECF transporter
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putative acid--CoA ligase
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Position: -24
Score: 5.7 Sequence: GTTGAACACCGTTCAAG
Locus tag: ROP_07820
Name: bioF Funciton: 8-amino-7-oxononanoate synthase
Locus tag: ROP_07810
Name: bioD Funciton: dethiobiotin synthetase |
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bioF
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8-amino-7-oxononanoate synthase
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bioD
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dethiobiotin synthetase
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Position: -41
Score: 5.7 Sequence: CTTGAACGGTGTTCAAC
Locus tag: ROP_07830
Name: bioA Funciton: adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
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bioA
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adenosylmethionine-8-amino-7-oxononanoate aminotransferase
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Position: -99
Score: 5.4 Sequence: ATTGAACACCGTACAAG
Position: -83
Score: 5.3 Sequence: GTTGAACGGTGTTCACG
Locus tag: ROP_07710
Name: bioQ Funciton: biotin repressor, TetR family |
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bioQ
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biotin repressor, TetR family
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Position: -88
Score: 5.3 Sequence: CGTGAACACCGTTCAAC
Position: -72
Score: 5.4 Sequence: CTTGTACGGTGTTCAAT
Locus tag: ROP_07700
Name: bioB Funciton: biotin synthase |
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bioB
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biotin synthase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |