Regulon of IolR in Rhodococcus opacus B4
| Regulator type: | Transcription factor |
| TF locus tag: | ROP_10650 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Inositol utilization |
| Effector: | |
| Regulog: | IolR - Nocardiaceae |
| Statistics of regulated genes: | |
| - Genes | 17 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Nocardiaceae
- By TF family - GntR/Others
- By pathway - Inositol utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -37
Score: 4.9 Sequence: GCTTTGTCCGGACATAAA
Locus tag: ROP_37590
Name: iolT Funciton: Myo-inositol transporter, MFS family
Locus tag: ROP_37580
Name: usp Funciton: universal stress protein |
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iolT
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Myo-inositol transporter, MFS family
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usp
|
universal stress protein
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Position: -26
Score: 4.3 Sequence: CGAATGTCTTAACATATA
Locus tag: ROP_03440
Name: oxiA Funciton: putative myo-inositol 2-dehydrogenase |
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oxiA
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putative myo-inositol 2-dehydrogenase
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Position: -89
Score: 5 Sequence: ACTTTGTCCGCACAAACG
Locus tag: ROP_36840
Name: iolG3 Funciton: Myo-inositol 2-dehydrogenase (EC 1.1.1.18) |
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iolG3
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Myo-inositol 2-dehydrogenase (EC 1.1.1.18)
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Position: -123
Score: 3.3 Sequence: CTCCTGTCAAGACTTTGT
Position: -112
Score: 5.2 Sequence: ACTTTGTCCTGACATTAT
Locus tag: ROP_10650
Name: iolR Funciton: Inositol utilization transcriptional regulator, GntR family
Locus tag: ROP_10640
Name: iolP Funciton: major facilitator family sugar permease |
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iolR
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Inositol utilization transcriptional regulator, GntR family
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iolP
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major facilitator family sugar permease
|
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Position: -104
Score: 5.1 Sequence: CTAATGTCCAGACAAACT
Locus tag: ROP_10630
Name: iolTA Funciton: Inositol ABC transport system sugar-binding protein
Locus tag: ROP_10620
Name: iolTB Funciton: Inositol ABC transport system permease protein
Locus tag: ROP_10610
Name: iolTC Funciton: Inositol ABC transport system ATP-binding protein |
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iolTA
|
Inositol ABC transport system sugar-binding protein
|
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iolTB
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Inositol ABC transport system permease protein
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iolTC
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Inositol ABC transport system ATP-binding protein
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Position: -109
Score: 5.2 Sequence: ATAATGTCAGGACAAAGT
Position: -98
Score: 3.3 Sequence: ACAAAGTCTTGACAGGAG
Locus tag: ROP_10660
Name: iolC Funciton: 5-keto-2-deoxygluconokinase (EC 2.7.1.92)
Locus tag: ROP_10670
Name: iolJ Funciton: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
Locus tag: ROP_10680
Name: iolB Funciton: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)
Locus tag: ROP_10690
Name: iolD Funciton: Epi-inositol hydrolase (EC 3.7.1.-)
Locus tag: ROP_10700
Name: iolE Funciton: Inosose dehydratase (EC 4.2.1.44)
Locus tag: ROP_10710
Name: iolG Funciton: Myo-inositol 2-dehydrogenase (EC 1.1.1.18)
Locus tag: ROP_10720
Name: iolH Funciton: putative sugar-phosphate epimerase/isomerase IolH
Locus tag: ROP_10730
Name: iolA Funciton: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) |
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iolC
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5-keto-2-deoxygluconokinase (EC 2.7.1.92)
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iolJ
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5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
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iolB
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5-deoxy-glucuronate isomerase (EC 5.3.1.-)
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iolD
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Epi-inositol hydrolase (EC 3.7.1.-)
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iolE
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Inosose dehydratase (EC 4.2.1.44)
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iolG
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Myo-inositol 2-dehydrogenase (EC 1.1.1.18)
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iolH
|
putative sugar-phosphate epimerase/isomerase IolH
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iolA
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Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |