Regulon of Zur in Rhodococcus opacus B4

Properties
Regulator type:	Transcription factor
TF locus tag:	ROP_09430
Regulator family:	FUR
Regulation mode:	repressor
Biological process:	Zinc homeostasis
Effector:	Zinc ion, (Zn2+)
Regulog:	Zur - Nocardiaceae
Statistics of regulated genes:
- Genes	16
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 31 sites [see more]

Member of regulog collections

By taxonomy - Nocardiaceae
By trascription factor - Zur
By TF family - FUR
By effector - Zinc ion, (Zn2+)
By pathway - Zinc homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -116 Score: 5.7 Sequence: TTTCGATAACGATTGTCATTA Position: -62 Score: 5.8 Sequence: TGTCGAAAATGATTGTCATCA Locus tag: ROP_56810 Name: rpmB2 Funciton: LSU ribosomal protein L28p Locus tag: ROP_56800 Name: rpmG2 Funciton: LSU ribosomal protein L33p Locus tag: ROP_56790 Name: rpsN2 Funciton: SSU ribosomal protein S14p (S29e) Locus tag: ROP_56780 Name: rpsR2 Funciton: SSU ribosomal protein S18p
	ROP_56810	rpmB2	LSU ribosomal protein L28p
	ROP_56800	rpmG2	LSU ribosomal protein L33p
	ROP_56790	rpsN2	SSU ribosomal protein S14p (S29e)
	ROP_56780	rpsR2	SSU ribosomal protein S18p
Position: -8 Score: 5.7 Sequence: TAACGATAATGATTGTCGTAA Locus tag: ROP_22690 Name: znuC2 Funciton: Zinc ABC transporter, ATP-binding protein ZnuC
	ROP_22690	znuC2	Zinc ABC transporter, ATP-binding protein ZnuC
Position: -30 Score: 5.8 Sequence: TAACGACAATCGTTTTCAATA Locus tag: ROP_04730 Name: rpmJ2 Funciton: LSU ribosomal protein L36 Locus tag: ROP_04720 Name: rpmF2 Funciton: LSU ribosomal protein L32p
	ROP_04730	rpmJ2	LSU ribosomal protein L36
	ROP_04720	rpmF2	LSU ribosomal protein L32p
Position: -28 Score: 5 Sequence: CAACGGTAACGGTTTCCAATA Locus tag: ROP_44070 Name: znuA Funciton: Zinc ABC transporter, periplasmic-binding protein ZnuA Locus tag: ROP_44060 Name: znuC Funciton: Zinc ABC transporter, ATP-binding protein ZnuC Locus tag: ROP_44050 Name: znuB Funciton: Zinc ABC transporter, inner membrane permease protein ZnuB
	ROP_44070	znuA	Zinc ABC transporter, periplasmic-binding protein ZnuA
	ROP_44060	znuC	Zinc ABC transporter, ATP-binding protein ZnuC
	ROP_44050	znuB	Zinc ABC transporter, inner membrane permease protein ZnuB
Position: -47 Score: 4.6 Sequence: CTTTGACAACCGTTTGCAAAA Position: -31 Score: 5.7 Sequence: TTACGACAATCATTATCGTTA Locus tag: ROP_22700 Name: znuB2 Funciton: Zinc ABC transporter, inner membrane permease protein ZnuB Locus tag: ROP_22710 Name: ROP_22710 Funciton: WD40/YVTN repeat-like-containing domain Locus tag: ROP_22720 Name: znuA2 Funciton: Zinc ABC transporter, periplasmic-binding protein ZnuA Locus tag: ROP_22730 Name: nfa23280 Funciton: WD40/YVTN repeat-like-containing domain
	ROP_22700	znuB2	Zinc ABC transporter, inner membrane permease protein ZnuB
	ROP_22710	ROP_22710	WD40/YVTN repeat-like-containing domain
	ROP_22720	znuA2	Zinc ABC transporter, periplasmic-binding protein ZnuA
	ROP_22730	nfa23280	WD40/YVTN repeat-like-containing domain
Position: -56 Score: 5.8 Sequence: TGATGACAATCATTTTCGACA Locus tag: ROP_56820 Name: yciC Funciton: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family Locus tag: ROP_56830 Name: rpmE2 Funciton: LSU ribosomal protein L31p
	ROP_56820	yciC	Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
	ROP_56830	rpmE2	LSU ribosomal protein L31p

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Zur in Rhodococcus opacus B4

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --