Regulon of AmtR in Rhodococcus opacus B4
| Regulator type: | Transcription factor |
| TF locus tag: | ROP_68870 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Nitrogen metabolism |
| Effector: | GlnK-AMP, signal transduction protein |
| Regulog: | AmtR - Nocardiaceae |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Nocardiaceae
- By trascription factor - AmtR
- By TF family - TetR
- By effector - GlnK-AMP, signal transduction protein
- By pathway - Nitrogen metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -171
Score: 7.2 Sequence: AATATCTGTCGATCGATAGTTTTC
Locus tag: ROP_68870
Name: amtR Funciton: Transcriptional regulator of urea utilization, TetR family |
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amtR
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Transcriptional regulator of urea utilization, TetR family
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Position: -47
Score: 6.9 Sequence: GAAAACTATCGATCGACAGATATT
Locus tag: ROP_68880
Name: uctT Funciton: Urea carboxylase-related transporter, Amino acid permease family
Locus tag: ROP_68890
Name: amt1 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: ROP_68900
Name: amt2 Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: ROP_68910
Name: ucaA Funciton: Urea carboxylase (EC 6.3.4.6) |
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uctT
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Urea carboxylase-related transporter, Amino acid permease family
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amt1
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Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
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amt2
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Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
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ucaA
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Urea carboxylase (EC 6.3.4.6)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |