Regulon of PhnF in Rhodococcus opacus B4
| Regulator type: | Transcription factor |
| TF locus tag: | ROP_66370 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Phosphonate utilization; 2-aminoethylphosphonate utilization |
| Effector: | |
| Regulog: | PhnF - Nocardiaceae |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 2 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Nocardiaceae
- By TF family - GntR/Others
- By pathway - Phosphonate utilization
- By pathway - 2-aminoethylphosphonate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -107
Score: 6 Sequence: AATGGTCTATACCAAT
Position: -60
Score: 5.7 Sequence: ACTGGTCTAGACCAAA
Locus tag: ROP_66360
Name: phnS Funciton: Probable 2-aminoethylphosphonate ABC transporter, periplasmic protein
Locus tag: ROP_66350
Name: phnT Funciton: Probable 2-aminoethylphosphonate ABC transporter, ATP-binding proteinin
Locus tag: ROP_66340
Name: phnU Funciton: Probable 2-aminoethylphosphonate ABC transporter, permease protein 1
Locus tag: ROP_66330
Name: phnV Funciton: Probable 2-aminoethylphosphonate ABC transporter, permease protein 2 |
|||
|
phnS
|
Probable 2-aminoethylphosphonate ABC transporter, periplasmic protein
|
||
|
phnT
|
Probable 2-aminoethylphosphonate ABC transporter, ATP-binding proteinin
|
||
|
phnU
|
Probable 2-aminoethylphosphonate ABC transporter, permease protein 1
|
||
|
phnV
|
Probable 2-aminoethylphosphonate ABC transporter, permease protein 2
|
||
|
Position: -139
Score: 5.7 Sequence: TTTGGTCTAGACCAGT
Position: -92
Score: 6 Sequence: ATTGGTATAGACCATT
Locus tag: ROP_66370
Name: phnF Funciton: Transcriptional regulator for phosphonate utilization, GntR family |
|||
|
phnF
|
Transcriptional regulator for phosphonate utilization, GntR family
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |