Statistics of regulated genes

Genome	Genes	Operons
Nocardia farcinica IFM 10152	7	3
Rhodococcus erythropolis PR4	7	2
Rhodococcus opacus B4	5	2
Rhodococcus sp. RHA1	5	2

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes					Function
CRON 1.
COG0665	* Nocardia farcinica IFM 10152 Site: position = -78 score = 5.99198 sequence = ACTGGTCTATACCAAT Site: position = -31 score = 5.37986 sequence = ATAGGTCTAGACCATT Gene: nfa35260: Putative FAD dependent oxidoreductase	* Rhodococcus erythropolis PR4 Site: position = -78 score = 5.38123 sequence = TTCGGTCTATACCAAT Site: position = -31 score = 6.05071 sequence = ATTGGTCTAGACCAAA Gene: RER_25640: Putative FAD dependent oxidoreductase	Rhodococcus opacus B4 Gene: ROP_34060: Putative FAD dependent oxidoreductase	Rhodococcus sp. RHA1 Gene: RHA1_ro03606: Putative FAD dependent oxidoreductase	Putative FAD dependent oxidoreductase
phnX	* Nocardia farcinica IFM 10152 Site: position = -98 score = 5.7619 sequence = GATGGTCTATACCAAT Site: position = -145 score = 5.69192 sequence = TTTGGTCTATACCAAG Gene: nfa35310: Phosphonoacetaldehyde hydrolase (EC 3.11.1.1)	Rhodococcus erythropolis PR4 Gene: RER_25630: Phosphonoacetaldehyde hydrolase (EC 3.11.1.1)	2 Rhodococcus opacus B4 Gene: ROP_33550: Phosphonoacetaldehyde hydrolase (EC 3.11.1.1) Gene: ROP_34050: Phosphonoacetaldehyde hydrolase (EC 3.11.1.1)	2 Rhodococcus sp. RHA1 Gene: RHA1_ro03586: Phosphonoacetaldehyde hydrolase (EC 3.11.1.1) Gene: RHA1_ro03605: Phosphonoacetaldehyde hydrolase (EC 3.11.1.1)	Phosphonoacetaldehyde hydrolase (EC 3.11.1.1)
phnS	Nocardia farcinica IFM 10152	Rhodococcus erythropolis PR4 Gene: RER_25620: Probable 2-aminoethylphosphonate ABC transporter, periplasmic protein	* Rhodococcus opacus B4 Site: position = -107 score = 5.99198 sequence = AATGGTCTATACCAAT Site: position = -60 score = 5.69055 sequence = ACTGGTCTAGACCAAA Gene: ROP_66360: Probable 2-aminoethylphosphonate ABC transporter, periplasmic protein	* Rhodococcus sp. RHA1 Site: position = -108 score = 5.99198 sequence = AATGGTCTATACCAAT Site: position = -61 score = 5.69055 sequence = ACTGGTCTAGACCAAA Gene: RHA1_ro06602: Probable 2-aminoethylphosphonate ABC transporter, periplasmic protein	Probable 2-aminoethylphosphonate ABC transporter, periplasmic protein
phnT	Nocardia farcinica IFM 10152	Rhodococcus erythropolis PR4 Gene: RER_25610: Probable 2-aminoethylphosphonate ABC transporter, ATP-binding proteinin	Rhodococcus opacus B4 Gene: ROP_66350: Probable 2-aminoethylphosphonate ABC transporter, ATP-binding proteinin	Rhodococcus sp. RHA1 Gene: RHA1_ro06601: Probable 2-aminoethylphosphonate ABC transporter, ATP-binding proteinin	Probable 2-aminoethylphosphonate ABC transporter, ATP-binding proteinin
phnU	Nocardia farcinica IFM 10152	Rhodococcus erythropolis PR4 Gene: RER_25600: Probable 2-aminoethylphosphonate ABC transporter, permease protein 1	Rhodococcus opacus B4 Gene: ROP_66340: Probable 2-aminoethylphosphonate ABC transporter, permease protein 1	Rhodococcus sp. RHA1 Gene: RHA1_ro06600: Probable 2-aminoethylphosphonate ABC transporter, permease protein 1	Probable 2-aminoethylphosphonate ABC transporter, permease protein 1
phnV	Nocardia farcinica IFM 10152	Rhodococcus erythropolis PR4 Gene: RER_25590: Probable 2-aminoethylphosphonate ABC transporter, permease protein 2	Rhodococcus opacus B4 Gene: ROP_66330: Probable 2-aminoethylphosphonate ABC transporter, permease protein 2	Rhodococcus sp. RHA1 Gene: RHA1_ro06599: Probable 2-aminoethylphosphonate ABC transporter, permease protein 2	Probable 2-aminoethylphosphonate ABC transporter, permease protein 2
phnD	Nocardia farcinica IFM 10152 Gene: nfa35300: Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)	Rhodococcus erythropolis PR4	Rhodococcus opacus B4	Rhodococcus sp. RHA1	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)
phnC	Nocardia farcinica IFM 10152 Gene: nfa35290: Phosphonate ABC transporter ATP-binding protein	Rhodococcus erythropolis PR4	Rhodococcus opacus B4	Rhodococcus sp. RHA1	Phosphonate ABC transporter ATP-binding protein
phnE	Nocardia farcinica IFM 10152 Gene: nfa35280: Phosphonate ABC transporter permease protein phnE (TC 3.A.1.9.1)	Rhodococcus erythropolis PR4	Rhodococcus opacus B4	Rhodococcus sp. RHA1	Phosphonate ABC transporter permease protein phnE (TC 3.A.1.9.1)
COG1063	Nocardia farcinica IFM 10152 Gene: nfa35270: Phosphonate catabolism associated alcohol dehydrogenase	Rhodococcus erythropolis PR4	Rhodococcus opacus B4	Rhodococcus sp. RHA1	Phosphonate catabolism associated alcohol dehydrogenase
CRON 2.
phnF	* Nocardia farcinica IFM 10152 Site: position = -71 score = 5.7619 sequence = ATTGGTATAGACCATC Site: position = -24 score = 5.69192 sequence = CTTGGTATAGACCAAA Gene: nfa35320: Transcriptional regulator for phosphonate utilization, GntR family	* Rhodococcus erythropolis PR4 Site: position = -34 score = 5.38123 sequence = ATTGGTATAGACCGAA Site: position = -81 score = 6.05071 sequence = TTTGGTCTAGACCAAT Gene: RER_25650: Transcriptional regulator for phosphonate utilization, GntR family	* Rhodococcus opacus B4 Site: position = -92 score = 5.99198 sequence = ATTGGTATAGACCATT Site: position = -139 score = 5.69055 sequence = TTTGGTCTAGACCAGT Gene: ROP_66370: Transcriptional regulator for phosphonate utilization, GntR family	* Rhodococcus sp. RHA1 Site: position = 7 score = 5.99198 sequence = ATTGGTATAGACCATT Site: position = -40 score = 5.69055 sequence = TTTGGTCTAGACCAGT Gene: RHA1_ro06603: Transcriptional regulator for phosphonate utilization, GntR family	Transcriptional regulator for phosphonate utilization, GntR family

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
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