Regulon of PhnF in Nocardia farcinica IFM 10152

Properties
Regulator type:	Transcription factor
TF locus tag:	nfa35320
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Phosphonate utilization; 2-aminoethylphosphonate utilization
Effector:
Regulog:	PhnF - Nocardiaceae
Statistics of regulated genes:
- Genes	7
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 18 sites [see more]

Member of regulog collections

By taxonomy - Nocardiaceae
By TF family - GntR/Others
By pathway - Phosphonate utilization
By pathway - 2-aminoethylphosphonate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -78 Score: 6 Sequence: ACTGGTCTATACCAAT Position: -31 Score: 5.4 Sequence: ATAGGTCTAGACCATT Locus tag: nfa35260 Name: COG0665 Funciton: Putative FAD dependent oxidoreductase
	nfa35260	COG0665	Putative FAD dependent oxidoreductase
Position: -145 Score: 5.7 Sequence: TTTGGTCTATACCAAG Position: -98 Score: 5.8 Sequence: GATGGTCTATACCAAT Locus tag: nfa35310 Name: phnX Funciton: Phosphonoacetaldehyde hydrolase (EC 3.11.1.1) Locus tag: nfa35300 Name: phnD Funciton: Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) Locus tag: nfa35290 Name: phnC Funciton: Phosphonate ABC transporter ATP-binding protein Locus tag: nfa35280 Name: phnE Funciton: Phosphonate ABC transporter permease protein phnE (TC 3.A.1.9.1) Locus tag: nfa35270 Name: COG1063 Funciton: Phosphonate catabolism associated alcohol dehydrogenase
	nfa35310	phnX	Phosphonoacetaldehyde hydrolase (EC 3.11.1.1)
	nfa35300	phnD	Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)
	nfa35290	phnC	Phosphonate ABC transporter ATP-binding protein
	nfa35280	phnE	Phosphonate ABC transporter permease protein phnE (TC 3.A.1.9.1)
	nfa35270	COG1063	Phosphonate catabolism associated alcohol dehydrogenase
Position: -71 Score: 5.8 Sequence: ATTGGTATAGACCATC Position: -24 Score: 5.7 Sequence: CTTGGTATAGACCAAA Locus tag: nfa35320 Name: phnF Funciton: Transcriptional regulator for phosphonate utilization, GntR family
	nfa35320	phnF	Transcriptional regulator for phosphonate utilization, GntR family

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD