Regulon of LexA in Rhodococcus opacus B4

Properties
Regulator type:	Transcription factor
TF locus tag:	ROP_31520, ROP_67740
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Nocardiaceae
Statistics of regulated genes:
- Genes	11
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 33 sites [see more]

Member of regulog collections

By trascription factor - LexA
By taxonomy - Nocardiaceae
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -37 Score: 5.1 Sequence: GGGAACATACGTTCGA Locus tag: ROP_49990 Name: alkB Funciton: DNA repair system specific for alkylated DNA
	ROP_49990	alkB	DNA repair system specific for alkylated DNA
Position: -36 Score: 5.6 Sequence: TCGAACAGCTGTTCGG Locus tag: ROP_68710 Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) Locus tag: ROP_68720 Name: ruvA Funciton: Holliday junction DNA helicase RuvA Locus tag: ROP_68730 Name: ruvB Funciton: Holliday junction DNA helicase RuvB
	ROP_68710	ruvC	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
	ROP_68720	ruvA	Holliday junction DNA helicase RuvA
	ROP_68730	ruvB	Holliday junction DNA helicase RuvB
Position: -192 Score: 5.2 Sequence: TCGATCACCCGTTCGA Position: -176 Score: 5.1 Sequence: AAGAACACATGTTCGA Position: -113 Score: 5.6 Sequence: TCGAACAGATGTTTGA Locus tag: ROP_67740 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	ROP_67740	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -110 Score: 5 Sequence: TCGAACACACGTTCCC Locus tag: ROP_67510 Name: recA Funciton: Recombinase A Locus tag: ROP_67520 Name: recX Funciton: Regulatory protein RecX
	ROP_67510	recA	Recombinase A
	ROP_67520	recX	Regulatory protein RecX
Position: -14 Score: 5.3 Sequence: GCGAACATATGTTCGT Locus tag: ROP_10970 Name: dinB Funciton: DNA polymerase IV (EC 2.7.7.7)
	ROP_10970	dinB	DNA polymerase IV (EC 2.7.7.7)
Position: -100 Score: 5.1 Sequence: TCGAAAATACGTTCGA Locus tag: ROP_62720 Name: nfa9050 Funciton: Recombinase-like hypothetical protein Locus tag: ROP_62730 Name: COG0389 Funciton: DNA polymerase-like protein PA0670
	ROP_62720	nfa9050	Recombinase-like hypothetical protein
	ROP_62730	COG0389	DNA polymerase-like protein PA0670
Position: -90 Score: 5.3 Sequence: TCGAACGCCAGTTCGA Locus tag: ROP_62860 Name: dnaE2 Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
	ROP_62860	dnaE2	DNA polymerase III alpha subunit (EC 2.7.7.7)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD