Profile of regulator LexA in Nocardiaceae
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Nocardiaceae |
Member of regulog collections
- By trascription factor - LexA
- By taxonomy - Nocardiaceae
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Nocardia farcinica IFM 10152 | |||||
| nfa38000 | lexA | -159 | 5.5 | TCGATCACATGTTCGA | |
| nfa38000 | lexA | -78 | 5.6 | TCGAACAGATGTTTGA | |
| nfa9140 | nfa9140 | -21 | 5.5 | TCGAACATATGTGCGA | |
| nfa36970 | ruvC | -35 | 5.3 | TCGAACAGTTGTTCGT | |
| nfa9050 | nfa9050 | -79 | 5.1 | TCGAACGTATATTCGA | |
| nfa26700 | dinB | -8 | 5.2 | GCGAACATGTGTTCGT | |
| nfa38430 | recA | -108 | 5.5 | TCGAACACCTGTTCGT | |
| Rhodococcus erythropolis PR4 | |||||
| RER_46860 | alkB | -28 | 5.3 | GGGAACATATGTTCGA | |
| RER_27760 | lexA | -202 | 5.6 | TCGAACAGATGTTTGA | |
| RER_19790 | dnaE2 | -99 | 5.6 | TCGAACATCAGTTCGA | |
| RER_29230 | ruvC | -35 | 5.6 | TCGAACAGCTGTTCGG | |
| pREC1_0098 | nfa9050 | -57 | 5.5 | TCGAACATATGTGCGA | |
| pREL1_0107 | nfa9050 | -24 | 5.3 | TCGAACCTGTGTTCGA | |
| RER_37190 | dinB | -8 | 4.9 | GGGAACATATGTTCGT | |
| RER_27530 | recA | -254 | 5.4 | TCGAACACGTGTTCGT | |
| Rhodococcus opacus B4 | |||||
| ROP_49990 | alkB | -37 | 5.1 | GGGAACATACGTTCGA | |
| ROP_67740 | lexA | -192 | 5.2 | TCGATCACCCGTTCGA | |
| ROP_67740 | lexA | -176 | 5.1 | AAGAACACATGTTCGA | |
| ROP_67740 | lexA | -113 | 5.6 | TCGAACAGATGTTTGA | |
| ROP_62860 | dnaE2 | -90 | 5.3 | TCGAACGCCAGTTCGA | |
| ROP_68710 | ruvC | -36 | 5.6 | TCGAACAGCTGTTCGG | |
| ROP_62720 | nfa9050 | -100 | 5.1 | TCGAAAATACGTTCGA | |
| ROP_10970 | dinB | -14 | 5.3 | GCGAACATATGTTCGT | |
| ROP_67510 | recA | -110 | 5 | TCGAACACACGTTCCC | |
| Rhodococcus sp. RHA1 | |||||
| RHA1_ro04932 | alkB | -36 | 4.8 | GTGAACATACGTTCGA | |
| RHA1_ro06788 | lexA | -192 | 5.2 | TCGATCACGCGTTCGA | |
| RHA1_ro06788 | lexA | -176 | 5.1 | AAGAACACATGTTCGA | |
| RHA1_ro06788 | lexA | -113 | 5.6 | TCGAACAGATGTTTGA | |
| RHA1_ro06227 | dnaE2 | -89 | 5.3 | TCGAACTCCCGTTCGA | |
| RHA1_ro06892 | ruvC | -36 | 5.6 | TCGAACAGCTGTTCGG | |
| RHA1_ro06212 | nfa9050 | -64 | 5.1 | TCGAAAATACGTTCGA | |
| RHA1_ro01383 | dinB | -8 | 5.3 | GCGAACATATGTTCGT | |
| RHA1_ro06765 | recA | -111 | 5 | TCGAACACACGTTCCC | |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |