Regulons of Polaromonas naphthalenivorans CJ2

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	Aave_3430			2	2
TF	CadR-PbrR	Lead ion, (Pb2+); Cadmium, ion (Cd2+)	Lead resistance; Cadmium resistance	1	1
TF	CueR	Copper ion, (Cu+)	Copper resistance	2	2
TF	Daci_0595		Metabolite transport	1	1
TF	FadP		Fatty acid degradation	7	4
TF	GabR	Gamma-aminobutyric acid	Gamma-aminobutyrate utilization	1	1
TF	GabR2	Gamma-aminobutyric acid	Gamma-aminobutyrate utilization	1	1
TF	GguR		Glucarate utilization; Galactarate utilization; Galacturonate utilization; Glucuronate utilization	3	2
TF	GntR	Gluconate	Gluconate utilization	3	3
TF	GudR		Glucarate utilization	2	1
TF	HexR	2-keto-3-deoxy-6-phosphogluconate	Central carbohydrate metabolism	6	3
TF	HrcA	Heat shock	Heat shock response	2	2
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	1	1
TF	LexA	DNA damage	SOS response	7	5
TF	LiuR		Branched-chain amino acid degradation	6	10
TF	ModE3	Tungsten	Tungsten homeostasis	3	2
TF	NmlR	Diamide	Carbonyl stress response	1	1
TF	NorR	Nitric oxide	Nitrosative stress response	2	2
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	2
TF	NrtR	Adenosine diphosphate ribose	NAD biosynthesis	2	4
TF	NsrR	Nitric oxide	Nitrosative stress response	5	6
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	4	5
TF	SdhR		Tricarboxylic acid cycle	4	3
TF	UxuR2		Glucuronate utilization; Galacturonate utilization	4	8
TF	VanR	Vanillate	Vanillate utilization	1	2
TF	YdcR			2	1
TF	YrdX			3	4
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	2	4
RNA	SAH_riboswitch	S-adenosylhomocysteine	Methionine metabolism	2	2
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	4	1

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --