Regulon of GabR in Polaromonas naphthalenivorans CJ2
| Regulator type: | Transcription factor |
| TF locus tag: | Pnap_2866 |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Gamma-aminobutyrate utilization |
| Effector: | Gamma-aminobutyric acid |
| Regulog: | GabR - Comamonadaceae |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 1 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Comamonadaceae
- By TF family - GntR/MocR
- By effector - Gamma-aminobutyric acid
- By pathway - Gamma-aminobutyrate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -153
Score: 12.8 Sequence: AGTGGCAC-(15)-AATGGCAC-(7)-GACCCAAT
Locus tag: Pnap_2865
Name: puuD Funciton: Gamma-glutamyl-gamma-aminobutyrate hydrolase (EC 3.5.1.94)
Locus tag: Pnap_2864
Name: puuA Funciton: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11)
Locus tag: Pnap_2863
Name: gatP Funciton: Gamma-aminobutyrate transaminase (EC 2.6.1.96)
Locus tag: Pnap_2862
Name: puuO Funciton: Predicted putrescine ABC transporter, periplasmic binding protein
Locus tag: Pnap_2861
Name: puuL Funciton: Predicted putrescine ABC transporter, ATP-binding protein
Locus tag: Pnap_2860
Name: puuM Funciton: Predicted putrescine ABC transporter, permease component
Locus tag: Pnap_2859
Name: puuN Funciton: Predicted putrescine ABC transporter, permease component |
|||
|
puuD
|
Gamma-glutamyl-gamma-aminobutyrate hydrolase (EC 3.5.1.94)
|
||
|
puuA
|
Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11)
|
||
|
gatP
|
Gamma-aminobutyrate transaminase (EC 2.6.1.96)
|
||
|
puuO
|
Predicted putrescine ABC transporter, periplasmic binding protein
|
||
|
puuL
|
Predicted putrescine ABC transporter, ATP-binding protein
|
||
|
puuM
|
Predicted putrescine ABC transporter, permease component
|
||
|
puuN
|
Predicted putrescine ABC transporter, permease component
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |