Regulon of UxuR2 in Polaromonas naphthalenivorans CJ2
| Regulator type: | Transcription factor |
| TF locus tag: | Pnap_2075 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Glucuronate utilization; Galacturonate utilization |
| Effector: | |
| Regulog: | UxuR2 - Comamonadaceae |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Comamonadaceae
- By TF family - GntR/Others
- By pathway - Glucuronate utilization
- By pathway - Galacturonate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -188
Score: 5.1 Sequence: TATTTGGTAAGGCCAATTT
Position: -156
Score: 3.9 Sequence: AGATTGGCCTTACCGTATA
Position: -15
Score: 4.3 Sequence: CTTTCGGTCAGGCCAATGT
Position: -1
Score: 4.9 Sequence: AATGTGGCCTGACCAAATA
Locus tag: Pnap_2075
Name: uxuR2-2 Funciton: Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family |
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uxuR2-2
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Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family
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Position: -262
Score: 4.9 Sequence: TATTTGGTCAGGCCACATT
Position: -248
Score: 4.3 Sequence: ACATTGGCCTGACCGAAAG
Position: -107
Score: 3.9 Sequence: TATACGGTAAGGCCAATCT
Position: -75
Score: 5.1 Sequence: AAATTGGCCTTACCAAATA
Locus tag: Pnap_2074
Name: null Funciton: polar amino acid ABC transporter, inner membrane subunit
Locus tag: Pnap_2073
Name: null Funciton: polar amino acid ABC transporter, inner membrane subunit
Locus tag: Pnap_2072
Name: null Funciton: ABC transporter related
Locus tag: Pnap_2071
Name: null Funciton: extracellular solute-binding protein, family 3
Locus tag: Pnap_2070
Name: null Funciton: Alcohol dehydrogenase GroES domain protein
Locus tag: Pnap_2069
Name: mtlD2 Funciton: Mannitol dehydrogenase, C-terminal domain
Locus tag: Pnap_2068
Name: uxaA Funciton: Altronate dehydratase
Locus tag: Pnap_2067
Name: Pnap_1486 Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) |
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polar amino acid ABC transporter, inner membrane subunit
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polar amino acid ABC transporter, inner membrane subunit
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ABC transporter related
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extracellular solute-binding protein, family 3
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Alcohol dehydrogenase GroES domain protein
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mtlD2
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Mannitol dehydrogenase, C-terminal domain
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uxaA
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Altronate dehydratase
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Pnap_1486
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2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |