Regulon of GguR in Polaromonas naphthalenivorans CJ2

Properties
Regulator type:	Transcription factor
TF locus tag:	Pnap_1590
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Glucarate utilization; Galactarate utilization; Galacturonate utilization; Glucuronate utilization
Effector:
Regulog:	GguR - Comamonadaceae
Statistics of regulated genes:
- Genes	12
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 32 sites [see more]

Member of regulog collections

By taxonomy - Comamonadaceae
By trascription factor - GguR
By TF family - GntR/Others
By pathway - Glucarate utilization
By pathway - Galactarate utilization
By pathway - Galacturonate utilization
By pathway - Glucuronate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -58 Score: 4.7 Sequence: ACGTTGTCTGATGACTC Locus tag: Pnap_1590 Name: gguR Funciton: Predicted D-glucarate or D-galactorate utilization regulator, GntR family
	Pnap_1590	gguR	Predicted D-glucarate or D-galactorate utilization regulator, GntR family
Position: -98 Score: 4.7 Sequence: GAGTCATCAGACAACGT Locus tag: Pnap_1591 Name: udh Funciton: Uronate dehydrogenase (EC 1.1.1.203) Locus tag: Pnap_1592 Name: uxuL1 Funciton: Predicted glucuronolactone/galactarolactone lactonase Locus tag: Pnap_1593 Name: uxuP Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component Locus tag: Pnap_1594 Name: uxuQ Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, small permease component Locus tag: Pnap_1595 Name: uxuM Funciton: Predicted glucuronate /galacturonate TRAP-type transporter, large permease component Locus tag: Pnap_1596 Name: kdgD Funciton: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) Locus tag: Pnap_1597 Name: garD Funciton: D-galactarate dehydratase (EC 4.2.1.42) Locus tag: Pnap_1598 Name: kgsD Funciton: Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) Locus tag: Pnap_1599 Name: garL Funciton: 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20) Locus tag: Pnap_1600 Name: garR Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) Locus tag: Pnap_1601 Name: tctC1 Funciton: Tripartite tricarboxylate transporter family receptor, putative transporter for uronates
	Pnap_1591	udh	Uronate dehydrogenase (EC 1.1.1.203)
	Pnap_1592	uxuL1	Predicted glucuronolactone/galactarolactone lactonase
	Pnap_1593	uxuP	Predicted glucuronate /galacturonate TRAP-type transporter, periplasmic component
	Pnap_1594	uxuQ	Predicted glucuronate /galacturonate TRAP-type transporter, small permease component
	Pnap_1595	uxuM	Predicted glucuronate /galacturonate TRAP-type transporter, large permease component
	Pnap_1596	kdgD	5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
	Pnap_1597	garD	D-galactarate dehydratase (EC 4.2.1.42)
	Pnap_1598	kgsD	Alpha-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
	Pnap_1599	garL	2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20)
	Pnap_1600	garR	2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
	Pnap_1601	tctC1	Tripartite tricarboxylate transporter family receptor, putative transporter for uronates

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD