Regulon of FadP in Polaromonas naphthalenivorans CJ2

Properties
Regulator type:	Transcription factor
TF locus tag:	Pnap_3478
Regulator family:	TetR
Regulation mode:
Biological process:	Fatty acid degradation
Effector:
Regulog:	FadP - Comamonadaceae
Statistics of regulated genes:
- Genes	13
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 46 sites [see more]

Member of regulog collections

By trascription factor - FadP
By taxonomy - Comamonadaceae
By TF family - TetR
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -31 Score: 5.7 Sequence: TAGAACGACCGTTCTT Locus tag: Pnap_3478 Name: fadP Funciton: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family Locus tag: Pnap_3477 Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3) Locus tag: Pnap_3476 Name: acdB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Locus tag: Pnap_3475 Name: null Funciton: hypothetical protein Locus tag: Pnap_3474 Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Locus tag: Pnap_3473 Name: echH Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
	Pnap_3478	fadP	Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
	Pnap_3477	acdH	Acyl-CoA dehydrogenase (EC 1.3.99.3)
	Pnap_3476	acdB	Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
	Pnap_3475		hypothetical protein
	Pnap_3474	acdA	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
	Pnap_3473	echH	Enoyl-CoA hydratase (EC 4.2.1.17)
Position: -147 Score: 5.7 Sequence: TAGAACGACCGTTCTT Locus tag: Pnap_1223 Name: etfB Funciton: Electron transfer flavoprotein, beta subunit Locus tag: Pnap_1224 Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit Locus tag: Pnap_1225 Name: acdH2 Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3) Locus tag: Pnap_1226 Name: null Funciton: Dioxygenases related to 2-nitropropane dioxygenase
	Pnap_1223	etfB	Electron transfer flavoprotein, beta subunit
	Pnap_1224	etfA	Electron transfer flavoprotein, alpha subunit
	Pnap_1225	acdH2	Acyl-CoA dehydrogenase (EC 1.3.99.3)
	Pnap_1226		Dioxygenases related to 2-nitropropane dioxygenase
Position: -106 Score: 4.9 Sequence: AAGAACGGTCGTACTA Locus tag: Pnap_1842 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Locus tag: Pnap_1843 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	Pnap_1842	fadB	Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
	Pnap_1843	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Position: -41 Score: 5.5 Sequence: AAGAACGACCGTTCTA Locus tag: Pnap_3655 Name: null Funciton: FIG026291: Hypothetical periplasmic protein
	Pnap_3655		FIG026291: Hypothetical periplasmic protein

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