Profile of regulator FadP in Comamonadaceae
Properties
| Regulator family: |
TetR |
| Regulation mode: |
|
| Biological process: |
Fatty acid degradation |
| Effector: |
|
| Regulog: |
FadP - Comamonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Acidovorax avenae subsp. citrulli AAC00-1
|
|
Aave_2880 |
fadB |
-41 |
5.3 |
AAGCACGACCGTTCTT |
|
Aave_2168 |
etfB |
-142 |
5.3 |
AAGCACGATCGTTCTT |
|
Aave_3139 |
etfD |
-121 |
5.4 |
AAGAACGATCGTTCGT |
|
Aave_0441 |
null |
-31 |
5.3 |
AAGAACGATCGTGCTT |
|
Aave_3439 |
acdQ |
-66 |
5.3 |
AAGCACGACCGTGCTA |
|
Acidovorax sp. JS42
|
|
Ajs_2810 |
etfB |
-122 |
5.3 |
AAGCACGATCGTTCGT |
|
Ajs_1950 |
etfD |
-117 |
4.9 |
GTGAACGACCGTGCGA |
|
Ajs_0591 |
fadP |
-29 |
5.7 |
TAGAACGATCGTTCGT |
|
Ajs_0365 |
null |
-31 |
5.3 |
ACGAACGATCGTTCTT |
|
Ajs_3393 |
acdQ |
-43 |
4.7 |
AAGCACGCCCGTGCTA |
|
Comamonas testosteroni KF-1
|
|
CtesDRAFT_0956 |
fadB |
-44 |
5.2 |
ACGCACGACCGTTCTT |
|
CtesDRAFT_3565 |
null |
-69 |
5 |
ATGCACGACCGTTCGC |
|
CtesDRAFT_3123 |
fadP |
-31 |
5.1 |
TAGAACGAACGTTCGT |
|
Delftia acidovorans SPH-1
|
|
Daci_3313 |
fadB |
-41 |
5.5 |
TCGCACGATCGTTCTT |
|
Daci_2390 |
etfB |
-138 |
5.2 |
TGGCACGATCGTTCTT |
|
Daci_4310 |
etfD |
-60 |
4.5 |
CCGAACGAACGTTCGG |
|
Daci_1336 |
fadP |
-33 |
5 |
TAGCACGAACGTTCGT |
|
Polaromonas naphthalenivorans CJ2
|
|
Pnap_1842 |
fadB |
-106 |
4.9 |
AAGAACGGTCGTACTA |
|
Pnap_1223 |
etfB |
-147 |
5.7 |
TAGAACGACCGTTCTT |
|
Pnap_3478 |
fadP |
-31 |
5.7 |
TAGAACGACCGTTCTT |
|
Pnap_3655 |
null |
-41 |
5.5 |
AAGAACGACCGTTCTA |
|
Polaromonas sp. JS666
|
|
Bpro_3958 |
fadP |
-35 |
5.7 |
TAGAACGATCGTTCGT |
|
Bpro_3143 |
etfB |
-142 |
5.7 |
TAGAACGACCGTTCTT |
|
Bpro_4459 |
null |
-56 |
5.5 |
AAGAACGACCGTTCTA |
|
Bpro_2573 |
fadB |
-86 |
4.9 |
AAGAACGGTCGTACTA |
|
Rhodoferax ferrireducens DSM 15236
|
|
Rfer_2386 |
fadB |
-40 |
5.7 |
TCGCACGATCGTTCTA |
|
Rfer_1957 |
etfB |
-163 |
5 |
AAGCACGACCGTACTA |
|
Rfer_3018 |
etfD |
-85 |
5.5 |
AAGAACGATCGTTCTA |
|
Rfer_3520 |
fadP |
-26 |
5.6 |
TAGCACGATCGTTCTT |
|
Rfer_3608 |
null |
-29 |
5.5 |
TAGCACGGTCGTTCTA |
|
Rfer_1646 |
acdQ |
-144 |
5.5 |
TCGCACGATCGTGCTA |
|
Variovorax paradoxus S110
|
|
Vapar_3374 |
etfB |
-131 |
5.1 |
AAGCACGGTCGTTCTT |
|
Vapar_0809 |
fadP |
-36 |
5.7 |
TAGAACGACCGTTCGT |
|
Vapar_0572 |
null |
-32 |
5.5 |
TCGAACGATCGTTCGC |
|
Vapar_1274 |
acdQ |
-87 |
5.2 |
CAGCACGACCGTGCTA |
|
Verminephrobacter eiseniae EF01-2
|
|
Veis_1792 |
fadB |
-40 |
4.6 |
ACGCACGCCCGTTCTT |
|
Veis_2104 |
acdQ |
-49 |
5.3 |
ACGAACGATCGTGCTA |
|
Veis_1225 |
fadP |
31 |
5.7 |
TAGAACGATCGTTCTT |
|
Veis_3981 |
etfD |
-103 |
5 |
TGGAACGGTCGTTCGC |
|
Methylibium petroleiphilum PM1
|
|
Mpe_A1775 |
fadB |
-47 |
5.7 |
TCGAACGATCGTTCTA |
|
Mpe_A1296 |
etfB |
-98 |
5.1 |
CCGAACGATCGTGCTT |
|
Mpe_A0420 |
fadP |
-34 |
5.8 |
TAGAACGATCGTTCGA |
|
Mpe_A1443 |
etfD |
-87 |
5.7 |
TAGAACGACCGTTCGT |
|
Leptothrix cholodnii SP-6
|
|
Lcho_2540 |
etfB |
-99 |
5.3 |
TAGTACGATCGTGCTT |
|
Lcho_4033 |
fadP |
-30 |
5.7 |
TAGCACGATCGTTCGA |
|
Lcho_2069 |
etfD |
-108 |
5.1 |
AAGCACGGTCGTGCTA |
Export
|
Regulatory Sites
|
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