Regulon of YrdX in Polaromonas naphthalenivorans CJ2

Properties
Regulator type:	Transcription factor
TF locus tag:	Pnap_2106
Regulator family:	GntR/MocR
Regulation mode:
Biological process:
Effector:
Regulog:	YrdX - Comamonadaceae
Statistics of regulated genes:
- Genes	6
- Operons	1
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 11 sites [see more]

Member of regulog collections

By taxonomy - Comamonadaceae
By TF family - GntR/MocR

Regulated operons
	Locus Tag	Name	Function
Position: -324 Score: 6.6 Sequence: CTTGATTG-(5)-CTTGATTG Position: -320 Score: 5.1 Sequence: ATTGCATG-(5)-ATTGCATT Position: -224 Score: 6.1 Sequence: GTTTATCG-(5)-ATTGATTG Position: -105 Score: 6.6 Sequence: ATTGATTG-(3)-CTTGATTG Locus tag: Pnap_2105 Name: PF02635 Funciton: probable GTP cyclohydrolase II/ATPase/Sulphur relay, DsrE/F-like protein Locus tag: Pnap_2104 Name: COG388 Funciton: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (EC 3.5.5.7) Locus tag: Pnap_2103 Name: COG2516 Funciton: Biotin synthase-related radical SAM domain protein Locus tag: Pnap_2102 Name: COG3153 Funciton: GCN5-related N-acetyltransferase Locus tag: Pnap_2101 Name: COG2144 Funciton: AIR synthase related protein/Selenophosphate synthetase-related Locus tag: Pnap_2100 Name: COG438 (RfaG) Funciton: Glycosyltransferase
	Pnap_2105	PF02635	probable GTP cyclohydrolase II/ATPase/Sulphur relay, DsrE/F-like protein
	Pnap_2104	COG388	Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (EC 3.5.5.7)
	Pnap_2103	COG2516	Biotin synthase-related radical SAM domain protein
	Pnap_2102	COG3153	GCN5-related N-acetyltransferase
	Pnap_2101	COG2144	AIR synthase related protein/Selenophosphate synthetase-related
	Pnap_2100	COG438 (RfaG)	Glycosyltransferase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD