Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator YrdX in Comamonadaceae

Properties
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Regulog: YrdX - Comamonadaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Methylibium petroleiphilum PM1
Mpe_A3479 PF02635 -271 7.1 GTTGATCG-(5)-ATTGATCG
Mpe_A3479 PF02635 -139 7.2 CTTGATCG-(3)-ATTGATCG
Mpe_A3479 PF02635 -92 4.8 GTGGCACA-(3)-CGTGCAAA
Polaromonas naphthalenivorans CJ2
Pnap_2105 PF02635 -320 5.1 ATTGCATG-(5)-ATTGCATT
Pnap_2105 PF02635 -224 6.1 GTTTATCG-(5)-ATTGATTG
Pnap_2105 PF02635 -105 6.6 ATTGATTG-(3)-CTTGATTG
Pnap_2105 PF02635 -324 6.6 CTTGATTG-(5)-CTTGATTG
Variovorax paradoxus S110
Vapar_0562 PF02635 -343 6.8 GTTGATCG-(5)-ATTGATTG
Vapar_0562 PF02635 -242 7.1 GTTGATCG-(5)-ATTGATCG
Vapar_0562 PF02635 -111 7.2 ATTGATCG-(3)-ATTGATCG
Vapar_0562 PF02635 -74 4.9 CTGGCACA-(3)-CCTGCAAA
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Regulatory Sites [ FASTA format ] DOWNLOAD