Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Ralstonia eutropha JMP134

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF CadR-PbrR Lead ion, (Pb2+); Cadmium, ion (Cd2+) Lead resistance; Cadmium resistance 2 2
TF CueR Copper ion, (Cu+) Copper resistance 2 2
TF Dnr Nitric oxide Denitrification 1 1
TF FadP Fatty acid degradation 16 15
TF FdsR Formate Formate oxydation 2 4
TF Fur Iron ion, (Fe2+) Iron homeostasis 11 11
TF GguR Glucarate utilization; Galactarate utilization 5 8
TF H16_A0963 1 1
TF H16_A0970 2 2
TF H16_A2655 Metabolite transport 2 2
TF H16_B0275 2 2
TF H16_B1411 2 1
TF H16_B1468 2 2
TF H16_B1761 2 2
TF HexR 2-keto-3-deoxy-6-phosphogluconate Central carbohydrate metabolism 3 4
TF HpxR Xanthine Xanthine utilization 1 1
TF HrcA Heat shock Heat shock response 2 2
TF HutC cis-Urocanic acid Histidine utilization 7 5
TF IscR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 1 2
TF LexA DNA damage SOS response 10 11
TF LiuQ Branched-chain amino acid degradation 2 4
TF LiuR Branched-chain amino acid degradation 6 8
TF LldR L-lactate Lactate utilization 2 2
TF MerR Mercury ion, (Hg2+) Mercury resistance 2 2
TF MetR Homocysteine Methionine biosynthesis 2 2
TF MlnR Malonate metabolism 1 1
TF ModE Molybdate Molybdenum homeostasis 1 1
TF ModE3 Tungsten Tungsten homeostasis 2 2
TF NorR Nitric oxide Nitrosative stress response 2 5
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 1 1
TF NsrR Nitric oxide Nitrosative stress response 2 2
TF NtrC Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 5 6
TF OapR Gamma-aminobutyrate utilization 1 1
TF PaaR Phenylacetyl-CoA Phenylacetic acid degradation 4 3
TF PhnF Phosphonate utilization 2 2
TF PhnR2 2-aminoethylphosphonate 2-aminoethylphosphonate utilization 4 4
TF PsrA Oleate Fatty acid degradation 2 2
TF RALTA_A0216 1 1
TF Reut_C5892 Sugar utilization 1 1
TF Rmet_4647 2 2
TF Rmet_5631 Glycolate utilization; Lactate utilization 2 4
TF RutR Uracil Pyrimidine utilization 1 1
TF SdaR Glucuronate utilization; Glucarate utilization; Galactarate utilization 1 1
TF SdhR Tricarboxylic acid cycle 7 5
TF TalR L-talarate L-talarate utilization 2 4
TF TauR Taurine Taurine utilization 3 2
TF UraR Uracil Pyrimidine utilization 3 5
TF YdcR 2 2
TF YrdX3 3 2
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 3 2
RNA Cobalamin Adenosylcobalamin Cobalamin biosynthesis 1 1
RNA FMN Flavin mononucleotide Riboflavin biosynthesis 1 1
RNA Glycine Glycine Glycine metabolism 3 4
RNA SAH_riboswitch S-adenosylhomocysteine Methionine metabolism 1 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 1 1
RNA mini-ykkC Multidrug resistance 1 1
RNA sucA Tricarboxylic acid cycle 1 1
RNA ykkC-yxkD Multidrug resistance 2 2
RNA yybP-ykoY 1 1
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