Regulon of NtrC in Ralstonia eutropha JMP134

Properties
Regulator type:	Transcription factor
TF locus tag:	Reut_A2054
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Ralstonia
Statistics of regulated genes:
- Genes	15
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 28 sites [see more]

Member of regulog collections

By taxonomy - Ralstonia
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -232 Score: 4.7 Sequence: TGCACCACTAAGGTTCA Position: -91 Score: 4.6 Sequence: TCCACCATGAAGGTGCA Locus tag: Reut_B4038 Name: amtB Funciton: Ammonium transporter
	Reut_B4038	amtB	Ammonium transporter
Position: -80 Score: 4.6 Sequence: AGCACCATCAAGGGGCG Locus tag: Reut_A2056 Name: ntrZ Funciton: Conserved hypothetical signal peptide protein Locus tag: Reut_A2055 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: Reut_A2054 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	Reut_A2056	ntrZ	Conserved hypothetical signal peptide protein
	Reut_A2055	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	Reut_A2054	ntrC	Nitrogen regulation protein NR(I), Fis family
Position: -319 Score: 4.9 Sequence: CGCACCGTTATGGTGTT Locus tag: Reut_A2057 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	Reut_A2057	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -271 Score: 4.2 Sequence: CGCACCATGACTGTGCC Locus tag: Reut_B4859 Name: narK Funciton: Nitrate/nitrite antiporter Locus tag: Reut_B4860 Name: nasD Funciton: Nitrite reductase, large subunit (EC 1.7.1.4) Locus tag: Reut_B4861 Name: nasE Funciton: Nitrite reductase, small subunit (EC 1.7.1.4) Locus tag: Reut_B4862 Name: nasB Funciton: Assimilatory nitrate reductase, small subunit (EC:1.7.99.4) Locus tag: Reut_B4863 Name: nasA Funciton: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
	Reut_B4859	narK	Nitrate/nitrite antiporter
	Reut_B4860	nasD	Nitrite reductase, large subunit (EC 1.7.1.4)
	Reut_B4861	nasE	Nitrite reductase, small subunit (EC 1.7.1.4)
	Reut_B4862	nasB	Assimilatory nitrate reductase, small subunit (EC:1.7.99.4)
	Reut_B4863	nasA	Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
Position: -93 Score: 4.9 Sequence: CGCACCAAAATGCAGCG Locus tag: Reut_A3006 Name: dppA Funciton: Dipeptide ABC transporter, substrate-binding component Locus tag: Reut_A3005 Name: dppB Funciton: Dipeptide ABC transporter, permease component 1 Locus tag: Reut_A3004 Name: dppC Funciton: Dipeptide ABC transporter, permease component 2 Locus tag: Reut_A3003 Name: dppD Funciton: Dipeptide ABC transporter, ATP-binding component 1 Locus tag: Reut_A3002 Name: dppF Funciton: Dipeptide ABC transporter, ATP-binding component 2
	Reut_A3006	dppA	Dipeptide ABC transporter, substrate-binding component
	Reut_A3005	dppB	Dipeptide ABC transporter, permease component 1
	Reut_A3004	dppC	Dipeptide ABC transporter, permease component 2
	Reut_A3003	dppD	Dipeptide ABC transporter, ATP-binding component 1
	Reut_A3002	dppF	Dipeptide ABC transporter, ATP-binding component 2

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of NtrC in Ralstonia eutropha JMP134

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --