Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NtrC in Ralstonia eutropha JMP134

Properties
Regulator type: Transcription factor
TF locus tag: Reut_A2054
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Regulog: NtrC - Ralstonia
Statistics of regulated genes:
- Genes 15
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 28 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -232
Score: 4.7
Sequence: TGCACCACTAAGGTTCA
Position: -91
Score: 4.6
Sequence: TCCACCATGAAGGTGCA
Locus tag: Reut_B4038
Name: amtB
Funciton: Ammonium transporter
amtB
Ammonium transporter

Position: -80
Score: 4.6
Sequence: AGCACCATCAAGGGGCG
Locus tag: Reut_A2056
Name: ntrZ
Funciton: Conserved hypothetical signal peptide protein
Locus tag: Reut_A2055
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: Reut_A2054
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
ntrZ
Conserved hypothetical signal peptide protein
ntrB
Nitrogen regulation protein NR(II) (EC 2.7.3.-)
ntrC
Nitrogen regulation protein NR(I), Fis family

Position: -319
Score: 4.9
Sequence: CGCACCGTTATGGTGTT
Locus tag: Reut_A2057
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnA
Glutamine synthetase type I (EC 6.3.1.2)

Position: -271
Score: 4.2
Sequence: CGCACCATGACTGTGCC
Locus tag: Reut_B4859
Name: narK
Funciton: Nitrate/nitrite antiporter
Locus tag: Reut_B4860
Name: nasD
Funciton: Nitrite reductase, large subunit (EC 1.7.1.4)
Locus tag: Reut_B4861
Name: nasE
Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
Locus tag: Reut_B4862
Name: nasB
Funciton: Assimilatory nitrate reductase, small subunit (EC:1.7.99.4)
Locus tag: Reut_B4863
Name: nasA
Funciton: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
narK
Nitrate/nitrite antiporter
nasD
Nitrite reductase, large subunit (EC 1.7.1.4)
nasE
Nitrite reductase, small subunit (EC 1.7.1.4)
nasB
Assimilatory nitrate reductase, small subunit (EC:1.7.99.4)
nasA
Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)

Position: -93
Score: 4.9
Sequence: CGCACCAAAATGCAGCG
Locus tag: Reut_A3006
Name: dppA
Funciton: Dipeptide ABC transporter, substrate-binding component
Locus tag: Reut_A3005
Name: dppB
Funciton: Dipeptide ABC transporter, permease component 1
Locus tag: Reut_A3004
Name: dppC
Funciton: Dipeptide ABC transporter, permease component 2
Locus tag: Reut_A3003
Name: dppD
Funciton: Dipeptide ABC transporter, ATP-binding component 1
Locus tag: Reut_A3002
Name: dppF
Funciton: Dipeptide ABC transporter, ATP-binding component 2
dppA
Dipeptide ABC transporter, substrate-binding component
dppB
Dipeptide ABC transporter, permease component 1
dppC
Dipeptide ABC transporter, permease component 2
dppD
Dipeptide ABC transporter, ATP-binding component 1
dppF
Dipeptide ABC transporter, ATP-binding component 2
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