Regulon of LiuR in Ralstonia eutropha JMP134
| Regulator type: | Transcription factor |
| TF locus tag: | Reut_A0133 |
| Regulator family: | MerR |
| Regulation mode: | |
| Biological process: | Branched-chain amino acid degradation |
| Effector: | |
| Regulog: | LiuR - Ralstonia |
| Statistics of regulated genes: | |
| - Genes | 16 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - LiuR
- By taxonomy - Ralstonia
- By TF family - MerR
- By pathway - Branched-chain amino acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -56
Score: 6.6 Sequence: GTTGACGTTTACGTAAAC
Position: -50
Score: 4.5 Sequence: GTTTACGTAAACGGCAGT
Locus tag: Reut_A0589
Name: paaH Funciton: 3-hydroxyacyl-CoA dehydrogenase |
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paaH
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3-hydroxyacyl-CoA dehydrogenase
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Position: -155
Score: 6.2 Sequence: GTTGACGTTTACGTTAGC
Position: -149
Score: 5.5 Sequence: GTTTACGTTAGCGTCAAC
Locus tag: Reut_A0132
Name: null Funciton: Metallo-beta-lactamase family protein |
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Metallo-beta-lactamase family protein
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Position: -58
Score: 6.6 Sequence: ATTGACGTTTACGTAAAC
Position: -52
Score: 5.3 Sequence: GTTTACGTAAACGTCAAT
Locus tag: Reut_A0134
Name: paaI Funciton: Phenylacetic acid degradation-related protein
Locus tag: Reut_A0135
Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: Reut_A0136
Name: aceK Funciton: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
Locus tag: Reut_A0137
Name: cah Funciton: Carbonic anhydrase (EC 4.2.1.1)
Locus tag: Reut_A0138
Name: ivdA Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Locus tag: Reut_A0139
Name: null Funciton: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Locus tag: Reut_A0140
Name: ivdC Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: Reut_A0141
Name: null Funciton: 2-Hydroxychromene-2-carboxylate isomerase
Locus tag: Reut_A0142
Name: null Funciton: Putative phosphatase YieH
Locus tag: Reut_A0143
Name: null Funciton: hypothetical protein
Locus tag: Reut_A0144
Name: null Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) / Glutathione S-transferase
Locus tag: Reut_A0145
Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: Reut_A0146
Name: null Funciton: Dienelactone hydrolase or related enzyme |
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paaI
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Phenylacetic acid degradation-related protein
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liuA
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Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
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aceK
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Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
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cah
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Carbonic anhydrase (EC 4.2.1.1)
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ivdA
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Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
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Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
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ivdC
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Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
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2-Hydroxychromene-2-carboxylate isomerase
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Putative phosphatase YieH
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hypothetical protein
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Maleylacetoacetate isomerase (EC 5.2.1.2) / Glutathione S-transferase
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liuB
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Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
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Dienelactone hydrolase or related enzyme
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Position: -99
Score: 6.4 Sequence: GTTGACGCTAACGTAAAC
Position: -93
Score: 5.1 Sequence: GCTAACGTAAACGTCAAC
Locus tag: Reut_A0133
Name: liuR Funciton: Transcriptional regulator, MerR family |
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liuR
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Transcriptional regulator, MerR family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |