Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LiuR in Ralstonia eutropha JMP134

Properties
Regulator type: Transcription factor
TF locus tag: Reut_A0133
Regulator family: MerR
Regulation mode:
Biological process: Branched-chain amino acid degradation
Effector:
Regulog: LiuR - Ralstonia
Statistics of regulated genes:
- Genes 16
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 57 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -56
Score: 6.6
Sequence: GTTGACGTTTACGTAAAC
Position: -50
Score: 4.5
Sequence: GTTTACGTAAACGGCAGT
Locus tag: Reut_A0589
Name: paaH
Funciton: 3-hydroxyacyl-CoA dehydrogenase
Reut_A0589
paaH
3-hydroxyacyl-CoA dehydrogenase
Position: -155
Score: 6.2
Sequence: GTTGACGTTTACGTTAGC
Position: -149
Score: 5.5
Sequence: GTTTACGTTAGCGTCAAC
Locus tag: Reut_A0132
Name: null
Funciton: Metallo-beta-lactamase family protein
Reut_A0132
Metallo-beta-lactamase family protein
Position: -58
Score: 6.6
Sequence: ATTGACGTTTACGTAAAC
Position: -52
Score: 5.3
Sequence: GTTTACGTAAACGTCAAT
Locus tag: Reut_A0134
Name: paaI
Funciton: Phenylacetic acid degradation-related protein
Locus tag: Reut_A0135
Name: liuA
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: Reut_A0136
Name: aceK
Funciton: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
Locus tag: Reut_A0137
Name: cah
Funciton: Carbonic anhydrase (EC 4.2.1.1)
Locus tag: Reut_A0138
Name: ivdA
Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Locus tag: Reut_A0139
Name: null
Funciton: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Locus tag: Reut_A0140
Name: ivdC
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: Reut_A0141
Name: null
Funciton: 2-Hydroxychromene-2-carboxylate isomerase
Locus tag: Reut_A0142
Name: null
Funciton: Putative phosphatase YieH
Locus tag: Reut_A0143
Name: null
Funciton: hypothetical protein
Locus tag: Reut_A0144
Name: null
Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) / Glutathione S-transferase
Locus tag: Reut_A0145
Name: liuB
Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: Reut_A0146
Name: null
Funciton: Dienelactone hydrolase or related enzyme
Reut_A0134
paaI
Phenylacetic acid degradation-related protein
Reut_A0135
liuA
Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Reut_A0136
aceK
Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
Reut_A0137
cah
Carbonic anhydrase (EC 4.2.1.1)
Reut_A0138
ivdA
Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Reut_A0139
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Reut_A0140
ivdC
Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Reut_A0141
2-Hydroxychromene-2-carboxylate isomerase
Reut_A0142
Putative phosphatase YieH
Reut_A0143
hypothetical protein
Reut_A0144
Maleylacetoacetate isomerase (EC 5.2.1.2) / Glutathione S-transferase
Reut_A0145
liuB
Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Reut_A0146
Dienelactone hydrolase or related enzyme
Position: -99
Score: 6.4
Sequence: GTTGACGCTAACGTAAAC
Position: -93
Score: 5.1
Sequence: GCTAACGTAAACGTCAAC
Locus tag: Reut_A0133
Name: liuR
Funciton: Transcriptional regulator, MerR family
Reut_A0133
liuR
Transcriptional regulator, MerR family
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise