Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of SdhR in Ralstonia eutropha JMP134

Properties
Regulator type: Transcription factor
TF locus tag: Reut_A2326
Regulator family: GntR/Others
Regulation mode:
Biological process: Tricarboxylic acid cycle
Effector:
Regulog: SdhR - Ralstonia
Statistics of regulated genes:
- Genes 13
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 41 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -77
Score: 7.9
Sequence: TCATATGTCTTATATAAGACATAAGA
Locus tag: Reut_A2326
Name: sdhR
Funciton: Transcriptional regulator of TCA cycle, GntR family
Locus tag: Reut_A2325
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Reut_A2324
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Reut_A2323
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Reut_A2322
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Reut_A2321
Name: COG2938
Funciton: succinate dehydrogenase iron-sulfur subunit
Locus tag: Reut_A2320
Name: gltA
Funciton: Citrate synthase (si) (EC 2.3.3.1)
sdhR
Transcriptional regulator of TCA cycle, GntR family
sdhC
Succinate dehydrogenase cytochrome b-556 subunit
sdhD
Succinate dehydrogenase hydrophobic membrane anchor protein
sdhA
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
sdhB
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
COG2938
succinate dehydrogenase iron-sulfur subunit
gltA
Citrate synthase (si) (EC 2.3.3.1)

Position: -327
Score: 7.9
Sequence: TCTTATGTCTTATATAAGACATATGA
Locus tag: Reut_A2327
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: Reut_A2328
Name: citE
Funciton: Citrate lyase beta chain (EC 4.1.3.6)
Locus tag: Reut_A2329
Name: prpC2
Funciton: 2-methylcitrate synthase (EC 2.3.3.5)
mdh
Malate dehydrogenase (EC 1.1.1.37)
citE
Citrate lyase beta chain (EC 4.1.3.6)
prpC2
2-methylcitrate synthase (EC 2.3.3.5)

Position: -134
Score: 6.5
Sequence: TCTTATGTCTTATATAAGACTGACGC
Locus tag: Reut_A0384
Name: aceA2
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceA2
Isocitrate lyase (EC 4.1.3.1)

Position: -124
Score: 5.4
Sequence: CCTACACTCTTATATAAGACAAATGA
Locus tag: Reut_A1961
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
aceA
Isocitrate lyase (EC 4.1.3.1)

Position: -158
Score: 5.8
Sequence: TCTTGTGTCTTATATAAGACTGAAAG
Locus tag: Reut_A2756
Name: icd
Funciton: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
icd
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD