Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator SdhR in Ralstonia

Properties
Regulator family: GntR/Others
Regulation mode:
Biological process: Tricarboxylic acid cycle
Effector:
Regulog: SdhR - Ralstonia
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Cupriavidus taiwanensis
RALTA_B0366 acnB -22 5.8 TCTTATATAAGATATAAGACATTTGA
RALTA_B0366 acnB -29 6.2 GATGAACTCTTATATAAGATATAAGA
RALTA_A1766 aceA -132 5.4 TCTACACTCTTATATAAGACACAGGA
RALTA_A2531 icd -168 6.3 TCTTGTGTCTTATATAAGACTGAATC
RALTA_B0267 aceA2 -132 7.5 TCTTATGTCTTATATAAGACATAACC
RALTA_A2133 mdh -360 7.9 TCTTATGTCTTATATAAGACATATGA
RALTA_A2132 sdhR -254 7.9 TCATATGTCTTATATAAGACATAAGA
Ralstonia eutropha H16
H16_B0568 acnB -104 6.6 TCTTCACTCTTATATAAGATATAAGA
H16_B0568 acnB -97 5.8 TCTTATATAAGATATAAGACATTTGA
H16_A2227 aceA -128 5.2 TCTACACTCTTATATAAGACTCATGA
H16_A2211 aceA2 -132 6.1 TCTTATGTCTTATATAAGACTTTGCC
H16_A2634 mdh -379 7.9 TCTTATGTCTTATATAAGACATATGA
H16_A3056 icd -168 6.3 TCTTGTGTCTTATATAAGACTGAAGG
H16_A2633 sdhR -77 7.9 TCATATGTCTTATATAAGACATAAGA
Ralstonia eutropha JMP134
Reut_A2756 icd -158 5.8 TCTTGTGTCTTATATAAGACTGAAAG
Reut_A2326 sdhR -77 7.9 TCATATGTCTTATATAAGACATAAGA
Reut_A1961 aceA -124 5.4 CCTACACTCTTATATAAGACAAATGA
Reut_A0384 aceA2 -134 6.5 TCTTATGTCTTATATAAGACTGACGC
Reut_A2327 mdh -327 7.9 TCTTATGTCTTATATAAGACATATGA
Ralstonia metallidurans CH34
Rmet_2895 icd -167 5.2 TCTTGGGTCTTATATAAGACTGACAT
Rmet_3612 tam -56 6.3 TCTTATATCTTATATAAGACTAGAAT
Rmet_5296 acnB -130 5.8 TCTTATATAAGATATAAGACATTTGA
Rmet_5296 acnB -137 6.1 TATCGACTCTTATATAAGATATAAGA
Rmet_1385 aceA -129 5.7 TCTACACTCTTATATAAGACACATGA
Rmet_2488 sdhR -78 7.9 TCATATGTCTTATATAAGACATAAGA
Rmet_4737 aceA2 -134 6.1 TCTTATGTCTTATATAAGACCTTGCC
Rmet_2489 mdh -339 7.9 TCTTATGTCTTATATAAGACATATGA
Ralstonia pickettii 12J
Rpic_4479 acnB -127 5.8 TCTTATATAAGATATAAGACATTTGA
Rpic_4479 acnB -134 6.2 GTTTAACTCTTATATAAGATATAAGA
Rpic_4553 acnB -128 5.8 TCTTATATAAGATATAAGACATTTGA
Rpic_4553 acnB -135 6.2 GCTTGACTCTTATATAAGATATAAGA
Rpic_0542 aceA2 -135 6.2 TCTTATGTCTTATATAAGACCTTGCT
Rpic_2752 icd -194 5.5 TCTTGTGTCTTATATAAGAGTTGCGG
Rpic_4801 aceA2 -135 6.2 TCTTATGTCTTATATAAGACCTTGCT
Rpic_2153 mdh -298 7.7 TCTTATGTCTTATATAAGACAGAAGA
Rpic_1232 aceA -127 6.2 TCTACACTCTTATATAAGACATATGA
Rpic_2152 sdhR -80 7.7 TCTTCTGTCTTATATAAGACATAAGA
Ralstonia solanacearum GMI1000
RSc2490 icd -168 5.5 TCTTGTGTCTTATATAAGAGTTGCGG
RSc1358 aceA -104 6.2 TCTACACTCTTATATAAGACATATGA
RSc1998 mdh -296 7.7 TCTTATGTCTTATATAAGACAGAAGA
RS03565 sdhR -62 7.7 TCTTCTGTCTTATATAAGACATAAGA
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