Regulon of FadP in Ralstonia eutropha JMP134

Properties
Regulator type:	Transcription factor
TF locus tag:	Reut_A0445
Regulator family:	TetR
Regulation mode:
Biological process:	Fatty acid degradation
Effector:
Regulog:	FadP - Ralstonia
Statistics of regulated genes:
- Genes	35
- Operons	15
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 85 sites [see more]

Member of regulog collections

By trascription factor - FadP
By taxonomy - Ralstonia
By TF family - TetR
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -211 Score: 5.1 Sequence: AAGAACGACCGTTCCA Locus tag: Reut_A1262 Name: etfD Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
	Reut_A1262	etfD	Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Position: -97 Score: 5.5 Sequence: TAGTACGATCGTTCGA Locus tag: Reut_A2550 Name: etfB Funciton: Electron transfer flavoprotein, beta subunit Locus tag: Reut_A2549 Name: etfA Funciton: Electron transfer flavoprotein alpha subunit Locus tag: Reut_A2548 Name: acdH2 Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
	Reut_A2550	etfB	Electron transfer flavoprotein, beta subunit
	Reut_A2549	etfA	Electron transfer flavoprotein alpha subunit
	Reut_A2548	acdH2	Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -140 Score: 4.9 Sequence: CTGAACGACCGTTCTT Locus tag: Reut_A0445 Name: fadP Funciton: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family Locus tag: Reut_A0446 Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3) Locus tag: Reut_A0447 Name: acdB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Locus tag: Reut_A0448 Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Locus tag: Reut_A0449 Name: degV Funciton: conserved hypothetical protein, DegV family Locus tag: Reut_A0450 Name: echH Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
	Reut_A0445	fadP	Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
	Reut_A0446	acdH	Acyl-CoA dehydrogenase (EC 1.3.99.3)
	Reut_A0447	acdB	Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
	Reut_A0448	acdA	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
	Reut_A0449	degV	conserved hypothetical protein, DegV family
	Reut_A0450	echH	Enoyl-CoA hydratase (EC 4.2.1.17)
Position: -73 Score: 5.4 Sequence: TAGAACGATCGTTCGG Locus tag: Reut_A0823 Name: fadD2 Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	Reut_A0823	fadD2	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: 12 Score: 5.2 Sequence: TCGAACGACCGTTCAC Locus tag: Reut_A1419 Name: RSc1772 Funciton: Alpha/beta hydrolase fold-3 domain protein Locus tag: Reut_A1420 Name: h16_A1555 Funciton: conserved hypothetical protein, UPF0065 Locus tag: Reut_A1421 Name: Rsc1773 Funciton: putative 4-hydroxybenzoyl-CoA thioesterase
	Reut_A1419	RSc1772	Alpha/beta hydrolase fold-3 domain protein
	Reut_A1420	h16_A1555	conserved hypothetical protein, UPF0065
	Reut_A1421	Rsc1773	putative 4-hydroxybenzoyl-CoA thioesterase
Position: -203 Score: 5.5 Sequence: TTGAACGACCGTGCTA Locus tag: Reut_A1405 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Locus tag: Reut_A1406 Name: pncA Funciton: Nicotinamidase (EC 3.5.1.19) Locus tag: Reut_A1407 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) Locus tag: Reut_A1408 Name: acdH3 Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
	Reut_A1405	fadB	Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
	Reut_A1406	pncA	Nicotinamidase (EC 3.5.1.19)
	Reut_A1407	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	Reut_A1408	acdH3	Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -49 Score: 5.4 Sequence: TAGAACGACCGTTCGC Locus tag: Reut_A1097 Name: acsA Funciton: Acetyl-coenzyme A synthetase (EC 6.2.1.1)
	Reut_A1097	acsA	Acetyl-coenzyme A synthetase (EC 6.2.1.1)
Position: -58 Score: 5.2 Sequence: TCGAACGACCGTTCAT Locus tag: Reut_A0268 Name: nppD Funciton: 2-nitropropane dioxygenase NPD
	Reut_A0268	nppD	2-nitropropane dioxygenase NPD
Position: -32 Score: 4.9 Sequence: ACGAACGACCGTTCAC Locus tag: Reut_A0133 Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
	Reut_A0133	liuR	Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Position: -10 Score: 5.6 Sequence: TCGAACGACCGTGCTA Locus tag: Reut_A0190 Name: Rmet_0145 Funciton: TesB-like acyl-CoA thioesterase 2
	Reut_A0190	Rmet_0145	TesB-like acyl-CoA thioesterase 2
Position: -43 Score: 4.9 Sequence: ACGTACGATCGTGCTA Locus tag: Reut_A1010 Name: paaH1 Funciton: 3-hydroxybutyryl-CoA dehydrogenase, phenylacetic acid degradation Locus tag: Reut_A1009 Name: paaG4 Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) Locus tag: Reut_A1008 Name: BPSL1236 Funciton: Putative phosphoglycerate mutase Locus tag: Reut_A1007 Name: BPSL1235 Funciton: Phosphotransferase enzyme family protein
	Reut_A1010	paaH1	3-hydroxybutyryl-CoA dehydrogenase, phenylacetic acid degradation
	Reut_A1009	paaG4	Enoyl-CoA hydratase (EC 4.2.1.17)
	Reut_A1008	BPSL1236	Putative phosphoglycerate mutase
	Reut_A1007	BPSL1235	Phosphotransferase enzyme family protein
Position: -34 Score: 4.7 Sequence: TCGAACGACCATTCAG Locus tag: Reut_A2994 Name: fadD1 Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	Reut_A2994	fadD1	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -64 Score: 5.2 Sequence: TAGCACGACCGTTCAC Locus tag: Reut_A0977 Name: RSc2046 Funciton: conserved hypothetical protein, DUF1178 Locus tag: Reut_A0978 Name: acdQ Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.-) Locus tag: Reut_A0979 Name: acdP Funciton: acyl-CoA dehydrogenase domain protein Locus tag: Reut_A0980 Name: maoC Funciton: Putative (R)-specific enoyl-CoA hydratase, MaoC- like Locus tag: Reut_A0981 Name: echI Funciton: MaoC domain protein dehydratase
	Reut_A0977	RSc2046	conserved hypothetical protein, DUF1178
	Reut_A0978	acdQ	Acyl-CoA dehydrogenase (EC 1.3.99.-)
	Reut_A0979	acdP	acyl-CoA dehydrogenase domain protein
	Reut_A0980	maoC	Putative (R)-specific enoyl-CoA hydratase, MaoC- like
	Reut_A0981	echI	MaoC domain protein dehydratase
Position: -71 Score: 5.1 Sequence: AAGTACGATCGTTCGA Locus tag: Reut_A1353 Name: bktB Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) Locus tag: Reut_A1354 Name: RSc1638 Funciton: hypothetical protein
	Reut_A1353	bktB	3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	Reut_A1354	RSc1638	hypothetical protein
Position: -54 Score: 4.7 Sequence: TAGAACGGTTGTTCGT Locus tag: Reut_A1398 Name: alkK Funciton: Medium-chain-fatty-acid-CoA ligase
	Reut_A1398	alkK	Medium-chain-fatty-acid-CoA ligase

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of FadP in Ralstonia eutropha JMP134

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --