Regulon of LiuQ in Ralstonia eutropha JMP134
| Regulator type: | Transcription factor |
| TF locus tag: | Reut_A1468 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Branched-chain amino acid degradation |
| Effector: | |
| Regulog: | LiuQ - Ralstonia |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Ralstonia
- By trascription factor - LiuQ
- By TF family - TetR
- By pathway - Branched-chain amino acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -167
Score: 5 Sequence: TTGACCAACACTCAA
Position: -59
Score: 5.3 Sequence: TTGAGCTACGCTCAA
Locus tag: Reut_A1467
Name: null Funciton: AMP-dependent synthetase and ligase
Locus tag: Reut_A1466
Name: null Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Locus tag: Reut_A1465
Name: null Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Locus tag: Reut_A1464
Name: null Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
Locus tag: Reut_A1463
Name: null Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: Reut_A1462
Name: null Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) |
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AMP-dependent synthetase and ligase
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Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
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Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
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Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
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Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
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Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
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Position: -154
Score: 5.3 Sequence: TTGAGCGTAGCTCAA
Position: -46
Score: 5 Sequence: TTGAGTGTTGGTCAA
Locus tag: Reut_A1468
Name: null Funciton: Predicted branched-chain amino acid degradation regulator LiuQ, TetR family |
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Predicted branched-chain amino acid degradation regulator LiuQ, TetR family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |