Regulog IdeR - Clostridia-3

Properties
Regulator type:	Transcription factor
Regulator family:	DtxR
Regulation mode:	repressor
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 78 sites [see more]

Member of regulog collections

By taxonomy - Clostridia-3
By TF family - DtxR
By effector - Iron ion, (Fe2+)
By pathway - Iron homeostasis

Statistics of regulated genes
Genome	Genes	Operons
Blautia hansenii DSM 20583	6	2
Bacteroides pectinophilus ATCC 43243	8	3
Bryantella formatexigens DSM 14469	13	5
Clostridiales bacterium 1_7_47_FAA	17	8
Clostridium bolteae ATCC BAA-613	14	7
Clostridium nexile DSM 1787	15	5
Clostridium scindens ATCC 35704	10	5
Ruminococcus lactaris ATCC 29176	12	4
Ruminococcus gnavus ATCC 29149	14	5
Roseburia intestinalis L1-82	8	4
Eubacterium rectale ATCC 33656	9	5
Eubacterium eligens ATCC 27750	11	4
Dorea longicatena DSM 13814	12	4
Dorea formicigenerans ATCC 27755	2	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes															Function

CRON 1.
COG0426	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469	* Clostridiales bacterium 1_7_47_FAA Site: position = -105 score = 4.76479 sequence = TGAGTAAGTGTACACTAAATAA Gene: Cbac1_010100025382: flavodoxin	* Clostridium bolteae ATCC BAA-613 Site: position = -107 score = 5.43755 sequence = ATTATTAGTGTACACTAATTTA Gene: CLOBOL_00460: flavodoxin	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Ruminococcus lactaris ATCC 29176	Ruminococcus gnavus ATCC 29149	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755	flavodoxin

CRON 2.
RUMGNA_02766	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Ruminococcus lactaris ATCC 29176	* Ruminococcus gnavus ATCC 29149 Site: position = -93 score = 5.68954 sequence = ATGATTAGAATAAACTAATAAA Site: position = -36 score = 5.37837 sequence = ATAGTTAGCGAAAACTAACTTG Gene: RUMGNA_02766: hypothetical protein	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755	hypothetical protein
BRYFOR_03360	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Ruminococcus lactaris ATCC 29176	Ruminococcus gnavus ATCC 29149 Gene: RUMGNA_02767: hypothetical protein	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755	hypothetical protein
PF05031	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA	Clostridium bolteae ATCC BAA-613	* Clostridium nexile DSM 1787 Site: position = -63 score = 5.07371 sequence = CTGGTTAGTTTAATCTAACAAA Gene: CLONEX_02589: Iron transport-associated domain	Clostridium scindens ATCC 35704	Ruminococcus lactaris ATCC 29176	* Ruminococcus gnavus ATCC 29149 Site: position = -130 score = 4.33286 sequence = ATAAGTAGAATCTTCTAAAACA Gene: RUMGNA_02768: Iron transport-associated domain	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755	Iron transport-associated domain
PF11545	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787 Gene: CLONEX_02590: Cell surface heme-binding protein Shp	Clostridium scindens ATCC 35704	Ruminococcus lactaris ATCC 29176	Ruminococcus gnavus ATCC 29149 Gene: RUMGNA_02769: Cell surface heme-binding protein Shp	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755	Cell surface heme-binding protein Shp
COG0614	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787 Gene: CLONEX_02591: ABC-type Fe3+-hydroxamate transport system, periplasmic component	Clostridium scindens ATCC 35704	Ruminococcus lactaris ATCC 29176	Ruminococcus gnavus ATCC 29149 Gene: RUMGNA_02770: ABC-type Fe3+-hydroxamate transport system, periplasmic component	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755	ABC-type Fe3+-hydroxamate transport system, periplasmic component
COG0609	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787 Gene: CLONEX_02592: ABC-type Fe3+-siderophore transport system, permease component	Clostridium scindens ATCC 35704	Ruminococcus lactaris ATCC 29176	* Ruminococcus gnavus ATCC 29149 Site: position = -135 score = 4.29404 sequence = AACGATAAAGTGTACTATCTTA Gene: RUMGNA_02771: ABC-type Fe3+-siderophore transport system, permease component	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755	ABC-type Fe3+-siderophore transport system, permease component
COG1120	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787 Gene: CLONEX_02593: ABC-type Fe3+-siderophores transport systems, ATPase components	Clostridium scindens ATCC 35704	Ruminococcus lactaris ATCC 29176	Ruminococcus gnavus ATCC 29149 Gene: RUMGNA_02772: ABC-type Fe3+-siderophores transport systems, ATPase components	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755	ABC-type Fe3+-siderophores transport systems, ATPase components

CRON 3.
COG1132	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243	* Bryantella formatexigens DSM 14469 Site: position = -52 score = 4.96725 sequence = GGAGTTAGAAAATACTAACCCC Gene: BRYFOR_00595: ABC-type multidrug transport system, ATPase and permease components	* Clostridiales bacterium 1_7_47_FAA Site: position = -70 score = 4.47498 sequence = TTCGTTATAATACACTACAGTT Site: position = -54 score = 5.70479 sequence = ACAGTTAGTAAAATCTAACTAT Gene: Cbac1_010100028374: ABC-type multidrug transport system, ATPase and permease components	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787 Gene: CLONEX_00480: ABC-type multidrug transport system, ATPase and permease components	Clostridium scindens ATCC 35704 Gene: CLOSCI_00932: ABC-type multidrug transport system, ATPase and permease components	Ruminococcus lactaris ATCC 29176	Ruminococcus gnavus ATCC 29149	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814	* Dorea formicigenerans ATCC 27755 Site: position = -55 score = 4.76543 sequence = GTGGTTAGATTAAGCTAACCCA Gene: DORFOR_03080: ABC-type multidrug transport system, ATPase and permease components	ABC-type multidrug transport system, ATPase and permease components
COG1132-2	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469 Gene: BRYFOR_00594: ABC-type multidrug transport system, ATPase and permease components	Clostridiales bacterium 1_7_47_FAA Gene: Cbac1_010100028379: ABC-type multidrug transport system, ATPase and permease components	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787 Gene: CLONEX_00479: ABC-type multidrug transport system, ATPase and permease components	Clostridium scindens ATCC 35704 Gene: CLOSCI_00931: ABC-type multidrug transport system, ATPase and permease components	Ruminococcus lactaris ATCC 29176	Ruminococcus gnavus ATCC 29149	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755 Gene: DORFOR_03079: ABC-type multidrug transport system, ATPase and permease components	ABC-type multidrug transport system, ATPase and permease components

CRON 4.
ideR	Blautia hansenii DSM 20583 Gene: BLAHAN_01115: Predicted iron-dependent repressor, DtxR family	* Bacteroides pectinophilus ATCC 43243 Site: position = -135 score = 4.52534 sequence = ATGATTAAATTATGCTAAACAA Gene: BACPEC_02631: Predicted iron-dependent repressor, DtxR family	Bryantella formatexigens DSM 14469 Gene: BRYFOR_03605: Predicted iron-dependent repressor, DtxR family	* Clostridiales bacterium 1_7_47_FAA Site: position = -140 score = 4.54841 sequence = ATGGTTAGTTATTTCTAACTTC Gene: Cbac1_010100022172: Predicted iron-dependent repressor, DtxR family	3 Clostridium bolteae ATCC BAA-613* Site: position = -91 score = 4.29257 sequence = CAGATTAGCACTTTCTAACTCT Gene: CLOBOL_01420: Predicted iron-dependent repressor, DtxR family Site: position = -140 score = 5.22125 sequence = ATGTTTAGTGTATGCTATCTTT Gene: CLOBOL_05596: Predicted iron-dependent repressor, DtxR family Site: position = -193 score = 4.41924 sequence = AAAGTTATGGTATCCTAACTGC Gene: CLOBOL_00284: Predicted iron-dependent repressor, DtxR family	* Clostridium nexile DSM 1787 Site: position = -139 score = 6.02475 sequence = ATGGTTAGTATACTCTAACGTT Gene: CLONEX_01968: Predicted iron-dependent repressor, DtxR family	* Clostridium scindens ATCC 35704 Site: position = -161 score = 5.53778 sequence = GTAGTTAGTATATTCTCATCAT Gene: CLOSCI_00926: Predicted iron-dependent repressor, DtxR family	* Ruminococcus lactaris ATCC 29176 Site: position = -139 score = 4.13274 sequence = AATTATAACATAATCTATCAAT Gene: RUMLAC_02635: Predicted iron-dependent repressor, DtxR family	* Ruminococcus gnavus ATCC 29149 Site: position = -102 score = 6.10894 sequence = TTAGTTAGTATATTCTAACATT Gene: RUMGNA_03680: Predicted iron-dependent repressor, DtxR family	Roseburia intestinalis L1-82 Gene: ROSINTL182_00530: Predicted iron-dependent repressor, DtxR family	* Eubacterium rectale ATCC 33656 Site: position = -180 score = 5.78984 sequence = ATAGTTAGTATACACTAACGCG Gene: EUBREC_2328: Predicted iron-dependent repressor, DtxR family	Eubacterium eligens ATCC 27750 Gene: EUBELI_20503: Predicted iron-dependent repressor, DtxR family	* Dorea longicatena DSM 13814 Site: position = -156 score = 6.31362 sequence = ATAGTTAGTATATGCTAACGTT Gene: DORLON_00345: Predicted iron-dependent repressor, DtxR family	Dorea formicigenerans ATCC 27755 Gene: DORFOR_00462: Predicted iron-dependent repressor, DtxR family	Predicted iron-dependent repressor, DtxR family
PF00881	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA Gene: Cbac1_010100022167: Putative nitroreductase	Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_01421: Putative nitroreductase	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Ruminococcus lactaris ATCC 29176	Ruminococcus gnavus ATCC 29149	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755	Putative nitroreductase

CRON 5.
BACPEC_02635	Blautia hansenii DSM 20583	* Bacteroides pectinophilus ATCC 43243 Site: position = -72 score = 5.93918 sequence = GTAATTAGAATAAACTAACAAT Gene: BACPEC_02635: hypothetical protein	* Bryantella formatexigens DSM 14469 Site: position = -82 score = 6.22724 sequence = AATGTTAGCATATACTAACTTC Gene: BRYFOR_03558: hypothetical protein	* Clostridiales bacterium 1_7_47_FAA Site: position = -80 score = 4.3138 sequence = GCAGTTAGGATACCATAACTTT Gene: Cbac1_010100004977: hypothetical protein	* Clostridium bolteae ATCC BAA-613 Site: position = -81 score = 4.3138 sequence = GCAGTTAGGATACCATAACTTT Gene: CLOBOL_00283: hypothetical protein	* Clostridium nexile DSM 1787 Site: position = -65 score = 6.48145 sequence = AACGTTAGAGTATACTAACCAT Gene: CLONEX_01967: hypothetical protein	Clostridium scindens ATCC 35704 Gene: CLOSCI_00838: hypothetical protein	* Ruminococcus lactaris ATCC 29176 Site: position = -132 score = 5.99532 sequence = CACGTTAGCGTATACTAACTAA Gene: RUMLAC_01079: hypothetical protein	Ruminococcus gnavus ATCC 29149 Gene: RUMGNA_03678: hypothetical protein	* Roseburia intestinalis L1-82 Site: position = -71 score = 6.66813 sequence = AACGTTAGAATATACTAACCAA Gene: ROSINTL182_04350: hypothetical protein	* Eubacterium rectale ATCC 33656 Site: position = -130 score = 5.03819 sequence = AAAGTAAGAAAAATCTAAAAAA Site: position = -90 score = 5.41777 sequence = CACGTTAGAGTATACTAACACC Gene: EUBREC_1581: hypothetical protein	* Eubacterium eligens ATCC 27750 Site: position = -29 score = 5.78259 sequence = ACCATTAGAATATACTAACCGA Gene: EUBELI_00572: hypothetical protein	* Dorea longicatena DSM 13814 Site: position = -120 score = 6.73931 sequence = AACGTTAGCATATACTAACTAT Gene: DORLON_00346: hypothetical protein	Dorea formicigenerans ATCC 27755	hypothetical protein
feoA	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243 Gene: BACPEC_02636: Ferrous iron transport protein A	Bryantella formatexigens DSM 14469 Gene: BRYFOR_03559: Ferrous iron transport protein A	Clostridiales bacterium 1_7_47_FAA Gene: Cbac1_010100004972: Ferrous iron transport protein A	Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_00282: Ferrous iron transport protein A	Clostridium nexile DSM 1787 Gene: CLONEX_01966: Ferrous iron transport protein A	Clostridium scindens ATCC 35704 Gene: CLOSCI_00837: Ferrous iron transport protein A	Ruminococcus lactaris ATCC 29176 Gene: RUMLAC_01080: Ferrous iron transport protein A	Ruminococcus gnavus ATCC 29149 Gene: RUMGNA_03677: Ferrous iron transport protein A	Roseburia intestinalis L1-82 Gene: ROSINTL182_04349: Ferrous iron transport protein A	Eubacterium rectale ATCC 33656 Gene: EUBREC_1582: Ferrous iron transport protein A	Eubacterium eligens ATCC 27750 Gene: EUBELI_00573: Ferrous iron transport protein A	Dorea longicatena DSM 13814 Gene: DORLON_00347: Ferrous iron transport protein A	Dorea formicigenerans ATCC 27755	Ferrous iron transport protein A
feoB	* Blautia hansenii DSM 20583 Site: position = -38 score = 4.3916 sequence = TGAGTTAGCATGAACTAATTGA Gene: BLAHAN_00186: Ferrous iron transport protein B	Bacteroides pectinophilus ATCC 43243 Gene: BACPEC_02637: Ferrous iron transport protein B	Bryantella formatexigens DSM 14469 Gene: BRYFOR_03560: Ferrous iron transport protein B	Clostridiales bacterium 1_7_47_FAA Gene: Cbac1_010100004967: Ferrous iron transport protein B	2 Clostridium bolteae ATCC BAA-613* Gene: CLOBOL_00281: Ferrous iron transport protein B Site: position = -51 score = 4.96393 sequence = ATAGTTAGCGAAAGCTAATGAA Site: position = -31 score = 4.29449 sequence = AAAATAAGAAAAATATAACAAG Gene: CLOBOL_05594: Ferrous iron transport protein B	* Clostridium nexile DSM 1787 Site: position = -58 score = 4.90601 sequence = ATGGTTAGTTAAAACTAATAAA Gene: CLONEX_01965: Ferrous iron transport protein B	2 Clostridium scindens ATCC 35704* Site: position = -71 score = 6.14439 sequence = TACGTTAGTATATACTAATTAA Gene: CLOSCI_00924: Ferrous iron transport protein B Gene: CLOSCI_00836: Ferrous iron transport protein B	Ruminococcus lactaris ATCC 29176 Gene: RUMLAC_01081: Ferrous iron transport protein B	Ruminococcus gnavus ATCC 29149 Gene: RUMGNA_03676: Ferrous iron transport protein B	* Roseburia intestinalis L1-82 Site: position = -121 score = 4.97382 sequence = GGCGTTAGCAAATGCTAACAAA Gene: ROSINTL182_04347: Ferrous iron transport protein B	* Eubacterium rectale ATCC 33656 Site: position = -59 score = 5.39845 sequence = TAGGTTAGTAAATACAAACTAT Gene: EUBREC_1583: Ferrous iron transport protein B	* Eubacterium eligens ATCC 27750 Site: position = -89 score = 5.41503 sequence = CAGGTTAGCATAATCTAATTAA Gene: EUBELI_00574: Ferrous iron transport protein B	Dorea longicatena DSM 13814 Gene: DORLON_00348: Ferrous iron transport protein B	Dorea formicigenerans ATCC 27755	Ferrous iron transport protein B
BRYFOR_03561	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469 Gene: BRYFOR_03561: hypothetical protein	Clostridiales bacterium 1_7_47_FAA	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Ruminococcus lactaris ATCC 29176 Gene: RUMLAC_01082: hypothetical protein	Ruminococcus gnavus ATCC 29149	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814 Gene: DORLON_00349: hypothetical protein	Dorea formicigenerans ATCC 27755	hypothetical protein
RUMLAC_01083	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Ruminococcus lactaris ATCC 29176 Gene: RUMLAC_01083: hypothetical protein	Ruminococcus gnavus ATCC 29149	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814 Gene: DORLON_00350: hypothetical protein	Dorea formicigenerans ATCC 27755	hypothetical protein
CLOSCI_00923	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704 Gene: CLOSCI_00923: hypothetical protein	Ruminococcus lactaris ATCC 29176	Ruminococcus gnavus ATCC 29149	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814 Gene: DORLON_00351: hypothetical protein	Dorea formicigenerans ATCC 27755	hypothetical protein
DORLON_00352	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Ruminococcus lactaris ATCC 29176	Ruminococcus gnavus ATCC 29149	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814 Gene: DORLON_00352: hypothetical protein	Dorea formicigenerans ATCC 27755	hypothetical protein
BACPEC_03058	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243 Gene: BACPEC_03058: hypothetical protein	* Bryantella formatexigens DSM 14469 Site: position = -229 score = 4.72592 sequence = AAAAATAGCGTATACTAGTAAA Site: position = -209 score = 4.97723 sequence = AACGTTAGAGACTTCTAACTGT Gene: BRYFOR_00504: hypothetical protein	Clostridiales bacterium 1_7_47_FAA	Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_05591: hypothetical protein	Clostridium nexile DSM 1787 Gene: CLONEX_01962: hypothetical protein	* Clostridium scindens ATCC 35704 Site: position = -171 score = 4.43938 sequence = ACAGTTAGCATTGACTATCTGA Gene: CLOSCI_00921: hypothetical protein	Ruminococcus lactaris ATCC 29176 Gene: RUMLAC_01086: hypothetical protein	Ruminococcus gnavus ATCC 29149 Gene: RUMGNA_03672: hypothetical protein	Roseburia intestinalis L1-82 Gene: ROSINTL182_02495: hypothetical protein	* Eubacterium rectale ATCC 33656 Site: position = -53 score = 4.37003 sequence = CTTGTAAGTAAACTTTAACTAT Gene: EUBREC_1233: hypothetical protein	Eubacterium eligens ATCC 27750 Gene: EUBELI_00577: hypothetical protein	Dorea longicatena DSM 13814 Gene: DORLON_00353: hypothetical protein	Dorea formicigenerans ATCC 27755 Gene: DORFOR_03340: hypothetical protein	hypothetical protein
COG2217	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243 Gene: BACPEC_03059: Cation transporting ATPase	Bryantella formatexigens DSM 14469 Gene: BRYFOR_00503: Cation transporting ATPase	Clostridiales bacterium 1_7_47_FAA Gene: Cbac1_010100004947: Cation transporting ATPase	2 Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_05590: Cation transporting ATPase Gene: CLOBOL_00279: Cation transporting ATPase	Clostridium nexile DSM 1787 Gene: CLONEX_01961: Cation transporting ATPase	Clostridium scindens ATCC 35704 Gene: CLOSCI_00920: Cation transporting ATPase	Ruminococcus lactaris ATCC 29176 Gene: RUMLAC_01087: Cation transporting ATPase	Ruminococcus gnavus ATCC 29149 Gene: RUMGNA_03671: Cation transporting ATPase	Roseburia intestinalis L1-82 Gene: ROSINTL182_02493: Cation transporting ATPase	Eubacterium rectale ATCC 33656 Gene: EUBREC_1234: Cation transporting ATPase	Eubacterium eligens ATCC 27750 Gene: EUBELI_00578: Cation transporting ATPase	Dorea longicatena DSM 13814 Gene: DORLON_00354: Cation transporting ATPase	Dorea formicigenerans ATCC 27755 Gene: DORFOR_03339: Cation transporting ATPase	Cation transporting ATPase
BACPEC_02991	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469 Gene: BRYFOR_03562: hypothetical protein	Clostridiales bacterium 1_7_47_FAA Gene: Cbac1_010100004957: heavy metal transport/detoxification protein	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Ruminococcus lactaris ATCC 29176 Gene: RUMLAC_01084: hypothetical protein	Ruminococcus gnavus ATCC 29149	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755	hypothetical protein
fur	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243 Gene: BACPEC_02639: Transcriptional regulator for iron transport and metabolism, Fur family	Bryantella formatexigens DSM 14469	2 Clostridiales bacterium 1_7_47_FAA* Gene: Cbac1_010100004962: Transcriptional regulator for iron transport and metabolism, Fur family Site: position = -216 score = 5.21277 sequence = ATAGTTAGCGTAAACTTACTGA Site: position = -65 score = 4.27907 sequence = ATGGTTAGTCAAAACTATTTCA Gene: Cbac1_010100015165: Transcriptional regulator for iron transport and metabolism, Fur family	Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_05592: Transcriptional regulator for iron transport and metabolism, Fur family	Clostridium nexile DSM 1787 Gene: CLONEX_01963: Transcriptional regulator for iron transport and metabolism, Fur family	Clostridium scindens ATCC 35704 Gene: CLOSCI_00922: Transcriptional regulator for iron transport and metabolism, Fur family	Ruminococcus lactaris ATCC 29176 Gene: RUMLAC_01085: Transcriptional regulator for iron transport and metabolism, Fur family	* Ruminococcus gnavus ATCC 29149 Site: position = -85 score = 6.58007 sequence = AATGTTAGAATATACTAACTAA Gene: RUMGNA_03679: Transcriptional regulator for iron transport and metabolism, Fur family	Roseburia intestinalis L1-82 Gene: ROSINTL182_04345: Transcriptional regulator for iron transport and metabolism, Fur family	Eubacterium rectale ATCC 33656 Gene: EUBREC_1585: Transcriptional regulator for iron transport and metabolism, Fur family	Eubacterium eligens ATCC 27750 Gene: EUBELI_00576: Transcriptional regulator for iron transport and metabolism, Fur family	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755	Transcriptional regulator for iron transport and metabolism, Fur family
Cbac1_010100004952	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA Gene: Cbac1_010100004952: hypothetical protein	Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_00280: hypothetical protein	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Ruminococcus lactaris ATCC 29176	Ruminococcus gnavus ATCC 29149	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755	hypothetical protein
CLONEX_01964	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787 Gene: CLONEX_01964: hypothetical protein	Clostridium scindens ATCC 35704	Ruminococcus lactaris ATCC 29176	Ruminococcus gnavus ATCC 29149	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656 Gene: EUBREC_1584: hypothetical protein	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755	hypothetical protein
BACPEC_02638	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243 Gene: BACPEC_02638: hypothetical protein	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Ruminococcus lactaris ATCC 29176	Ruminococcus gnavus ATCC 29149	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755	hypothetical protein
EUBELI_00575	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Ruminococcus lactaris ATCC 29176	Ruminococcus gnavus ATCC 29149	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750 Gene: EUBELI_00575: hypothetical protein	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755	hypothetical protein
BLAHAN_00185	* Blautia hansenii DSM 20583 Site: position = -67 score = 6.35697 sequence = AAAATTAGTATAAACTAACTTT Gene: BLAHAN_00185: hypothetical protein	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA	* Clostridium bolteae ATCC BAA-613 Site: position = -210 score = 4.80816 sequence = GATGTTAGAAAAATATAACTAA Site: position = -104 score = 5.72593 sequence = AAAGATAGCATACACTAAACAT Gene: CLOBOL_05595: hypothetical protein	Clostridium nexile DSM 1787	* Clostridium scindens ATCC 35704 Site: position = -101 score = 5.80876 sequence = ATGATGAGAATATACTAACTAC Gene: CLOSCI_00925: hypothetical protein	Ruminococcus lactaris ATCC 29176	Ruminococcus gnavus ATCC 29149	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755	hypothetical protein
BLAHAN_00187	Blautia hansenii DSM 20583 Gene: BLAHAN_00187: hypothetical protein	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Ruminococcus lactaris ATCC 29176	Ruminococcus gnavus ATCC 29149	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755	hypothetical protein
BLAHAN_00188	Blautia hansenii DSM 20583 Gene: BLAHAN_00188: hypothetical protein	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Ruminococcus lactaris ATCC 29176	Ruminococcus gnavus ATCC 29149	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755	hypothetical protein
ROSINTL182_04346	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Ruminococcus lactaris ATCC 29176	Ruminococcus gnavus ATCC 29149	Roseburia intestinalis L1-82 Gene: ROSINTL182_04346: hypothetical protein	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755	hypothetical protein
CLOBOL_05593	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469	Clostridiales bacterium 1_7_47_FAA	Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_05593: hypothetical protein	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704	Ruminococcus lactaris ATCC 29176	Ruminococcus gnavus ATCC 29149	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755	hypothetical protein

CRON 6.
eno	Blautia hansenii DSM 20583 Gene: BLAHAN_03002: Enolase (EC 4.2.1.11)	Bacteroides pectinophilus ATCC 43243 Gene: BACPEC_02904: Enolase (EC 4.2.1.11)	2 Bryantella formatexigens DSM 14469* Site: position = -100 score = 5.56754 sequence = AAAGTTAGTTAAAACTAACTAA Gene: BRYFOR_03081: Enolase (EC 4.2.1.11) Gene: BRYFOR_04620: Enolase (EC 4.2.1.11)	2 Clostridiales bacterium 1_7_47_FAA* Site: position = -161 score = 5.17996 sequence = TTAGTTAGTAATAACTAACTTT Gene: Cbac1_010100004917: Enolase (EC 4.2.1.11) Gene: Cbac1_010100005852: Enolase (EC 4.2.1.11)	Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_03126: Enolase (EC 4.2.1.11)	Clostridium nexile DSM 1787 Gene: CLONEX_04118: Enolase (EC 4.2.1.11)	Clostridium scindens ATCC 35704 Gene: CLOSCI_04013: Enolase (EC 4.2.1.11)	* Ruminococcus lactaris ATCC 29176 Site: position = -107 score = 5.69582 sequence = ATGGTTAGTTAATACTAACTAT Gene: RUMLAC_01886: Enolase (EC 4.2.1.11)	2 Ruminococcus gnavus ATCC 29149* Gene: RUMGNA_00850: Enolase (EC 4.2.1.11) Site: position = -123 score = 4.65431 sequence = AAGGTTAGCGATAACTAACTGA Gene: RUMGNA_03923: Enolase (EC 4.2.1.11)	2 Roseburia intestinalis L1-82* Site: position = -55 score = 5.43867 sequence = ATAGTTAGACAAAACTAACAAT Gene: ROSINTL182_03016: Enolase (EC 4.2.1.11) Gene: ROSINTL182_01904: Enolase (EC 4.2.1.11)	* Eubacterium rectale ATCC 33656 Site: position = -112 score = 5.37156 sequence = TTAGTTAGATTAAACTAACTGT Gene: EUBREC_2823: Enolase (EC 4.2.1.11)	* Eubacterium eligens ATCC 27750 Site: position = -176 score = 4.30484 sequence = AATTTATGTGTATACAAACTAA Site: position = -55 score = 5.85776 sequence = AAAGTTAGAAGAAACTAACTTA Gene: EUBELI_01395: Enolase (EC 4.2.1.11)	2 Dorea longicatena DSM 13814* Gene: DORLON_02368: Enolase (EC 4.2.1.11) Site: position = -108 score = 4.35216 sequence = AAAGATATGATATGCTGACGAT Site: position = -88 score = 6.41058 sequence = ATAGTTAGAATAATCTAACTAT Gene: DORLON_00359: Enolase (EC 4.2.1.11)	Dorea formicigenerans ATCC 27755 Gene: DORFOR_02537: Enolase (EC 4.2.1.11)	Enolase (EC 4.2.1.11)

CRON 7.
BLAHAN_03142	Blautia hansenii DSM 20583 Gene: BLAHAN_03142: hypothetical protein	Bacteroides pectinophilus ATCC 43243	Bryantella formatexigens DSM 14469 Gene: BRYFOR_01111: hypothetical protein	Clostridiales bacterium 1_7_47_FAA	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787	* Clostridium scindens ATCC 35704 Site: position = -65 score = 4.37098 sequence = ATAGTTAGTCGCAACTAATAAT Gene: CLOSCI_00929: hypothetical protein	Ruminococcus lactaris ATCC 29176	Ruminococcus gnavus ATCC 29149	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750 Gene: EUBELI_00570: hypothetical protein	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755	hypothetical protein
COG0716	Blautia hansenii DSM 20583	Bacteroides pectinophilus ATCC 43243 Gene: BACPEC_02121: Flavodoxins	Bryantella formatexigens DSM 14469 Gene: BRYFOR_01112: Flavodoxins	Clostridiales bacterium 1_7_47_FAA Gene: Cbac1_010100027064: Flavodoxins	Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_03815: Flavodoxins	Clostridium nexile DSM 1787 Gene: CLONEX_01941: Flavodoxins	Clostridium scindens ATCC 35704 Gene: CLOSCI_00928: Flavodoxins	Ruminococcus lactaris ATCC 29176 Gene: RUMLAC_00864: Flavodoxins	Ruminococcus gnavus ATCC 29149 Gene: RUMGNA_03289: Flavodoxins	* Roseburia intestinalis L1-82 Site: position = -133 score = 4.49646 sequence = TACAAAAGCATATTCTATCATT Gene: ROSINTL182_04596: Flavodoxins	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750 Gene: EUBELI_00571: Flavodoxins	Dorea longicatena DSM 13814 Gene: DORLON_00358: Flavodoxins	Dorea formicigenerans ATCC 27755 Gene: DORFOR_00836: Flavodoxins	Flavodoxins
PF10087	* Blautia hansenii DSM 20583 Site: position = -99 score = 4.83286 sequence = GTAGTTAGTTAAAACTAATCAA Site: position = -38 score = 4.541 sequence = TAAGTTAGATAAGACTAATCAA Gene: BLAHAN_03143: Uncharacterized protein conserved in bacteria	Bacteroides pectinophilus ATCC 43243	* Bryantella formatexigens DSM 14469 Site: position = -166 score = 5.74223 sequence = ACAGTTAGCATAAGCTAACTTA Site: position = -99 score = 5.12557 sequence = TAGGTTAGGAAAAACTAACTTA Gene: BRYFOR_01110: Uncharacterized protein conserved in bacteria	* Clostridiales bacterium 1_7_47_FAA Site: position = -105 score = 5.77372 sequence = ATAGTTAGTCAATACTAACCAT Gene: Cbac1_010100005502: Uncharacterized protein conserved in bacteria	Clostridium bolteae ATCC BAA-613	Clostridium nexile DSM 1787	Clostridium scindens ATCC 35704 Gene: CLOSCI_00927: Uncharacterized protein conserved in bacteria	* Ruminococcus lactaris ATCC 29176 Site: position = -77 score = 5.01337 sequence = TGAGTTAGAAAAGACTAACTAA Gene: RUMLAC_01088: Uncharacterized protein conserved in bacteria	* Ruminococcus gnavus ATCC 29149 Site: position = -54 score = 4.65252 sequence = AAGGTTAGTTACAACTAACAAA Gene: RUMGNA_03652: Uncharacterized protein conserved in bacteria	Roseburia intestinalis L1-82	Eubacterium rectale ATCC 33656	* Eubacterium eligens ATCC 27750 Site: position = -112 score = 4.8897 sequence = ATAGTTAGTTAAAGCTAACTGA Gene: EUBELI_00569: Uncharacterized protein conserved in bacteria	* Dorea longicatena DSM 13814 Site: position = -48 score = 4.91131 sequence = TTAGTTAGATAAAGCTAACTAA Gene: DORLON_00403: Uncharacterized protein conserved in bacteria	Dorea formicigenerans ATCC 27755 Gene: DORFOR_00835: Uncharacterized protein conserved in bacteria	Uncharacterized protein conserved in bacteria
BACPEC_02120	Blautia hansenii DSM 20583	* Bacteroides pectinophilus ATCC 43243 Site: position = -44 score = 4.80638 sequence = AAGGTTAGTTATAACTAACTAA Gene: BACPEC_02120: hypothetical protein	Bryantella formatexigens DSM 14469	* Clostridiales bacterium 1_7_47_FAA Site: position = -54 score = 5.08201 sequence = TAGGTTAGCTTAAACTAACTGA Gene: Cbac1_010100027059: hypothetical protein	Clostridium bolteae ATCC BAA-613 Gene: CLOBOL_03816: hypothetical protein	* Clostridium nexile DSM 1787 Site: position = -32 score = 4.86272 sequence = TAAGTTAGAAATAACTAACTCA Gene: CLONEX_01942: hypothetical protein	Clostridium scindens ATCC 35704	Ruminococcus lactaris ATCC 29176	Ruminococcus gnavus ATCC 29149	* Roseburia intestinalis L1-82 Site: position = -89 score = 6.19891 sequence = AAAGTTAGTGTAATCTAACTAT Site: position = -24 score = 5.3978 sequence = GGAGTTAGGATAAACTAACTAT Gene: ROSINTL182_04597: hypothetical protein	Eubacterium rectale ATCC 33656	Eubacterium eligens ATCC 27750	Dorea longicatena DSM 13814	Dorea formicigenerans ATCC 27755	hypothetical protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog IdeR - Clostridia-3

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --