Regulon of IdeR in Clostridium scindens ATCC 35704

Properties
Regulator type:	Transcription factor
TF locus tag:	CLOSCI_00926
Regulator family:	DtxR
Regulation mode:	repressor
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Regulog:	IdeR - Clostridia-3
Statistics of regulated genes:
- Genes	10
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 78 sites [see more]

Member of regulog collections

By taxonomy - Clostridia-3
By TF family - DtxR
By effector - Iron ion, (Fe2+)
By pathway - Iron homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -171 Score: 4.4 Sequence: ACAGTTAGCATTGACTATCTGA Locus tag: CLOSCI_00921 Name: null Funciton: hypothetical protein Locus tag: CLOSCI_00920 Name: COG2217 Funciton: Cation transporting ATPase
	CLOSCI_00921		hypothetical protein
	CLOSCI_00920	COG2217	Cation transporting ATPase
Position: -71 Score: 6.1 Sequence: TACGTTAGTATATACTAATTAA Locus tag: CLOSCI_00924 Name: feoB Funciton: Ferrous iron transport protein B Locus tag: CLOSCI_00923 Name: null Funciton: hypothetical protein Locus tag: CLOSCI_00922 Name: fur Funciton: Transcriptional regulator for iron transport and metabolism, Fur family
	CLOSCI_00924	feoB	Ferrous iron transport protein B
	CLOSCI_00923		hypothetical protein
	CLOSCI_00922	fur	Transcriptional regulator for iron transport and metabolism, Fur family
Position: -101 Score: 5.8 Sequence: ATGATGAGAATATACTAACTAC Locus tag: CLOSCI_00925 Name: null Funciton: hypothetical protein
	CLOSCI_00925		hypothetical protein
Position: -65 Score: 4.4 Sequence: ATAGTTAGTCGCAACTAATAAT Locus tag: CLOSCI_00929 Name: null Funciton: hypothetical protein Locus tag: CLOSCI_00928 Name: COG0716 Funciton: Flavodoxins Locus tag: CLOSCI_00927 Name: PF10087 Funciton: Uncharacterized protein conserved in bacteria
	CLOSCI_00929		hypothetical protein
	CLOSCI_00928	COG0716	Flavodoxins
	CLOSCI_00927	PF10087	Uncharacterized protein conserved in bacteria
Position: -161 Score: 5.5 Sequence: GTAGTTAGTATATTCTCATCAT Locus tag: CLOSCI_00926 Name: ideR Funciton: Predicted iron-dependent repressor, DtxR family
	CLOSCI_00926	ideR	Predicted iron-dependent repressor, DtxR family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD