Profile of regulator IdeR in Clostridia-3
| Regulator family: | DtxR |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Regulog: | IdeR - Clostridia-3 |
Member of regulog collections
- By taxonomy - Clostridia-3
- By TF family - DtxR
- By effector - Iron ion, (Fe2+)
- By pathway - Iron homeostasis
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Blautia hansenii DSM 20583 | |||||
| BLAHAN_00185 | null | -67 | 6.4 | AAAATTAGTATAAACTAACTTT | |
| BLAHAN_00186 | feoB | -38 | 4.4 | TGAGTTAGCATGAACTAATTGA | |
| BLAHAN_03143 | PF10087 | -99 | 4.8 | GTAGTTAGTTAAAACTAATCAA | |
| BLAHAN_03143 | PF10087 | -38 | 4.5 | TAAGTTAGATAAGACTAATCAA | |
| Bacteroides pectinophilus ATCC 43243 | |||||
| BACPEC_02631 | ideR | -135 | 4.5 | ATGATTAAATTATGCTAAACAA | |
| BACPEC_02635 | null | -72 | 5.9 | GTAATTAGAATAAACTAACAAT | |
| BACPEC_02120 | null | -44 | 4.8 | AAGGTTAGTTATAACTAACTAA | |
| Bryantella formatexigens DSM 14469 | |||||
| BRYFOR_00504 | null | -229 | 4.7 | AAAAATAGCGTATACTAGTAAA | |
| BRYFOR_00504 | null | -209 | 5 | AACGTTAGAGACTTCTAACTGT | |
| BRYFOR_03558 | null | -82 | 6.2 | AATGTTAGCATATACTAACTTC | |
| BRYFOR_01110 | PF10087 | -166 | 5.7 | ACAGTTAGCATAAGCTAACTTA | |
| BRYFOR_01110 | PF10087 | -99 | 5.1 | TAGGTTAGGAAAAACTAACTTA | |
| BRYFOR_03081 | eno | -100 | 5.6 | AAAGTTAGTTAAAACTAACTAA | |
| BRYFOR_00595 | COG1132 | -52 | 5 | GGAGTTAGAAAATACTAACCCC | |
| Clostridiales bacterium 1_7_47_FAA | |||||
| Cbac1_010100022172 | ideR | -140 | 4.5 | ATGGTTAGTTATTTCTAACTTC | |
| Cbac1_010100004977 | null | -80 | 4.3 | GCAGTTAGGATACCATAACTTT | |
| Cbac1_010100015165 | fur | -216 | 5.2 | ATAGTTAGCGTAAACTTACTGA | |
| Cbac1_010100015165 | fur | -65 | 4.3 | ATGGTTAGTCAAAACTATTTCA | |
| Cbac1_010100005502 | PF10087 | -105 | 5.8 | ATAGTTAGTCAATACTAACCAT | |
| Cbac1_010100027059 | null | -54 | 5.1 | TAGGTTAGCTTAAACTAACTGA | |
| Cbac1_010100004917 | eno | -161 | 5.2 | TTAGTTAGTAATAACTAACTTT | |
| Cbac1_010100028374 | COG1132 | -70 | 4.5 | TTCGTTATAATACACTACAGTT | |
| Cbac1_010100028374 | COG1132 | -54 | 5.7 | ACAGTTAGTAAAATCTAACTAT | |
| Cbac1_010100025382 | COG0426 | -105 | 4.8 | TGAGTAAGTGTACACTAAATAA | |
| Clostridium bolteae ATCC BAA-613 | |||||
| CLOBOL_01420 | ideR | -91 | 4.3 | CAGATTAGCACTTTCTAACTCT | |
| CLOBOL_05596 | ideR | -140 | 5.2 | ATGTTTAGTGTATGCTATCTTT | |
| CLOBOL_00284 | ideR | -193 | 4.4 | AAAGTTATGGTATCCTAACTGC | |
| CLOBOL_05595 | null | -210 | 4.8 | GATGTTAGAAAAATATAACTAA | |
| CLOBOL_05595 | null | -104 | 5.7 | AAAGATAGCATACACTAAACAT | |
| CLOBOL_05594 | feoB | -51 | 5 | ATAGTTAGCGAAAGCTAATGAA | |
| CLOBOL_05594 | feoB | -31 | 4.3 | AAAATAAGAAAAATATAACAAG | |
| CLOBOL_00283 | null | -81 | 4.3 | GCAGTTAGGATACCATAACTTT | |
| CLOBOL_00460 | COG0426 | -107 | 5.4 | ATTATTAGTGTACACTAATTTA | |
| Clostridium nexile DSM 1787 | |||||
| CLONEX_01968 | ideR | -139 | 6 | ATGGTTAGTATACTCTAACGTT | |
| CLONEX_01967 | null | -65 | 6.5 | AACGTTAGAGTATACTAACCAT | |
| CLONEX_01965 | feoB | -58 | 4.9 | ATGGTTAGTTAAAACTAATAAA | |
| CLONEX_01942 | null | -32 | 4.9 | TAAGTTAGAAATAACTAACTCA | |
| CLONEX_02589 | PF05031 | -63 | 5.1 | CTGGTTAGTTTAATCTAACAAA | |
| Clostridium scindens ATCC 35704 | |||||
| CLOSCI_00926 | ideR | -161 | 5.5 | GTAGTTAGTATATTCTCATCAT | |
| CLOSCI_00925 | null | -101 | 5.8 | ATGATGAGAATATACTAACTAC | |
| CLOSCI_00924 | feoB | -71 | 6.1 | TACGTTAGTATATACTAATTAA | |
| CLOSCI_00921 | null | -171 | 4.4 | ACAGTTAGCATTGACTATCTGA | |
| CLOSCI_00929 | null | -65 | 4.4 | ATAGTTAGTCGCAACTAATAAT | |
| Ruminococcus lactaris ATCC 29176 | |||||
| RUMLAC_02635 | ideR | -139 | 4.1 | AATTATAACATAATCTATCAAT | |
| RUMLAC_01079 | null | -132 | 6 | CACGTTAGCGTATACTAACTAA | |
| RUMLAC_01088 | PF10087 | -77 | 5 | TGAGTTAGAAAAGACTAACTAA | |
| RUMLAC_01886 | eno | -107 | 5.7 | ATGGTTAGTTAATACTAACTAT | |
| Ruminococcus gnavus ATCC 29149 | |||||
| RUMGNA_03680 | ideR | -102 | 6.1 | TTAGTTAGTATATTCTAACATT | |
| RUMGNA_03679 | fur | -85 | 6.6 | AATGTTAGAATATACTAACTAA | |
| RUMGNA_03652 | PF10087 | -54 | 4.7 | AAGGTTAGTTACAACTAACAAA | |
| RUMGNA_03923 | eno | -123 | 4.7 | AAGGTTAGCGATAACTAACTGA | |
| RUMGNA_02766 | null | -93 | 5.7 | ATGATTAGAATAAACTAATAAA | |
| RUMGNA_02766 | null | -36 | 5.4 | ATAGTTAGCGAAAACTAACTTG | |
| RUMGNA_02768 | PF05031 | -130 | 4.3 | ATAAGTAGAATCTTCTAAAACA | |
| RUMGNA_02771 | COG0609 | -135 | 4.3 | AACGATAAAGTGTACTATCTTA | |
| Roseburia intestinalis L1-82 | |||||
| ROSINTL182_04350 | null | -71 | 6.7 | AACGTTAGAATATACTAACCAA | |
| ROSINTL182_04347 | feoB | -121 | 5 | GGCGTTAGCAAATGCTAACAAA | |
| ROSINTL182_04597 | null | -89 | 6.2 | AAAGTTAGTGTAATCTAACTAT | |
| ROSINTL182_04597 | null | -24 | 5.4 | GGAGTTAGGATAAACTAACTAT | |
| ROSINTL182_04596 | COG0716 | -133 | 4.5 | TACAAAAGCATATTCTATCATT | |
| ROSINTL182_03016 | eno | -55 | 5.4 | ATAGTTAGACAAAACTAACAAT | |
| Eubacterium rectale ATCC 33656 | |||||
| EUBREC_2328 | ideR | -180 | 5.8 | ATAGTTAGTATACACTAACGCG | |
| EUBREC_1581 | null | -130 | 5 | AAAGTAAGAAAAATCTAAAAAA | |
| EUBREC_1581 | null | -90 | 5.4 | CACGTTAGAGTATACTAACACC | |
| EUBREC_1583 | feoB | -59 | 5.4 | TAGGTTAGTAAATACAAACTAT | |
| EUBREC_1233 | null | -53 | 4.4 | CTTGTAAGTAAACTTTAACTAT | |
| EUBREC_2823 | eno | -112 | 5.4 | TTAGTTAGATTAAACTAACTGT | |
| Eubacterium eligens ATCC 27750 | |||||
| EUBELI_00572 | null | -29 | 5.8 | ACCATTAGAATATACTAACCGA | |
| EUBELI_00574 | feoB | -89 | 5.4 | CAGGTTAGCATAATCTAATTAA | |
| EUBELI_00569 | PF10087 | -112 | 4.9 | ATAGTTAGTTAAAGCTAACTGA | |
| EUBELI_01395 | eno | -176 | 4.3 | AATTTATGTGTATACAAACTAA | |
| EUBELI_01395 | eno | -55 | 5.9 | AAAGTTAGAAGAAACTAACTTA | |
| Dorea longicatena DSM 13814 | |||||
| DORLON_00345 | ideR | -156 | 6.3 | ATAGTTAGTATATGCTAACGTT | |
| DORLON_00346 | null | -120 | 6.7 | AACGTTAGCATATACTAACTAT | |
| DORLON_00403 | PF10087 | -48 | 4.9 | TTAGTTAGATAAAGCTAACTAA | |
| DORLON_00359 | eno | -108 | 4.4 | AAAGATATGATATGCTGACGAT | |
| DORLON_00359 | eno | -88 | 6.4 | ATAGTTAGAATAATCTAACTAT | |
| Dorea formicigenerans ATCC 27755 | |||||
| DORFOR_03080 | COG1132 | -55 | 4.8 | GTGGTTAGATTAAGCTAACCCA | |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |