Regulon of IdeR in Bryantella formatexigens DSM 14469
| Regulator type: | Transcription factor |
| TF locus tag: | BRYFOR_03605 |
| Regulator family: | DtxR |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Regulog: | IdeR - Clostridia-3 |
| Statistics of regulated genes: | |
| - Genes | 13 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-3
- By TF family - DtxR
- By effector - Iron ion, (Fe2+)
- By pathway - Iron homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -52
Score: 5 Sequence: GGAGTTAGAAAATACTAACCCC
Locus tag: BRYFOR_00595
Name: COG1132 Funciton: ABC-type multidrug transport system, ATPase and permease components
Locus tag: BRYFOR_00594
Name: COG1132-2 Funciton: ABC-type multidrug transport system, ATPase and permease components |
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COG1132
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ABC-type multidrug transport system, ATPase and permease components
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COG1132-2
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ABC-type multidrug transport system, ATPase and permease components
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Position: -82
Score: 6.2 Sequence: AATGTTAGCATATACTAACTTC
Locus tag: BRYFOR_03558
Name: null Funciton: hypothetical protein
Locus tag: BRYFOR_03559
Name: feoA Funciton: Ferrous iron transport protein A
Locus tag: BRYFOR_03560
Name: feoB Funciton: Ferrous iron transport protein B
Locus tag: BRYFOR_03561
Name: null Funciton: hypothetical protein
Locus tag: BRYFOR_03562
Name: null Funciton: hypothetical protein |
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hypothetical protein
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feoA
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Ferrous iron transport protein A
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feoB
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Ferrous iron transport protein B
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hypothetical protein
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hypothetical protein
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Position: -229
Score: 4.7 Sequence: AAAAATAGCGTATACTAGTAAA
Position: -209
Score: 5 Sequence: AACGTTAGAGACTTCTAACTGT
Locus tag: BRYFOR_00504
Name: null Funciton: hypothetical protein
Locus tag: BRYFOR_00503
Name: COG2217 Funciton: Cation transporting ATPase |
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hypothetical protein
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COG2217
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Cation transporting ATPase
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Position: -166
Score: 5.7 Sequence: ACAGTTAGCATAAGCTAACTTA
Position: -99
Score: 5.1 Sequence: TAGGTTAGGAAAAACTAACTTA
Locus tag: BRYFOR_01110
Name: PF10087 Funciton: Uncharacterized protein conserved in bacteria
Locus tag: BRYFOR_01111
Name: null Funciton: hypothetical protein
Locus tag: BRYFOR_01112
Name: COG0716 Funciton: Flavodoxins |
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PF10087
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Uncharacterized protein conserved in bacteria
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hypothetical protein
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COG0716
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Flavodoxins
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Position: -100
Score: 5.6 Sequence: AAAGTTAGTTAAAACTAACTAA
Locus tag: BRYFOR_03081
Name: eno Funciton: Enolase (EC 4.2.1.11) |
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eno
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Enolase (EC 4.2.1.11)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |